Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0463
         (428 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4S3R2 Cluster: Chromosome 17 SCAF14747, whole genome s...    33   1.9  
UniRef50_Q0C1P0 Cluster: Transporter, solute:sodium symporter (S...    31   7.7  
UniRef50_Q8SX83 Cluster: Protein split ends; n=10; Eukaryota|Rep...    31   7.7  
UniRef50_O15021 Cluster: Microtubule-associated serine/threonine...    31   7.7  

>UniRef50_Q4S3R2 Cluster: Chromosome 17 SCAF14747, whole genome
           shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 17
           SCAF14747, whole genome shotgun sequence - Tetraodon
           nigroviridis (Green puffer)
          Length = 492

 Score = 33.5 bits (73), Expect = 1.9
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = -3

Query: 405 RVPPRTSSAPVHPPQCTATRTKRSEKIQKCSQPSRDPAD 289
           +VPP+TS  P HP Q   +  +   + QK  QP +  AD
Sbjct: 349 QVPPQTSQQPHHPEQSVQSHQQLFPQTQKPEQPQQHTAD 387


>UniRef50_Q0C1P0 Cluster: Transporter, solute:sodium symporter (SSS)
           family; n=4; Proteobacteria|Rep: Transporter,
           solute:sodium symporter (SSS) family - Hyphomonas
           neptunium (strain ATCC 15444)
          Length = 483

 Score = 31.5 bits (68), Expect = 7.7
 Identities = 17/40 (42%), Positives = 22/40 (55%)
 Frame = +3

Query: 291 RRGLGWAANIFEFFPSVLFVSRYIGVGVRGRTRCAGAPEP 410
           R GLGW  +I+E  P +L V   IG  +  R   A +PEP
Sbjct: 435 RFGLGWHESIYEGLPGIL-VPLIIGWFLSERREIAASPEP 473


>UniRef50_Q8SX83 Cluster: Protein split ends; n=10; Eukaryota|Rep:
           Protein split ends - Drosophila melanogaster (Fruit fly)
          Length = 5560

 Score = 31.5 bits (68), Expect = 7.7
 Identities = 16/49 (32%), Positives = 24/49 (48%)
 Frame = -1

Query: 371 THPNVPRHEQNARKKFKNVRSPAETPPTLMNFHDFSSQSFRDYHTCSSS 225
           THP   RH  + R    + RS + +P +  + H  SS S    H+ +SS
Sbjct: 427 THPIRTRHNLHGRSTTSSSRSHSRSPSSYSSSHSSSSSSHSSSHSHASS 475


>UniRef50_O15021 Cluster: Microtubule-associated
            serine/threonine-protein kinase 4; n=70; Eukaryota|Rep:
            Microtubule-associated serine/threonine-protein kinase 4
            - Homo sapiens (Human)
          Length = 2444

 Score = 31.5 bits (68), Expect = 7.7
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = -2

Query: 403  GAPAHLVRPRTPTPMYRDT 347
            G+P H + PR+PTP YR T
Sbjct: 1120 GSPTHSLSPRSPTPSYRST 1138


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 416,116,335
Number of Sequences: 1657284
Number of extensions: 7546024
Number of successful extensions: 20609
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 19902
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20595
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 20653970351
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)