Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0456
         (425 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70212-7|CAA94167.1|  332|Caenorhabditis elegans Hypothetical pr...    27   7.4  
Z66520-12|CAN86922.1|  220|Caenorhabditis elegans Hypothetical p...    27   7.4  
Z66520-11|CAA91383.1|  269|Caenorhabditis elegans Hypothetical p...    27   7.4  
Z74473-7|CAA98952.1| 3871|Caenorhabditis elegans Hypothetical pr...    26   9.8  
Z74046-5|CAA98557.1| 3871|Caenorhabditis elegans Hypothetical pr...    26   9.8  

>Z70212-7|CAA94167.1|  332|Caenorhabditis elegans Hypothetical
           protein R04D3.9 protein.
          Length = 332

 Score = 26.6 bits (56), Expect = 7.4
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = -1

Query: 122 FLVTTY*IFRILYFPAKSHKCHSFVHSNFIHS 27
           + VT Y    I++   K++K HS  HS F+ S
Sbjct: 298 YFVTPYRKKLIIWLRLKNNKMHSIAHSTFVVS 329


>Z66520-12|CAN86922.1|  220|Caenorhabditis elegans Hypothetical
           protein F49E12.9b protein.
          Length = 220

 Score = 26.6 bits (56), Expect = 7.4
 Identities = 15/47 (31%), Positives = 27/47 (57%)
 Frame = +3

Query: 123 IKIYTYSETYPIKINDSQNTVLFNLSVKIFNRVFFNPCSAELVLQKW 263
           +KIY Y +  P+ I     TV+ N++  +FN +FF   + +++  KW
Sbjct: 6   LKIYDYFDGDPLLIYVIGGTVIVNINFWLFN-LFF--ITIDMIDPKW 49


>Z66520-11|CAA91383.1|  269|Caenorhabditis elegans Hypothetical
           protein F49E12.9a protein.
          Length = 269

 Score = 26.6 bits (56), Expect = 7.4
 Identities = 15/47 (31%), Positives = 27/47 (57%)
 Frame = +3

Query: 123 IKIYTYSETYPIKINDSQNTVLFNLSVKIFNRVFFNPCSAELVLQKW 263
           +KIY Y +  P+ I     TV+ N++  +FN +FF   + +++  KW
Sbjct: 6   LKIYDYFDGDPLLIYVIGGTVIVNINFWLFN-LFF--ITIDMIDPKW 49


>Z74473-7|CAA98952.1| 3871|Caenorhabditis elegans Hypothetical
           protein ZC116.3 protein.
          Length = 3871

 Score = 26.2 bits (55), Expect = 9.8
 Identities = 11/14 (78%), Positives = 12/14 (85%)
 Frame = +3

Query: 372 LINKRYVCARYKPF 413
           L N+RYVCARY PF
Sbjct: 899 LFNRRYVCARY-PF 911


>Z74046-5|CAA98557.1| 3871|Caenorhabditis elegans Hypothetical
           protein ZC116.3 protein.
          Length = 3871

 Score = 26.2 bits (55), Expect = 9.8
 Identities = 11/14 (78%), Positives = 12/14 (85%)
 Frame = +3

Query: 372 LINKRYVCARYKPF 413
           L N+RYVCARY PF
Sbjct: 899 LFNRRYVCARY-PF 911


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,650,321
Number of Sequences: 27780
Number of extensions: 118949
Number of successful extensions: 327
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 323
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 327
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 703342068
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)