Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0463
         (428 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            24   2.6  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   6.1  
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          22   8.0  
AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal prot...    22   8.0  

>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.8 bits (49), Expect = 2.6
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = +1

Query: 7    ALSSYLLETSQFLHYKILINKPFSLNNK*KF*ISTSPV 120
            ALS  L E+   L +K+  N   SLNN  KF + T  +
Sbjct: 3259 ALSDELEESRHILQHKLYSNNSQSLNNF-KFGLHTQEI 3295


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 22.6 bits (46), Expect = 6.1
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = +1

Query: 7    ALSSYLLETSQFLHYKILINKPFSLNN 87
            ALS  L E+   L +K   N   SLNN
Sbjct: 3262 ALSEELEESRHILQHKFYSNNSQSLNN 3288


>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 22.2 bits (45), Expect = 8.0
 Identities = 13/39 (33%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
 Frame = -2

Query: 409 GSGAPAHLV-RPRTPTPMYRDTNKTLGKNSKMFAAQPRP 296
           G+G P  +  R +TP  +Y   N T       FA  P P
Sbjct: 458 GNGPPPPVPERSKTPNSIYLSQNGTPRSTPVPFALAPPP 496


>AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal protein
           rpL7a protein.
          Length = 271

 Score = 22.2 bits (45), Expect = 8.0
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +2

Query: 329 FSERFVRVAVHWGG 370
           F++RF  +  HWGG
Sbjct: 232 FNDRFDDIRRHWGG 245


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 431,754
Number of Sequences: 2352
Number of extensions: 6914
Number of successful extensions: 13
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 35292513
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)