Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0465
(599 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_21167| Best HMM Match : KH_1 (HMM E-Value=0) 163 1e-40
SB_24937| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_27288| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.18
SB_3277| Best HMM Match : KH_1 (HMM E-Value=4.3e-30) 33 0.23
SB_25863| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.54
SB_30824| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_2738| Best HMM Match : KH_1 (HMM E-Value=0.087) 29 3.8
SB_13208| Best HMM Match : ThiS (HMM E-Value=1.6) 29 3.8
SB_2557| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_26137| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.27) 28 6.6
SB_9147| Best HMM Match : Sushi (HMM E-Value=0) 28 6.6
SB_11346| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
SB_45073| Best HMM Match : ERM (HMM E-Value=0) 27 8.8
SB_36536| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
SB_235| Best HMM Match : Ribosomal_L7Ae (HMM E-Value=3.9e-15) 27 8.8
>SB_21167| Best HMM Match : KH_1 (HMM E-Value=0)
Length = 1650
Score = 163 bits (396), Expect = 1e-40
Identities = 86/189 (45%), Positives = 118/189 (62%), Gaps = 8/189 (4%)
Frame = +1
Query: 52 GPKECIEVAKARINEIIEDLEAKVTIECVIPQRHHRTVMGARGAKVKDITAEFDVQIKFP 231
G KEC+E A+ R+ EI+++LE+ VTIECVIPQ HR +MGA+GA V+++TA VQIKFP
Sbjct: 804 GAKECVEGARQRVMEIVQELESMVTIECVIPQEFHRNIMGAKGANVQEVTARHKVQIKFP 863
Query: 232 ERDTTEGADV---PGRDIDENA--EPGPNDIIKITGRPENCEGAKKALLEQVPITIDVEV 396
+R V G +D A P DII ITG+ E+ E AK LL+ VP+T + +
Sbjct: 864 DRSPAGEEPVVNGDGEHLDPEAPISPRKRDIIIITGKKESAEAAKIDLLDLVPVTEQMHI 923
Query: 397 PNELHRLLXGQKR---RELMQTYDVHXLLPPNEDTSDIVKVTGTPTSVENAKQALTEKIA 567
P + HR + G K R++M + V+ +PP +D SD V V G +VE A +AL K+A
Sbjct: 924 PFDYHRFVIGPKGSNVRKMMDEFSVNISIPPAKDESDSVSVIGPRANVERAMKALEAKVA 983
Query: 568 EMEKEKEDR 594
E+E E EDR
Sbjct: 984 EIEAENEDR 992
Score = 75.4 bits (177), Expect = 3e-14
Identities = 47/163 (28%), Positives = 80/163 (49%), Gaps = 9/163 (5%)
Frame = +1
Query: 4 ISFPRQGVNSDRVVLKGPKECIEVAKARINEIIEDLE-AKVTIECVIPQRHHRTVMGARG 180
I FP +G NSD+V+++GPK+ +E AK ++ E+ + E T+E HHR ++G G
Sbjct: 694 IKFPPEGSNSDKVLIRGPKDDVEKAKKQLLELTNEKELGSYTVEIRAKPEHHRFLIGRGG 753
Query: 181 AKVKDITAEFDVQIKFPERDTTEGADVPGRDIDENAEPGPNDI---IKITGRPENCEGAK 351
A ++ + +I FP + + E E +++ IK G E EGA+
Sbjct: 754 ASIRKVRENTGARIVFPAAKDEDKELITIIGKQEAVEAAKDELLKSIKDLGAKECVEGAR 813
Query: 352 KALLEQVP-----ITIDVEVPNELHRLLXGQKRRELMQTYDVH 465
+ ++E V +TI+ +P E HR + G K + + H
Sbjct: 814 QRVMEIVQELESMVTIECVIPQEFHRNIMGAKGANVQEVTARH 856
Score = 62.9 bits (146), Expect = 2e-10
Identities = 51/187 (27%), Positives = 90/187 (48%), Gaps = 7/187 (3%)
