Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0464
         (465 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      27   0.11 
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      27   0.11 
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    23   1.1  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   1.1  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 26.6 bits (56), Expect = 0.11
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +2

Query: 47  LSSVPALAAPGPQAYPPGIEPAPIDMAL 130
           LSS PA+  PGP+   P +   P+++ +
Sbjct: 243 LSSHPAIVTPGPKQELPDLNHKPLNLTI 270


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 26.6 bits (56), Expect = 0.11
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +2

Query: 47  LSSVPALAAPGPQAYPPGIEPAPIDMAL 130
           LSS PA+  PGP+   P +   P+++ +
Sbjct: 135 LSSHPAIVTPGPKQELPDLNHKPLNLTI 162


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
 Frame = +2

Query: 41  TQLSSVPALAAPGPQAYPPG-IEPAPIDMALIVSQKLSMIRK 163
           T  SSVP  A+ G   Y PG     P D + +   + S++ K
Sbjct: 103 TSCSSVPTTASYGSDLYFPGATSQPPTDNSHVHHHQTSLLGK 144


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
 Frame = -2

Query: 176 FLLVPYESLTISVIQSMPCRWERALFLADKLV-VPGLLKRE 57
           FL+ P+ +   + I S  C+      +A KLV +  L K E
Sbjct: 418 FLITPFYNFNENTIHSKLCKLYATFLIALKLVWIVALFKNE 458


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,541
Number of Sequences: 336
Number of extensions: 2166
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10721526
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)