Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0463
         (428 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92822-8|CAL49447.1| 1383|Caenorhabditis elegans Hypothetical pr...    28   2.5  
Z82094-4|CAL49445.1| 1383|Caenorhabditis elegans Hypothetical pr...    28   2.5  
DQ314286-1|ABC42046.1| 1383|Caenorhabditis elegans DYF-2 protein.      28   2.5  
AF016688-9|AAN65322.1|  816|Caenorhabditis elegans Hypothetical ...    28   3.3  
AF016688-8|AAB66079.2|  848|Caenorhabditis elegans Hypothetical ...    28   3.3  
Z98866-26|CAM33505.1|  559|Caenorhabditis elegans Hypothetical p...    27   4.3  
U10402-8|AAA19070.2| 1024|Caenorhabditis elegans Hypothetical pr...    26   10.0 

>Z92822-8|CAL49447.1| 1383|Caenorhabditis elegans Hypothetical
           protein ZK520.3a protein.
          Length = 1383

 Score = 28.3 bits (60), Expect = 2.5
 Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = -2

Query: 247 TIIHVRLANEARYRTTINRMRKNYYYASYR-GRKLRLY 137
           TI+     N   Y +T+  ++ NY YA+   G +LRL+
Sbjct: 456 TIVAAEPINRVEYLSTVTNIQLNYMYAAVNFGSRLRLH 493


>Z82094-4|CAL49445.1| 1383|Caenorhabditis elegans Hypothetical
           protein ZK520.3a protein.
          Length = 1383

 Score = 28.3 bits (60), Expect = 2.5
 Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = -2

Query: 247 TIIHVRLANEARYRTTINRMRKNYYYASYR-GRKLRLY 137
           TI+     N   Y +T+  ++ NY YA+   G +LRL+
Sbjct: 456 TIVAAEPINRVEYLSTVTNIQLNYMYAAVNFGSRLRLH 493


>DQ314286-1|ABC42046.1| 1383|Caenorhabditis elegans DYF-2 protein.
          Length = 1383

 Score = 28.3 bits (60), Expect = 2.5
 Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = -2

Query: 247 TIIHVRLANEARYRTTINRMRKNYYYASYR-GRKLRLY 137
           TI+     N   Y +T+  ++ NY YA+   G +LRL+
Sbjct: 456 TIVAAEPINRVEYLSTVTNIQLNYMYAAVNFGSRLRLH 493


>AF016688-9|AAN65322.1|  816|Caenorhabditis elegans Hypothetical
           protein F18A12.8b protein.
          Length = 816

 Score = 27.9 bits (59), Expect = 3.3
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = -3

Query: 405 RVPPRTSSAPVHPPQCTATRTKRSEKIQKCSQP 307
           RVPP    AP  P     T T++ ++ + CS P
Sbjct: 132 RVPPIVPEAPTSPEPEVTTSTEKPKEPEVCSTP 164


>AF016688-8|AAB66079.2|  848|Caenorhabditis elegans Hypothetical
           protein F18A12.8a protein.
          Length = 848

 Score = 27.9 bits (59), Expect = 3.3
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = -3

Query: 405 RVPPRTSSAPVHPPQCTATRTKRSEKIQKCSQP 307
           RVPP    AP  P     T T++ ++ + CS P
Sbjct: 132 RVPPIVPEAPTSPEPEVTTSTEKPKEPEVCSTP 164


>Z98866-26|CAM33505.1|  559|Caenorhabditis elegans Hypothetical
           protein Y49E10.29 protein.
          Length = 559

 Score = 27.5 bits (58), Expect = 4.3
 Identities = 11/40 (27%), Positives = 19/40 (47%)
 Frame = -3

Query: 411 RARVPPRTSSAPVHPPQCTATRTKRSEKIQKCSQPSRDPA 292
           +A  PP + SAPV  P     +    + I +   P ++P+
Sbjct: 435 QASAPPTSPSAPVQAPNTPTQKASSQDPIVQQDPPPKEPS 474


>U10402-8|AAA19070.2| 1024|Caenorhabditis elegans Hypothetical
           protein C34E10.8 protein.
          Length = 1024

 Score = 26.2 bits (55), Expect = 10.0
 Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = -1

Query: 371 THPNVPRHEQNARKKFKNVRSPA-ETPPTLMNFHDFSSQS 255
           T PN  +  Q ++KK  ++ S A  + P  MNF  + +QS
Sbjct: 470 TSPNSYQFHQQSQKKMPSIISTAYNSSPGKMNFQGWKNQS 509


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,690,425
Number of Sequences: 27780
Number of extensions: 185502
Number of successful extensions: 512
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 490
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 512
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 713998766
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)