Frame = +1
Query: 34 DRVVLKGPKECIEVAKARINEIIEDLEAKVTIECVIPQRHHRTVMGARGAKVKDITAEFD 213
D +++ G KE E AK + +++ VT + IP +HR V+G +G+ V+ + EF
Sbjct: 893 DIIIITGKKESAEAAKIDLLDLVP-----VTEQMHIPFDYHRFVIGPKGSNVRKMMDEFS 947
Query: 214 VQIKFPE-RDTTEGADVPGRDIDENAEPGPNDIIKITGRPENCEGAKKALLEQVPITIDV 390
V I P +D ++ V G N E + E E +AL +DV
Sbjct: 948 VNISIPPAKDESDSVSVIGPRA--NVERAMKALEAKVAEIE-AENEDRALRS---FKMDV 1001
Query: 391 EVPNELHRLLXGQKRR---ELMQTYDVHXLLPPN---EDTSDIVKVTGTPTSVENAKQAL 552
+V + H + G+K + + + YDV+ PP E+++D++ +TG S E A+ A+
Sbjct: 1002 KVDRQYHPKIIGRKGQVITNIRKQYDVNIQFPPQDAPEESADVIGLTGYQHSCEAARDAI 1061
Query: 553 TEKIAEM 573
+ + E+
Sbjct: 1062 LKIVKEL 1068
Score = 61.3 bits (142), Expect = 6e-10
Identities = 48/194 (24%), Positives = 87/194 (44%), Gaps = 4/194 (2%)
Frame = +1
Query: 4 ISFPRQGVNSDRVVLKGPKECIEVAKARINEIIEDLEAK-VTIECVIPQRHHRTVMGARG 180
I+ P VN D + + G K+ + AKA I EI ED + K T+ + + H+ ++G RG
Sbjct: 298 INIPPPSVNKDELTVAGEKDGVAQAKAMILEIYEDKKRKTTTVSIEVRKSQHKYIVGPRG 357
Query: 181 AKVKDITAEFDVQIKFPERDTTEGADVPGRDIDENAEPGPNDIIKITGRPENCEGAKKAL 360
+ +I V ++ P D+ ++ I + G + A +
Sbjct: 358 GTIHEILELTGVSVEMPPSDS------------------DSETITLRGEQDKLGVALTQV 399
Query: 361 LEQVPITIDVEV--PNELHRLLXGQKRRELMQ-TYDVHXLLPPNEDTSDIVKVTGTPTSV 531
E+ + EV P LHR + G++ + + + T D+ + D D + + G P V
Sbjct: 400 YEKANSVVFAEVAAPRWLHRFIIGRRGQNIRKVTQDLPKVHVEFSDEKDSITLEGPPEQV 459
Query: 532 ENAKQALTEKIAEM 573
E+A+++L I E+
Sbjct: 460 ESARESLEAFIREL 473
Score = 54.4 bits (125), Expect = 7e-08
Identities = 48/167 (28%), Positives = 74/167 (44%), Gaps = 9/167 (5%)
Frame = +1
Query: 103 EDLEAKVTIECVIPQRHHRTVMGARGAKVKDITAEFDVQIKFPERDTTEGADVPGRDIDE 282
E + A I+ I ++ H+ V+G G +K I E D +I+ P EG+D
Sbjct: 582 EMVAANYCIDVPIFKQFHKNVIGRGGTTIKKIREETDTKIELP----AEGSD-------- 629
Query: 283 NAEPGPNDIIKITGRPENCEGAKKALL----EQVPIT-IDVEVPNELHRLLXGQKRRELM 447
+D+I ITG E A++ +L E +T ++V +P++ H + G K R +
Sbjct: 630 ------SDVIIITGHKAQVEAAREKILAIQNELANVTQLEVHIPSKFHNSIIGAKGRLIR 683
Query: 448 QTYD----VHXLLPPNEDTSDIVKVTGTPTSVENAKQALTEKIAEME 576
+ V PP SD V + G VE AK+ L E E E
Sbjct: 684 SVMEDCGGVSIKFPPEGSNSDKVLIRGPKDDVEKAKKQLLELTNEKE 730
Score = 48.0 bits (109), Expect = 6e-06
Identities = 39/159 (24%), Positives = 77/159 (48%), Gaps = 8/159 (5%)
Frame = +1
Query: 4 ISFPRQGVNSDRVVLKGPKECIEVAKARINEIIEDLEAK--------VTIECVIPQRHHR 159
IS P SD V + GP+ +E A + + ++EA+ ++ + +++H
Sbjct: 950 ISIPPAKDESDSVSVIGPRANVERAMKALEAKVAEIEAENEDRALRSFKMDVKVDRQYHP 1009
Query: 160 TVMGARGAKVKDITAEFDVQIKFPERDTTEGADVPGRDIDENAEPGPNDIIKITGRPENC 339
++G +G + +I ++DV I+FP +D E E+A D+I +TG +C
Sbjct: 1010 KIIGRKGQVITNIRKQYDVNIQFPPQDAPE----------ESA-----DVIGLTGYQHSC 1054
