Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0457
         (341 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    21   3.1  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    21   3.1  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    21   4.1  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   4.1  
U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor prot...    20   7.2  
L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein pro...    20   7.2  
AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin pr...    20   7.2  
AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    20   9.5  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    20   9.5  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    20   9.5  

>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.4 bits (43), Expect = 3.1
 Identities = 12/45 (26%), Positives = 17/45 (37%)
 Frame = +2

Query: 188 CSSRDRCDISGARRNRAXXXXXXXXXXXXXHRKHVRADRQRRCEQ 322
           C     C I   +RNR               R+ V+ +RQR  E+
Sbjct: 146 CREEKSCIIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRTKER 190


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.4 bits (43), Expect = 3.1
 Identities = 12/45 (26%), Positives = 17/45 (37%)
 Frame = +2

Query: 188 CSSRDRCDISGARRNRAXXXXXXXXXXXXXHRKHVRADRQRRCEQ 322
           C     C I   +RNR               R+ V+ +RQR  E+
Sbjct: 146 CREEKSCIIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRTKER 190


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 21.0 bits (42), Expect = 4.1
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +2

Query: 287 HVRADRQRRCEQ 322
           HVR+ R+  CEQ
Sbjct: 442 HVRSSRESSCEQ 453


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.0 bits (42), Expect = 4.1
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -3

Query: 288 CFLCSLFYIDDHSLMTE 238
           CF C+ + I DH  +T+
Sbjct: 609 CFNCTQYQIRDHKDVTQ 625


>U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor
           protein.
          Length = 95

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 14/52 (26%), Positives = 20/52 (38%)
 Frame = -3

Query: 273 LFYIDDHSLMTEARFLRAPEISHRSLDEHVESEKSNTPSNFVNCVWRSFKTQ 118
           +++I     M     + AP        EH E+E+       V C   SFK Q
Sbjct: 3   IYFIVGLLFMAMVAIMAAPVEDEFEPLEHFENEERADRHRRVTCDLLSFKGQ 54


>L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein
          protein.
          Length = 81

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 7/23 (30%), Positives = 11/23 (47%)
 Frame = -3

Query: 99 EKLYTKWSCERIESTLHSLSCLC 31
          EK+Y      ++    H+L C C
Sbjct: 23 EKVYVSLGALKMHIRTHTLPCKC 45


>AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin
           precursor protein.
          Length = 95

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 14/52 (26%), Positives = 20/52 (38%)
 Frame = -3

Query: 273 LFYIDDHSLMTEARFLRAPEISHRSLDEHVESEKSNTPSNFVNCVWRSFKTQ 118
           +++I     M     + AP        EH E+E+       V C   SFK Q
Sbjct: 3   IYFIVGLLFMAMVAIMAAPVEDEFEPLEHFENEERADRHRRVTCDLLSFKGQ 54


>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = +1

Query: 121 CFERSPYTIYKV*RCV*LFTFDMLVEGSMRYL 216
           C+ +  +TI     CV +FTF+++    ++YL
Sbjct: 489 CWWKICWTITTPAICVGVFTFNIIKFVPVKYL 520


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = +1

Query: 121 CFERSPYTIYKV*RCV*LFTFDMLVEGSMRYL 216
           C+ +  +TI     CV +FTF+++    ++YL
Sbjct: 542 CWWKICWTITTPAICVGVFTFNIIKFVPVKYL 573


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +3

Query: 168 LTFHFRHARRG 200
           LT H+R  RRG
Sbjct: 129 LTLHYRSKRRG 139


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,658
Number of Sequences: 438
Number of extensions: 1732
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7839909
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)