Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0467
         (679 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81562-3|CAB04557.1|  352|Caenorhabditis elegans Hypothetical pr...    28   5.3  
AC024798-12|AAK29920.2| 1725|Caenorhabditis elegans Hypothetical...    28   5.3  
Z81016-6|CAB02667.1| 1573|Caenorhabditis elegans Hypothetical pr...    27   9.3  
Z48621-13|CAA88549.1| 1573|Caenorhabditis elegans Hypothetical p...    27   9.3  

>Z81562-3|CAB04557.1|  352|Caenorhabditis elegans Hypothetical
           protein K03D7.6 protein.
          Length = 352

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = -2

Query: 459 HIFCGLLDFFTSTTCLV 409
           H+FC LLD F  T C V
Sbjct: 70  HLFCALLDLFLCTVCTV 86


>AC024798-12|AAK29920.2| 1725|Caenorhabditis elegans Hypothetical
            protein Y48G9A.1 protein.
          Length = 1725

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = +3

Query: 219  RPVPILYDTVLATLYTNDFLDQ*ITSCNKIQI 314
            R +P + D +LA   TND  D  I SC K+ I
Sbjct: 1169 RQLPKVLDALLAACETNDESDPMIESCEKVVI 1200


>Z81016-6|CAB02667.1| 1573|Caenorhabditis elegans Hypothetical
           protein F21G4.2 protein.
          Length = 1573

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 10/20 (50%), Positives = 16/20 (80%)
 Frame = +2

Query: 14  IDFIPCLAFWIYFYICCMFK 73
           ID+  C+AF+I+F+ CC F+
Sbjct: 175 IDYPRCIAFFIWFF-CCAFE 193


>Z48621-13|CAA88549.1| 1573|Caenorhabditis elegans Hypothetical
           protein F21G4.2 protein.
          Length = 1573

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 10/20 (50%), Positives = 16/20 (80%)
 Frame = +2

Query: 14  IDFIPCLAFWIYFYICCMFK 73
           ID+  C+AF+I+F+ CC F+
Sbjct: 175 IDYPRCIAFFIWFF-CCAFE 193


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,368,524
Number of Sequences: 27780
Number of extensions: 316738
Number of successful extensions: 882
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 841
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 881
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1539654388
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)