Query: 340 EGAKKALLEQVPITIDVEVPNELHRLLXGQKRRELMQTY 456
E A+ A+L+ V + V + + + Q++R+L +
Sbjct: 1055 EAARDAILKIVKELVRPSVQSACNTEI--QQQRQLHMAF 1091
Score = 42.3 bits (95), Expect = 3e-04
Identities = 17/56 (30%), Positives = 34/56 (60%)
Frame = +1
Query: 112 EAKVTIECVIPQRHHRTVMGARGAKVKDITAEFDVQIKFPERDTTEGADVPGRDID 279
E +V++E I R HR ++GA+G V+ + ++ V I+FP ++ + + G++ D
Sbjct: 1110 EDQVSVELTIDPRIHRRLIGAKGRAVRKLMEQYKVDIRFPRQNANDPVVISGQEQD 1165
Score = 39.9 bits (89), Expect = 0.002
Identities = 41/202 (20%), Positives = 83/202 (41%), Gaps = 29/202 (14%)
Frame = +1
Query: 34 DRVVLKGPKECIEVAKARINEIIEDLEAKVTI-ECVIPQRHHRTVMGARGAKVKDIT-AE 207
D + L+GP E +E A+ + I +L + EC + Q++H ++G GA + +
Sbjct: 448 DSITLEGPPEQVESARESLEAFIRELIVSMAFAECNVDQKYHPHIIGKNGANGECLNWCT 507
Query: 208 FDVQIKFPERDTTEGADVPGRDIDENAEPGPNDIIKITGRPENCEGA----KKALLEQVP 375
+I+ + + R + ++ P D++ + G E+ + KK E V
Sbjct: 508 EKERIELGKTKKQRDVLINHRFFEPSSAPRKTDVVSLRGPREDVDKVHAYLKKLNAELVS 567
Query: 376 I--------------------TIDVEVPNELHRLLXGQ---KRRELMQTYDVHXLLPPNE 486
+ IDV + + H+ + G+ +++ + D LP
Sbjct: 568 VLASDKTQPLQASNEMVAANYCIDVPIFKQFHKNVIGRGGTTIKKIREETDTKIELPAEG 627
Query: 487 DTSDIVKVTGTPTSVENAKQAL 552
SD++ +TG VE A++ +
Sbjct: 628 SDSDVIIITGHKAQVEAAREKI 649
Score = 35.1 bits (77), Expect = 0.044
Identities = 41/174 (23%), Positives = 71/174 (40%), Gaps = 3/174 (1%)
Frame = +1
Query: 73 VAKARINEIIEDLEAKVTIECVIPQRHHRTVMGARGAKVKDITAEFDVQIKFPERDTTEG 252
VAKAR ++ L+ + IE IP+ HH+ ++G G ++ + +I P RD ++
Sbjct: 180 VAKAR-RLVLSQLQTQAQIEIQIPREHHKFILGKGGKTLQTMELSTATKITMP-RDGSDT 237
Query: 253 ADVPGRDIDENAEPGPNDIIKITGRPENCEGAKKALLEQVPITIDVEVPNELHRLLXG-- 426
+ G E + ++I I+ + K E++ I P H + G
Sbjct: 238 IKIIG--TKEGVDRARHEIQLIS------DQQAKLAFERLAI------PKTFHPFISGPN 283
Query: 427 -QKRRELMQTYDVHXLLPPNEDTSDIVKVTGTPTSVENAKQALTEKIAEMEKEK 585
+ + + +PP D + V G V AK + E I E +K K
Sbjct: 284 NETANRIKEQTGAAINIPPPSVNKDELTVAGEKDGVAQAKAMILE-IYEDKKRK 336
>SB_24937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 589
Score = 39.5 bits (88), Expect = 0.002
Identities = 22/120 (18%), Positives = 54/120 (45%)
Frame = +1
Query: 40 VVLKGPKECIEVAKARINEIIEDLEAKVTIECVIPQRHHRTVMGARGAKVKDITAEFDVQ 219
+ + G + + +AK ++ +++ ++VT++ + H ++G G +K + +
Sbjct: 315 IKVAGLPDSVRMAKEKVMAVLDTKSSRVTLKMDVSHTDHSHIIGKGGYNIKKVMQDTGCH 374
Query: 220 IKFPERDTTEGADVPGRDIDENAEPGPNDIIKITGRPENCEGAKKALLEQVPITIDVEVP 399
I FP D + + ++ + I G+P E A+ + E +P+ + E+P
Sbjct: 375 IHFP-------------DSNRGSSSEKSNQVSIAGQPLGVESARLHIREMLPLILTFELP 421
Score = 33.9 bits (74), Expect = 0.10
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = +1
Query: 121 VTIECVIPQRHHRTVMGARGAKVKDITAEFDVQIKFPERDTTE 249
V+++ I +HH ++G GA +K IT + + FP+ + T+
