Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0459
         (484 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g44890.1 68415.m05588 cytochrome P450 family protein contains...    29   2.2  
At5g47910.1 68418.m05918 respiratory burst oxidase protein D (Rb...    27   5.0  
At1g21230.1 68414.m02653 wall-associated kinase, putative simila...    27   5.0  
At5g65900.1 68418.m08295 DEAD/DEAH box helicase, putative contai...    27   8.8  
At5g41020.1 68418.m04986 myb family transcription factor contain...    27   8.8  
At3g06720.2 68416.m00797 importin alpha-1 subunit, putative (IMP...    27   8.8  
At3g06720.1 68416.m00796 importin alpha-1 subunit, putative (IMP...    27   8.8  
At2g16485.1 68415.m01889 expressed protein ; expression supporte...    27   8.8  

>At2g44890.1 68415.m05588 cytochrome P450 family protein contains
           Pfam PF00067: Cytochrome P450; similar to  Cytochrome
           P450 86A2 (SP:O23066) [Arabidopsis thaliana]
          Length = 505

 Score = 28.7 bits (61), Expect = 2.2
 Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
 Frame = +1

Query: 124 DVEGDSEESAAVRDSKLDSIISE*DA-VKYLPFKLSDYDRFYPPVKQCLRC 273
           DV    E++  V +  ++S+  E  A ++YL   LS+  R YPPV + +RC
Sbjct: 331 DVTSSHEKTTDV-NGFIESVTEEALAQMQYLHAALSETMRLYPPVPEHMRC 380


>At5g47910.1 68418.m05918 respiratory burst oxidase protein D
           (RbohD) / NADPH oxidase identical to respiratory burst
           oxidase protein D from Arabidopsis thaliana [gi:3242789]
          Length = 921

 Score = 27.5 bits (58), Expect = 5.0
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +2

Query: 278 DKVTLPNFVKKLKGAPSLW 334
           +K+ LPNF+KKL G  + W
Sbjct: 540 NKLNLPNFLKKLTGFNAFW 558


>At1g21230.1 68414.m02653 wall-associated kinase, putative similar
           to wall-associated kinase 1 [Arabidopsis thaliana]
           GI:3549626; expressed in leaves and stems & induced by
           salicylic acid or INA (PMID:10380805)
          Length = 733

 Score = 27.5 bits (58), Expect = 5.0
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = -3

Query: 401 ERAACLTRVRDQVYPDSFEDKYPKEMEHL 315
           E AA L  +R +     + D+YPKE+EHL
Sbjct: 673 EVAAELEALRVKTTKHQWSDQYPKEVEHL 701


>At5g65900.1 68418.m08295 DEAD/DEAH box helicase, putative contains
           Pfam profiles  PF00270:DEAD/DEAH box helicase and
           PF00271:  Helicase conserved C-terminal domain;
           identical to cDNA RH27 helicase, partial GI:4033334
          Length = 633

 Score = 26.6 bits (56), Expect = 8.8
 Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
 Frame = +1

Query: 100 KKRRKKKEDVEGDSEESAAVRDSKLDSIISE*DAVKYLPFK-LSDYDRFYPPVKQ 261
           KK++K+++D E  SEE   V D + +  + E   +    F+ LS  D  Y  +K+
Sbjct: 118 KKKKKQRKDTEAKSEEE-EVEDKEEEKKLEETSIMTNKTFESLSLSDNTYKSIKE 171


>At5g41020.1 68418.m04986 myb family transcription factor contains
           Pfam profile: PF00249 Myb DNA binding domain
          Length = 588

 Score = 26.6 bits (56), Expect = 8.8
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +1

Query: 88  MSRGKKRRKKKEDVEGDSEES 150
           M+  KK +KKK D + DSEE+
Sbjct: 1   MAEEKKNKKKKSDAKVDSEET 21



 Score = 26.6 bits (56), Expect = 8.8
 Identities = 17/55 (30%), Positives = 27/55 (49%)
 Frame = +1

Query: 85  AMSRGKKRRKKKEDVEGDSEESAAVRDSKLDSIISE*DAVKYLPFKLSDYDRFYP 249
           A  R KK++KKK+    ++EE +   D  L +  +    VK+     SD   F+P
Sbjct: 236 AKKRRKKKKKKKQSEVSEAEEKSDKSDEDLTTPSTSSKRVKF-----SDQVEFFP 285


>At3g06720.2 68416.m00797 importin alpha-1 subunit, putative (IMPA1)
           similar to importin alpha-1 subunit (Karyopherin alpha-1
           subunit, KAP alpha) [Arabidopsis thaliana]
           SWISS-PROT:Q96321
          Length = 532

 Score = 26.6 bits (56), Expect = 8.8
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = +1

Query: 100 KKRRKKKEDVEGDSEESAAVRDSKLDSI 183
           KKRR+  + ++G    SAA  D KLDS+
Sbjct: 47  KKRREGMQALQGFPSASAASVDKKLDSL 74


>At3g06720.1 68416.m00796 importin alpha-1 subunit, putative (IMPA1)
           similar to importin alpha-1 subunit (Karyopherin alpha-1
           subunit, KAP alpha) [Arabidopsis thaliana]
           SWISS-PROT:Q96321
          Length = 532

 Score = 26.6 bits (56), Expect = 8.8
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = +1

Query: 100 KKRRKKKEDVEGDSEESAAVRDSKLDSI 183
           KKRR+  + ++G    SAA  D KLDS+
Sbjct: 47  KKRREGMQALQGFPSASAASVDKKLDSL 74


>At2g16485.1 68415.m01889 expressed protein ; expression supported
           by MPSS
          Length = 617

 Score = 26.6 bits (56), Expect = 8.8
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +1

Query: 127 VEGDSEESAAVRDSKLDSIISE*DAVKYLPFKLS 228
           V+G  EE+AA    ++DS+  +  AV+ +P K S
Sbjct: 84  VDGGGEENAAFNIQEIDSVGGDAAAVEEVPLKSS 117


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,659,061
Number of Sequences: 28952
Number of extensions: 155743
Number of successful extensions: 584
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 555
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 581
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 829097472
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)