Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0456
         (425 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_02_0682 - 12923103-12923747,12924607-12924870,12924953-129252...    27   4.8  

>02_02_0682 -
           12923103-12923747,12924607-12924870,12924953-12925219,
           12925301-12925529,12925614-12926295,12926409-12926682,
           12926822-12927347,12927460-12927698,12927799-12927896,
           12928017-12928020,12928657-12928832,12929593-12929647,
           12930787-12931047
          Length = 1239

 Score = 27.5 bits (58), Expect = 4.8
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = -3

Query: 120 SSNDILDFSNFIFSRQITQMSFIRSFKFHSFATARHRN 7
           ++N + D  NF+    I ++SF RS   HS      RN
Sbjct: 599 AANRLSDAGNFVSRHSIRKLSFERSMSRHSSLGGSRRN 636


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,947,533
Number of Sequences: 37544
Number of extensions: 103916
Number of successful extensions: 184
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 184
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 184
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 790518168
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)