Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0450
         (731 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF011614-1|ABK41104.1|  446|Homo sapiens CDW4/GRWD1 protein.          145   2e-34
BC002440-1|AAH02440.1|  446|Homo sapiens glutamate-rich WD repea...   145   2e-34
AF337808-1|AAK17998.1|  446|Homo sapiens glutamate rich WD repea...   145   2e-34
AB075822-1|BAB85528.1|  445|Homo sapiens KIAA1942 protein protein.    145   2e-34
AK074676-1|BAC11130.1|  446|Homo sapiens protein ( Homo sapiens ...   143   5e-34
U50078-1|AAD12586.1| 4861|Homo sapiens p532 protein.                   30   7.4  

>EF011614-1|ABK41104.1|  446|Homo sapiens CDW4/GRWD1 protein.
          Length = 446

 Score =  145 bits (351), Expect = 2e-34
 Identities = 74/180 (41%), Positives = 107/180 (59%), Gaps = 4/180 (2%)
 Frame = +3

Query: 204 KTYLPDQ--PLKEDEQLVCDHSAYVMLHQAQTGAPCLSFDIVTDNLGNDRNEFPMTAYLV 377
           + YLP +  PL+E E+LV D  AYV+ H+AQTGAPCLSFDIV D+LG++R E P+T YL 
Sbjct: 31  QVYLPGRGPPLREGEELVMDEEAYVLYHRAQTGAPCLSFDIVRDHLGDNRTELPLTLYLC 90

Query: 378 AGTQASSAHLNNLLVIKMSNLHPISKPXXXXXXXXXXXXXXXXXQ--KPQMTFSFIKHQG 551
           AGTQA SA  N L++++M NLH    P                 +  KPQ+  + + H G
Sbjct: 91  AGTQAESAQSNRLMMLRMHNLHGTKPPPSEGSDEEEEEEDEEDEEERKPQLELAMVPHYG 150

Query: 552 CVNRIRATNFKNSVLAASWSELGRVDIWNITQQLQAVDDPVVLERYNLETVSNPVKPIYS 731
            +NR+R +      +A  WSE G+V+++ + + LQ V++P  L  + L      +KPI+S
Sbjct: 151 GINRVRVSWLGEEPVAGVWSEKGQVEVFALRRLLQVVEEPQALAAF-LRDEQAQMKPIFS 209


>BC002440-1|AAH02440.1|  446|Homo sapiens glutamate-rich WD repeat
           containing 1 protein.
          Length = 446

 Score =  145 bits (351), Expect = 2e-34
 Identities = 74/180 (41%), Positives = 107/180 (59%), Gaps = 4/180 (2%)
 Frame = +3

Query: 204 KTYLPDQ--PLKEDEQLVCDHSAYVMLHQAQTGAPCLSFDIVTDNLGNDRNEFPMTAYLV 377
           + YLP +  PL+E E+LV D  AYV+ H+AQTGAPCLSFDIV D+LG++R E P+T YL 
Sbjct: 31  QVYLPGRGPPLREGEELVMDEEAYVLYHRAQTGAPCLSFDIVRDHLGDNRTELPLTLYLC 90

Query: 378 AGTQASSAHLNNLLVIKMSNLHPISKPXXXXXXXXXXXXXXXXXQ--KPQMTFSFIKHQG 551
           AGTQA SA  N L++++M NLH    P                 +  KPQ+  + + H G
Sbjct: 91  AGTQAESAQSNRLMMLRMHNLHGTKPPPSEGSDEEEEEEDEEDEEERKPQLELAMVPHYG 150

Query: 552 CVNRIRATNFKNSVLAASWSELGRVDIWNITQQLQAVDDPVVLERYNLETVSNPVKPIYS 731
            +NR+R +      +A  WSE G+V+++ + + LQ V++P  L  + L      +KPI+S
Sbjct: 151 GINRVRVSWLGEEPVAGVWSEKGQVEVFALRRLLQVVEEPQALAAF-LRDEQAQMKPIFS 209


>AF337808-1|AAK17998.1|  446|Homo sapiens glutamate rich WD repeat
           protein protein.
          Length = 446

 Score =  145 bits (351), Expect = 2e-34
 Identities = 74/180 (41%), Positives = 107/180 (59%), Gaps = 4/180 (2%)
 Frame = +3

Query: 204 KTYLPDQ--PLKEDEQLVCDHSAYVMLHQAQTGAPCLSFDIVTDNLGNDRNEFPMTAYLV 377
           + YLP +  PL+E E+LV D  AYV+ H+AQTGAPCLSFDIV D+LG++R E P+T YL 
Sbjct: 31  QVYLPGRGPPLREGEELVMDEEAYVLYHRAQTGAPCLSFDIVRDHLGDNRTELPLTLYLC 90