Sbjct: 470 VSMQIDIAPQHHLFIIGKNGANIKHITQQTGASVNFPDPNGTQ 512
>SB_27288| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 33.1 bits (72), Expect = 0.18
Identities = 31/113 (27%), Positives = 56/113 (49%), Gaps = 2/113 (1%)
Frame = +1
Query: 40 VVLKGPKECIEVAKARINEIIEDLEAKVTIECVIPQRHHRTVMGARGAKVKDITAEFDVQ 219
+V+KG +E A+ I +I+ + ++T E +IPQ ++G GA ++ + + V
Sbjct: 113 IVIKGEREKARKAELIIKKIVAEQPRQLTEEYLIPQAACGKIIGRGGATIRHL-CQVSVV 171
Query: 220 IKFPERDTTEGADVPGRDIDENAEPGPNDIIK--ITGRPENCEGAKKALLEQV 372
I F + T+GA R + + +E P+ K +TG + AK L E +
Sbjct: 172 I-FYRVNITQGA----RIVVDRSEIRPDVPRKCTVTGTVDQIANAKGLLDETI 219
>SB_3277| Best HMM Match : KH_1 (HMM E-Value=4.3e-30)
Length = 379
Score = 32.7 bits (71), Expect = 0.23
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 10/82 (12%)
Frame = +1
Query: 22 GVNSDRVV-LKGPKECIEVAKARINEIIED-LEAK--------VTIECVIPQRHHRTVMG 171
G +R+V + G K+ + A A I + +ED L++ VT+ ++P +++G
Sbjct: 46 GSTPERIVSVTGTKDAVVTAFALIGQKLEDELKSNSKSNTTPPVTLRLIVPGSQCGSIIG 105
Query: 172 ARGAKVKDITAEFDVQIKFPER 237
GAK+K+I + FP R
Sbjct: 106 KGGAKIKEIREVSGASVVFPPR 127
>SB_25863| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 813
Score = 31.5 bits (68), Expect = 0.54
Identities = 15/58 (25%), Positives = 31/58 (53%)
Frame = +1
Query: 25 VNSDRVVLKGPKECIEVAKARINEIIEDLEAKVTIECVIPQRHHRTVMGARGAKVKDI 198
+ D+ ++G +E AK IN+++ + + + IP+ R V+G G ++KD+
Sbjct: 431 IKEDKAYIRGTQEQKSKAKDLINKLLTSVSSGTCV--FIPEHLARHVIGKHGQRIKDL 486
>SB_30824| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 239
Score = 28.7 bits (61), Expect = 3.8
Identities = 21/72 (29%), Positives = 33/72 (45%)
Frame = -3
Query: 216 NIKFSSDVLDFGTTCTHDSSVMSLWNHTFNRYLRFQILNNFIDSCFSYFNTFFWSLKHDA 37
NI ++D +H SS LW + R ++L FID +++ WSLK D
Sbjct: 109 NILTDDCLMDSEEKTSHFSS--RLWLRGEIQVQR-KLLTEFIDVIVKRASSYAWSLKRDV 165
Query: 36 VAVDTLPRKRNL 1
+D L + N+
Sbjct: 166 ERLDELTERVNV 177
>SB_2738| Best HMM Match : KH_1 (HMM E-Value=0.087)
Length = 47
Score = 28.7 bits (61), Expect = 3.8
Identities = 9/35 (25%), Positives = 22/35 (62%)
Frame = +1
Query: 469 LLPPNEDTSDIVKVTGTPTSVENAKQALTEKIAEM 573
++P N + S+ +++ G+P VE AK + + + ++
Sbjct: 13 IIPSNTEKSNTIRIEGSPQGVEVAKNEIMQMVKKL 47
>SB_13208| Best HMM Match : ThiS (HMM E-Value=1.6)
Length = 1119
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +1
Query: 481 NEDTSDIVKVTGTPTSVENAKQALTEKIAEMEKEKEDR 594
NED S+I+ TS+ K+ L EK+ E ++EKED+
Sbjct: 350 NEDLSEIL------TSLSLEKKRLEEKVTENKEEKEDK 381
>SB_2557| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 627
Score = 28.7 bits (61), Expect = 3.8
Identities = 25/90 (27%), Positives = 37/90 (41%), Gaps = 10/90 (11%)
Frame = +1
