Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0459
(484 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_50787| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.87
SB_52308| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.1
SB_18369| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.1
SB_45877| Best HMM Match : Borrelia_orfA (HMM E-Value=0.23) 29 2.0
SB_24878| Best HMM Match : JTB (HMM E-Value=1.6) 29 2.7
SB_4458| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_31340| Best HMM Match : DUF935 (HMM E-Value=0.19) 29 2.7
SB_10696| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_41945| Best HMM Match : Disintegrin (HMM E-Value=2.4) 28 3.5
SB_34715| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.5
SB_11112| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.6
SB_56504| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.6
SB_9510| Best HMM Match : Keratin_B2 (HMM E-Value=3.8e-05) 27 6.1
SB_395| Best HMM Match : Peptidase_A17 (HMM E-Value=5.9e-05) 27 6.1
SB_29475| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.1
SB_23731| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.1
SB_13237| Best HMM Match : zf-CCHC (HMM E-Value=0.0076) 27 6.1
SB_49531| Best HMM Match : C2 (HMM E-Value=2.9e-13) 27 8.1
SB_37954| Best HMM Match : Taeniidae_ag (HMM E-Value=1.5) 27 8.1
>SB_50787| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 599
Score = 30.3 bits (65), Expect = 0.87
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +1
Query: 91 SRGKKRRKKKEDVEGDSEESAAVRDSKLDSIIS 189
SRGKKR++K+ D E SE+S+A L +++
Sbjct: 120 SRGKKRKEKQIDAEEKSEKSSASSGEILKQVLT 152
>SB_52308| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1407
Score = 29.9 bits (64), Expect = 1.1
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +2
Query: 83 PRCPAVKKGVRKRKMSRE 136
PRCP VKK RKRK+ E
Sbjct: 923 PRCPCVKKNERKRKLPPE 940
>SB_18369| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 219
Score = 29.9 bits (64), Expect = 1.1
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +1
Query: 235 DRFYPPVKQCLRCLR*GHIAKFCKKAERC 321
D F K+C +C + GH A CK+ + C
Sbjct: 140 DSFPARGKKCAKCFKSGHFAACCKREKAC 168
>SB_45877| Best HMM Match : Borrelia_orfA (HMM E-Value=0.23)
Length = 734
Score = 29.1 bits (62), Expect = 2.0
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +1
Query: 58 HINWCVVVAAMSRGKKRRKKKEDVEGDSEESAAVRDSKLDSIISE*DAVKYLPFK 222
++ W + A++ GK+R ++ E A + DS+L+S E K +P K
Sbjct: 272 YVKWPALENALNAGKQRNSSAKNETKTHTEDAKLDDSELESSTPEDGRPKTVPVK 326
>SB_24878| Best HMM Match : JTB (HMM E-Value=1.6)
Length = 603
Score = 28.7 bits (61), Expect = 2.7
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +1
Query: 133 GDSEESAAVRDSKLDSIISE*DAVKYLPFKLSDYDRFYPPVKQ 261
GDS + +R S+ D++ DA+ +LP D PV Q
Sbjct: 505 GDSWNTHYIRKSRHDTVAGRPDAIFHLPESYGGIDNLLVPVSQ 547
>SB_4458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 339
Score = 28.7 bits (61), Expect = 2.7
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +1
Query: 133 GDSEESAAVRDSKLDSIISE*DAVKYLPFKLSDYDRFYPPVKQ 261
GDS + +R S+ D++ DA+ +LP D PV Q
Sbjct: 241 GDSWNTHYIRKSRHDTVAGRPDAIFHLPESYGGIDNLLVPVSQ 283
>SB_31340| Best HMM Match : DUF935 (HMM E-Value=0.19)
Length = 339
Score = 28.7 bits (61), Expect = 2.7
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +1
Query: 133 GDSEESAAVRDSKLDSIISE*DAVKYLPFKLSDYDRFYPPVKQ 261
GDS + +R S+ D++ DA+ +LP D PV Q
Sbjct: 241 GDSWNTHYIRKSRHDTVAGRPDAIFHLPESYGGIDNLLVPVSQ 283
>SB_10696| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 132
Score = 28.7 bits (61), Expect = 2.7
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +1
Query: 133 GDSEESAAVRDSKLDSIISE*DAVKYLPFKLSDYDRFYPPVKQ 261
GDS + +R S+ D++ DA+ +LP D PV Q
Sbjct: 34 GDSWNTHYIRKSRHDTVAGRPDAIFHLPESYGGIDNLLVPVSQ 76
>SB_41945| Best HMM Match : Disintegrin (HMM E-Value=2.4)
