Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0456
         (425 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q23MB4 Cluster: Protein kinase domain containing protei...    32   4.3  
UniRef50_Q555E6 Cluster: Putative uncharacterized protein; n=4; ...    31   9.9  
UniRef50_A0CWP8 Cluster: Chromosome undetermined scaffold_3, who...    31   9.9  

>UniRef50_Q23MB4 Cluster: Protein kinase domain containing protein;
           n=1; Tetrahymena thermophila SB210|Rep: Protein kinase
           domain containing protein - Tetrahymena thermophila
           SB210
          Length = 870

 Score = 32.3 bits (70), Expect = 4.3
 Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
 Frame = -2

Query: 286 TFFQKYFXHFCKTSSALQGLKKTRLNILTLKLKSTVFC-ESLILIGYVSEYV*ILIF**R 110
           TFF+K+   F +   ++  L  T ++I  +     ++   + I++G  S Y  IL F   
Sbjct: 679 TFFEKFILLF-QVIQSIVPLGLTGISIYYITQSCFIYLLVAQIVVGVQSFYFSILSFKKE 737

Query: 109 HTRFFEFYIFPPNHTNVIHSFI 44
           + +FF+F+IF     N+I+S +
Sbjct: 738 YEKFFKFHIFFQILVNLIYSLL 759


>UniRef50_Q555E6 Cluster: Putative uncharacterized protein; n=4;
           Dictyostelium discoideum|Rep: Putative uncharacterized
           protein - Dictyostelium discoideum AX4
          Length = 349

 Score = 31.1 bits (67), Expect = 9.9
 Identities = 15/32 (46%), Positives = 20/32 (62%)
 Frame = +3

Query: 135 TYSETYPIKINDSQNTVLFNLSVKIFNRVFFN 230
           TYS  Y I I+ SQNTV+ N+S+ + N    N
Sbjct: 57  TYSNQYFIVIDPSQNTVVKNVSINVPNGYVIN 88


>UniRef50_A0CWP8 Cluster: Chromosome undetermined scaffold_3, whole
            genome shotgun sequence; n=2; Paramecium tetraurelia|Rep:
            Chromosome undetermined scaffold_3, whole genome shotgun
            sequence - Paramecium tetraurelia
          Length = 1262

 Score = 31.1 bits (67), Expect = 9.9
 Identities = 16/44 (36%), Positives = 23/44 (52%)
 Frame = -3

Query: 144  LSMYKF*FSSNDILDFSNFIFSRQITQMSFIRSFKFHSFATARH 13
            + + +F FSSND + +   IFS     MS I S K  + +  RH
Sbjct: 1106 MKLQRFSFSSNDTVTYDQSIFSSLFKYMSDIESLKQVNLSFQRH 1149


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 317,715,638
Number of Sequences: 1657284
Number of extensions: 4571425
Number of successful extensions: 9798
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9638
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9798
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 20232460752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)