Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0461
         (354 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L12397-1|AAL58637.1|  350|Homo sapiens Dopamine D4 receptor prot...    35   0.063
BC132927-1|AAI32928.1|  269|Homo sapiens hypothetical FLJ39653 p...    29   4.1  
AK096972-1|BAC04916.1|  269|Homo sapiens protein ( Homo sapiens ...    29   4.1  
BC119643-1|AAI19644.1|  370|Homo sapiens keratin associated prot...    28   9.5  
AJ566385-1|CAD97465.1|   53|Homo sapiens keratin associated prot...    28   9.5  
AB076354-1|BAD01541.1|  370|Homo sapiens keratin associated prot...    28   9.5  

>L12397-1|AAL58637.1|  350|Homo sapiens Dopamine D4 receptor
           protein.
          Length = 350

 Score = 35.1 bits (77), Expect = 0.063
 Identities = 18/32 (56%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
 Frame = -3

Query: 253 PHGIASRPSSQ-TFRARCVQPPRCPRGRAAPT 161
           P   A RPSS  T R RCV P  CPRG +AP+
Sbjct: 285 PSCCAGRPSSWCTSRRRCVLPAPCPRGWSAPS 316


>BC132927-1|AAI32928.1|  269|Homo sapiens hypothetical FLJ39653
           protein.
          Length = 269

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 22/77 (28%), Positives = 29/77 (37%), Gaps = 1/77 (1%)
 Frame = -3

Query: 247 GIASRPSSQTFRARCVQPPRCPRGRAAPTLDVQ*SWC-GSCGAYAAYD*RRRCK*PRSLG 71
           G A  P       RC Q  RCP  R+ P L  +   C G+     A   R R + P S  
Sbjct: 33  GSAVEPRRGGRHHRCPQSARCPAVRSGPLLQTRCPECAGAARQVLALLARPRRRGPGSRS 92

Query: 70  PTQEDPSSCLSMIRFYV 20
           PT         +  F++
Sbjct: 93  PTPTSAGPACPLFWFHL 109


>AK096972-1|BAC04916.1|  269|Homo sapiens protein ( Homo sapiens
           cDNA FLJ39653 fis, clone SMINT2005387. ).
          Length = 269

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 22/77 (28%), Positives = 29/77 (37%), Gaps = 1/77 (1%)
 Frame = -3

Query: 247 GIASRPSSQTFRARCVQPPRCPRGRAAPTLDVQ*SWC-GSCGAYAAYD*RRRCK*PRSLG 71
           G A  P       RC Q  RCP  R+ P L  +   C G+     A   R R + P S  
Sbjct: 33  GSAVEPRRGGRHHRCPQSARCPAVRSGPLLQTRCPECAGAARQVLALLARPRRRGPGSRS 92

Query: 70  PTQEDPSSCLSMIRFYV 20
           PT         +  F++
Sbjct: 93  PTPTSAGPACPLFWFHL 109


>BC119643-1|AAI19644.1|  370|Homo sapiens keratin associated protein
           10-7 protein.
          Length = 370

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 20/56 (35%), Positives = 21/56 (37%)
 Frame = -3

Query: 211 ARCVQPPRCPRGRAAPTLDVQ*SWCGSCGAYAAYD*RRRCK*PRSLGPTQEDPSSC 44
           A CV  P C     APT   Q S C      +    R  C  P   GPT    SSC
Sbjct: 320 ACCVPVPSC----CAPTSSCQASCCRPASCVSLLC-RPACSRPACCGPTSTQKSSC 370


>AJ566385-1|CAD97465.1|   53|Homo sapiens keratin associated protein
           KAP10.7 protein.
          Length = 53

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 20/56 (35%), Positives = 21/56 (37%)
 Frame = -3

Query: 211 ARCVQPPRCPRGRAAPTLDVQ*SWCGSCGAYAAYD*RRRCK*PRSLGPTQEDPSSC 44
           A CV  P C     APT   Q S C      +    R  C  P   GPT    SSC
Sbjct: 3   ACCVPVPSC----CAPTSSCQASCCRPASCVSLLC-RPACSRPACCGPTSTQKSSC 53


>AB076354-1|BAD01541.1|  370|Homo sapiens keratin associated protein
           protein.
          Length = 370

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 20/56 (35%), Positives = 21/56 (37%)
 Frame = -3

Query: 211 ARCVQPPRCPRGRAAPTLDVQ*SWCGSCGAYAAYD*RRRCK*PRSLGPTQEDPSSC 44
           A CV  P C     APT   Q S C      +    R  C  P   GPT    SSC
Sbjct: 320 ACCVPVPSC----CAPTSSCQASCCRPASCVSLLC-RPACSRPACCGPTSTQKSSC 370


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.311    0.126    0.369 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,529,070
Number of Sequences: 237096
Number of extensions: 744865
Number of successful extensions: 2608
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2552
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2608
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2075554296
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)