Query: 378 AGTQASSAHLNNLLVIKMSNLHPISKPXXXXXXXXXXXXXXXXXQ--KPQMTFSFIKHQG 551
           AGTQA SA  N L++++M NLH    P                 +  KPQ+  + + H G
Sbjct: 91  AGTQAESAQSNRLMMLRMHNLHGTKPPPSEGSDEEEEEEDEEDEEERKPQLELAMVPHYG 150

Query: 552 CVNRIRATNFKNSVLAASWSELGRVDIWNITQQLQAVDDPVVLERYNLETVSNPVKPIYS 731
            +NR+R +      +A  WSE G+V+++ + + LQ V++P  L  + L      +KPI+S
Sbjct: 151 GINRVRVSWLGEEPVAGVWSEKGQVEVFALRRLLQVVEEPQALAAF-LRDEQAQMKPIFS 209


>AB075822-1|BAB85528.1|  445|Homo sapiens KIAA1942 protein protein.
          Length = 445

 Score =  145 bits (351), Expect = 2e-34
 Identities = 74/180 (41%), Positives = 107/180 (59%), Gaps = 4/180 (2%)
 Frame = +3

Query: 204 KTYLPDQ--PLKEDEQLVCDHSAYVMLHQAQTGAPCLSFDIVTDNLGNDRNEFPMTAYLV 377
           + YLP +  PL+E E+LV D  AYV+ H+AQTGAPCLSFDIV D+LG++R E P+T YL 
Sbjct: 30  QVYLPGRGPPLREGEELVMDEEAYVLYHRAQTGAPCLSFDIVRDHLGDNRTELPLTLYLC 89

Query: 378 AGTQASSAHLNNLLVIKMSNLHPISKPXXXXXXXXXXXXXXXXXQ--KPQMTFSFIKHQG 551
           AGTQA SA  N L++++M NLH    P                 +  KPQ+  + + H G
Sbjct: 90  AGTQAESAQSNRLMMLRMHNLHGTKPPPSEGSDEEEEEEDEEDEEERKPQLELAMVPHYG 149

Query: 552 CVNRIRATNFKNSVLAASWSELGRVDIWNITQQLQAVDDPVVLERYNLETVSNPVKPIYS 731
            +NR+R +      +A  WSE G+V+++ + + LQ V++P  L  + L      +KPI+S
Sbjct: 150 GINRVRVSWLGEEPVAGVWSEKGQVEVFALRRLLQVVEEPQALAAF-LRDEQAQMKPIFS 208


>AK074676-1|BAC11130.1|  446|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90195 fis, clone MAMMA1001310. ).
          Length = 446

 Score =  143 bits (347), Expect = 5e-34
 Identities = 74/180 (41%), Positives = 106/180 (58%), Gaps = 4/180 (2%)
 Frame = +3

Query: 204 KTYLPDQ--PLKEDEQLVCDHSAYVMLHQAQTGAPCLSFDIVTDNLGNDRNEFPMTAYLV 377
           + YLP +  PL+E E+LV D  AYV+ H+AQTGAPCLSFDIV D+LG++R E P+T YL 
Sbjct: 31  QVYLPGRGPPLREGEELVMDEEAYVLYHRAQTGAPCLSFDIVRDHLGDNRTELPLTLYLC 90

Query: 378 AGTQASSAHLNNLLVIKMSNLHPISKPXXXXXXXXXXXXXXXXXQ--KPQMTFSFIKHQG 551
           AGTQA SA  N L+++ M NLH    P                 +  KPQ+  + + H G
Sbjct: 91  AGTQAESAQSNRLMMLLMHNLHGTKPPPSEGSDEEEEEEDEEDEEERKPQLELAMVPHYG 150

Query: 552 CVNRIRATNFKNSVLAASWSELGRVDIWNITQQLQAVDDPVVLERYNLETVSNPVKPIYS 731
            +NR+R +      +A  WSE G+V+++ + + LQ V++P  L  + L      +KPI+S
Sbjct: 151 GINRVRVSWLGEEPVAGVWSEKGQVEVFALRRLLQVVEEPQALAAF-LRDEQAQMKPIFS 209


>U50078-1|AAD12586.1| 4861|Homo sapiens p532 protein.
          Length = 4861

 Score = 30.3 bits (65), Expect = 7.4
 Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
 Frame = +3

Query: 531  SFIKHQGCVNRIRATNF--KNSVLAASWSELGRVDIWNITQQLQAVDDPVVLERYN---L 695
            SFIK +   NR+    +  K  +LA S ++ G + +WN+T++  ++    V  R      
Sbjct: 3420 SFIKLEAHQNRVMTCVWCNKKGLLATSGND-GTIRVWNVTKKQYSLQQTCVFNRLEGDAE 3478

Query: 696  ETVSNPVKPIYS 731
            E++ +P  P +S
Sbjct: 3479 ESLGSPSDPSFS 3490


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,105,435
Number of Sequences: 237096
Number of extensions: 1646849
Number of successful extensions: 2750
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2670
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2745
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8679165170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)