Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0460
         (333 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000E81F8A Cluster: PREDICTED: hypothetical protein;...    35   0.41 
UniRef50_Q1DYM6 Cluster: Predicted protein; n=1; Coccidioides im...    33   0.96 
UniRef50_UPI0000DC1E78 Cluster: UPI0000DC1E78 related cluster; n...    32   2.2  
UniRef50_Q0WYJ9 Cluster: Circumsporozoite protein/thrombospondin...    32   2.2  
UniRef50_Q8RIY7 Cluster: RloD; n=2; Campylobacter jejuni|Rep: Rl...    31   6.7  
UniRef50_Q64C16 Cluster: Phosphomannomutase; n=1; uncultured arc...    30   8.9  

>UniRef50_UPI0000E81F8A Cluster: PREDICTED: hypothetical protein;
           n=1; Gallus gallus|Rep: PREDICTED: hypothetical protein
           - Gallus gallus
          Length = 235

 Score = 34.7 bits (76), Expect = 0.41
 Identities = 17/76 (22%), Positives = 36/76 (47%)
 Frame = +2

Query: 2   FPITYIQCVNSGNRTSGSISPVGGECRGEEDVSMLMMMNIRKHYSVMSVYLKCGDYVMNL 181
           +P+  + C N+   TS  + P  G+   ++   ML  + ++     +    +CGD++   
Sbjct: 147 YPLRALSCRNNWKLTSFLVIPCSGKALTDKTTVMLDFLWLQISLMGLEKRRRCGDFIAAF 206

Query: 182 RVTSPVAEREEFRTIT 229
           + T   +++E  RT T
Sbjct: 207 QYTKGASKQEGSRTFT 222


>UniRef50_Q1DYM6 Cluster: Predicted protein; n=1; Coccidioides
           immitis|Rep: Predicted protein - Coccidioides immitis
          Length = 385

 Score = 33.5 bits (73), Expect = 0.96
 Identities = 12/39 (30%), Positives = 22/39 (56%)
 Frame = +2

Query: 53  SISPVGGECRGEEDVSMLMMMNIRKHYSVMSVYLKCGDY 169
           +I P+GG+   E+D S +   ++ +    M +  +CGDY
Sbjct: 56  NIQPLGGDSNNEDDCSFIFQNDVPEDNQSMEINSQCGDY 94


>UniRef50_UPI0000DC1E78 Cluster: UPI0000DC1E78 related cluster; n=1;
           Rattus norvegicus|Rep: UPI0000DC1E78 UniRef100 entry -
           Rattus norvegicus
          Length = 638

 Score = 32.3 bits (70), Expect = 2.2
 Identities = 15/55 (27%), Positives = 31/55 (56%)
 Frame = +2

Query: 44  TSGSISPVGGECRGEEDVSMLMMMNIRKHYSVMSVYLKCGDYVMNLRVTSPVAER 208
           T+  IS    EC      ++ M + +  + +++SV  KC ++V+ L  +SP++E+
Sbjct: 16  TASCISQNEXECLDSGQRALYMDVMLENYTNLISVVTKCCEHVIRLNFSSPLSEK 70


>UniRef50_Q0WYJ9 Cluster: Circumsporozoite
            protein/thrombospondin-related anonymous protein- related
            protein; n=1; Plasmodium gallinaceum|Rep:
            Circumsporozoite protein/thrombospondin-related anonymous
            protein- related protein - Plasmodium gallinaceum
          Length = 1875

 Score = 32.3 bits (70), Expect = 2.2
 Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
 Frame = -2

Query: 323  KRFTIPED--GGHCICASETPYIYAGV-TKTGNNRLSCEILP 207
            K  TIP+   G  C+C       + GV +K GNN+LS +I+P
Sbjct: 925  KPSTIPQTCVGDECLCKDYFDLTFIGVPSKQGNNKLSSDIIP 966


>UniRef50_Q8RIY7 Cluster: RloD; n=2; Campylobacter jejuni|Rep: RloD
           - Campylobacter jejuni
          Length = 1014

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 13/54 (24%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
 Frame = +2

Query: 137 VMSVYLKCGDYVMNLRVTSPV-AEREEFRTITCYYLSLLLPRKYKESRSHRCND 295
           + S+YL CG+Y  ++++T  + +++   +TI   +   +L + Y +++    ND
Sbjct: 485 ISSIYLNCGEYKKSVKITQDLWSDKNLDKTILSKHTLAILQKYYDDNKEILDND 538


>UniRef50_Q64C16 Cluster: Phosphomannomutase; n=1; uncultured
           archaeon GZfos26D6|Rep: Phosphomannomutase - uncultured
           archaeon GZfos26D6
          Length = 543

 Score = 30.3 bits (65), Expect = 8.9
 Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
 Frame = +2

Query: 35  GNRTSGSISPVGGECRGEEDVSMLMMMNIRKHYSVMSVY-LKCGDYVMNL 181
           G+R +G+ISP G    GE+ +++L    +++H+    VY  KC D +  +
Sbjct: 293 GDR-AGAISPTGKMIIGEQILALLCKHILKEHHHAKIVYDTKCSDAIREI 341


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 333,154,692
Number of Sequences: 1657284
Number of extensions: 5897360
Number of successful extensions: 12332
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12136
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12330
length of database: 575,637,011
effective HSP length: 86
effective length of database: 433,110,587
effective search space used: 10394654088
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)