Length = 626
Score = 28.3 bits (60), Expect = 3.5
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +2
Query: 86 RCPAVKKGVRKRKMSRETPRKALRCGTRSWTPLSLNKT 199
RC + +R+ + R PR RCG WT +S ++
Sbjct: 16 RCITLCSSIREPEKGRNIPRSTYRCGV--WTDVSAKRS 51
>SB_34715| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 977
Score = 28.3 bits (60), Expect = 3.5
Identities = 22/61 (36%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = +1
Query: 91 SRGKKRRKKKEDVEGDSEESAAVRDSKLDSIIS-E*DAVKYLPFKLSDY-DRFYPPVKQC 264
S+ KK+ K K D EES + D + S + LPF S Y R +PP KQ
Sbjct: 336 SKEKKKWKSKTDDSRQGEESTSSHDEQTSEKPSPASNGGLALPFPTSFYGSRIWPPKKQH 395
Query: 265 L 267
L
Sbjct: 396 L 396
>SB_11112| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 464
Score = 27.9 bits (59), Expect = 4.6
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 4/38 (10%)
Frame = +1
Query: 70 CVVVAAMSRGK----KRRKKKEDVEGDSEESAAVRDSK 171
CV+VA K KR+ K +D+E DS+E++A +K
Sbjct: 99 CVIVAITYLSKLFDRKRKLKGKDIEADSKENSAESSTK 136
>SB_56504| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 292
Score = 27.9 bits (59), Expect = 4.6
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = -1
Query: 178 SPTSSPAPQRFPRSLPRHLPFSYAFFYRGTSRQQP 74
SP+SS +P P P H S A +GTS+ P
Sbjct: 105 SPSSSRSPSPRPTRKPEHSSLSPAKLGKGTSKLSP 139
>SB_9510| Best HMM Match : Keratin_B2 (HMM E-Value=3.8e-05)
Length = 500
Score = 27.5 bits (58), Expect = 6.1
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +1
Query: 262 CLRCLR*GHIAKFCKKAERC 321
C CLR GH + C+++++C
Sbjct: 75 CFGCLRGGHQRRSCRRSQKC 94
>SB_395| Best HMM Match : Peptidase_A17 (HMM E-Value=5.9e-05)
Length = 659
Score = 27.5 bits (58), Expect = 6.1
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +1
Query: 196 DAVKYLPFKLSDYDRFYPPVKQCLRCLR*GHIAKFCKKAERC 321
D+ K PFK + + + C CL+ GH A C + RC
Sbjct: 176 DSFKSKPFK--ERRKIVYNKRLCRNCLKEGHFADSCPSSGRC 215
>SB_29475| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 132
Score = 27.5 bits (58), Expect = 6.1
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = +1
Query: 133 GDSEESAAVRDSKLDSIISE*DAVKYLPFKLSDYDRFYPPVKQ 261
GDS + +R S D++ DA+ +LP D PV Q
Sbjct: 34 GDSWNTHYIRKSHHDTVAGRPDAIFHLPESYGGIDNLLVPVSQ 76
>SB_23731| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1133
Score = 27.5 bits (58), Expect = 6.1
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +1
Query: 196 DAVKYLPFKLSDYDRFYPPVKQCLRCLR*GHIAKFCKKAERC 321
D+ K PFK + + + C CL+ GH A C + RC
Sbjct: 169 DSFKSKPFK--ERRKIVYNKRLCRNCLKEGHFADSCPSSGRC 208
>SB_13237| Best HMM Match : zf-CCHC (HMM E-Value=0.0076)
Length = 558
Score = 27.5 bits (58), Expect = 6.1
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +1
Query: 256 KQCLRCLR*GHIAKFCKKAERC 321
K+C +C + GH A CK + C
Sbjct: 43 KKCAKCFKSGHFAACCKGEKAC 64
>SB_49531| Best HMM Match : C2 (HMM E-Value=2.9e-13)
Length = 752
Score = 27.1 bits (57), Expect = 8.1
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +1
Query: 118 KEDVEGDSEESAAVRDSKLDSIISE 192
KED + + E+S +RD K D++++E
Sbjct: 517 KEDDKEEEEKSEQIRDKKEDAVVNE 541
>SB_37954| Best HMM Match : Taeniidae_ag (HMM E-Value=1.5)
Length = 297
Score = 27.1 bits (57), Expect = 8.1
Identities = 14/56 (25%), Positives = 29/56 (51%)
Frame = +1
Query: 58 HINWCVVVAAMSRGKKRRKKKEDVEGDSEESAAVRDSKLDSIISE*DAVKYLPFKL 225
H++ ++ + + + + KK++ +GDSEE+ R + I + + YL KL
Sbjct: 102 HVSAKELIDEVVKQEMSKHKKKNNDGDSEETGTARSGEEKKIHHKLAEISYLEEKL 157
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,412,567
Number of Sequences: 59808
Number of extensions: 217028
Number of successful extensions: 905
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 824
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 894
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1013948003
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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