Query: 97 IIEDLEAKVTIECVIPQRHHRTVMGARGAKVKDITA----------EFDVQIKFPERDTT 246
+ E+L+ KV+ EC + HH +V +TA ++D IKF E
Sbjct: 310 LFEELKDKVSTEC--KRSHHWQPKATDSLRVIQLTALEDWSVSDKQQWDSAIKFMENTLQ 367
Query: 247 EGADVPGRDIDENAEPGPNDIIKITGRPEN 336
E D I E PG + I I+ + N
Sbjct: 368 EKLDQASAQIHELTGPGAWERIAISAKQAN 397
>SB_26137| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.27)
Length = 271
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +1
Query: 475 PPNEDTSDIVKVTGTPTSVENAKQALTEKIAEMEKEKE 588
P N+ + + + GT + K+A TEK AE EKE E
Sbjct: 58 PGNQVSRNGREGMGTEKEAQTEKEAQTEKEAEREKEAE 95
>SB_9147| Best HMM Match : Sushi (HMM E-Value=0)
Length = 1656
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = -3
Query: 195 VLDFGTTCTHDSSVMSLWNHTFNRYLRFQILNNFIDSCFSY 73
+LD G T +S+ NHTFN Y+ + L+ +SY
Sbjct: 1305 LLDCGDPGTPRNSLKLNTNHTFNNYVFYHCLDGHAHRGYSY 1345
>SB_11346| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1706
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = -1
Query: 395 TSTSIVIGTCSSRAFLAP--SQFSGRPVILIMSLGPGSAFSSISLPGTSAPSVVSRS 231
T +++ T S++A +A SQ + L+M G + S+ P T P+++SR+
Sbjct: 751 TLKTVMSRTSSAKALIAEQSSQAAASSKKLVMQAGKAVSLSNTVKPATPRPNILSRT 807
>SB_45073| Best HMM Match : ERM (HMM E-Value=0)
Length = 504
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +1
Query: 484 EDTSDIVKVTGTPTSVENAKQALTEKIAEMEKEKED 591
++ + +VK T EN ++ L EK+ + E EKE+
Sbjct: 295 KERNALVKEAEARTKAENDRKLLEEKLKQSEAEKEE 330
>SB_36536| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1258
Score = 27.5 bits (58), Expect = 8.8
Identities = 21/70 (30%), Positives = 32/70 (45%)
Frame = +1
Query: 22 GVNSDRVVLKGPKECIEVAKARINEIIEDLEAKVTIECVIPQRHHRTVMGARGAKVKDIT 201
G DR+ L+ +E RI I+ED+EA+ +E R+ G+ G + D
Sbjct: 294 GEKKDRLPLELMMNFLEEDMERIKNILEDVEAEQEVERT-GDDLLRSARGSDGHET-DFL 351
Query: 202 AEFDVQIKFP 231
E D+ I P
Sbjct: 352 DEQDISINIP 361
>SB_235| Best HMM Match : Ribosomal_L7Ae (HMM E-Value=3.9e-15)
Length = 544
Score = 27.5 bits (58), Expect = 8.8
Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Frame = -3
Query: 210 KFSSDVLDFGTTC--THDSSVMSLWNHTFNRYLRFQILNNFIDS 85
K S + D TT T++ + LW + Y+ + L FID+
Sbjct: 493 KISEEQFDTSTTSRMTYEEYIAKLWTSSIRMYISKKTLERFIDN 536
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.313 0.134 0.374
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,492,668
Number of Sequences: 59808
Number of extensions: 320712
Number of successful extensions: 854
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 730
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 843
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1451595000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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