Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0450
         (731 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY128462-1|AAM75055.1|  456|Drosophila melanogaster RE17371p pro...   198   6e-51
AY071477-1|AAL49099.1|  456|Drosophila melanogaster RE55020p pro...   198   6e-51
AE013599-104|AAF57313.3|  456|Drosophila melanogaster CG12792-PA...   198   6e-51

>AY128462-1|AAM75055.1|  456|Drosophila melanogaster RE17371p
           protein.
          Length = 456

 Score =  198 bits (483), Expect = 6e-51
 Identities = 96/175 (54%), Positives = 121/175 (69%), Gaps = 4/175 (2%)
 Frame = +3

Query: 204 KTYLPDQPLKEDEQLVCDHSAYVMLHQAQTGAPCLSFDIVTDNLGNDRNEFPMTAYLVAG 383
           + YLP   L +DE+LVCD SAYVMLHQA TGAPCLSFD++ D LG+ R  FPMTAY+VAG
Sbjct: 42  EVYLPGTKLADDEELVCDESAYVMLHQASTGAPCLSFDVIPDELGSGRQSFPMTAYIVAG 101

Query: 384 TQASSAHLNNLLVIKMSNLHPI----SKPXXXXXXXXXXXXXXXXXQKPQMTFSFIKHQG 551
           TQAS AH+NNL+V+KMSNLH                          +KPQMT + +KHQG
Sbjct: 102 TQASRAHVNNLIVMKMSNLHKTQDNDGDEDEELEDDQDDVTDREELKKPQMTCALVKHQG 161

Query: 552 CVNRIRATNFKNSVLAASWSELGRVDIWNITQQLQAVDDPVVLERYNLETVSNPV 716
           CVNR+RA    NSV AASWSELGRV+IW++TQ LQAV++  + ++Y  ++ + PV
Sbjct: 162 CVNRVRARRLGNSVYAASWSELGRVNIWDLTQPLQAVENAQLAKQYE-QSEARPV 215


>AY071477-1|AAL49099.1|  456|Drosophila melanogaster RE55020p
           protein.
          Length = 456

 Score =  198 bits (483), Expect = 6e-51
 Identities = 96/175 (54%), Positives = 121/175 (69%), Gaps = 4/175 (2%)
 Frame = +3

Query: 204 KTYLPDQPLKEDEQLVCDHSAYVMLHQAQTGAPCLSFDIVTDNLGNDRNEFPMTAYLVAG 383
           + YLP   L +DE+LVCD SAYVMLHQA TGAPCLSFD++ D LG+ R  FPMTAY+VAG
Sbjct: 42  EVYLPGTKLADDEELVCDESAYVMLHQASTGAPCLSFDVIPDELGSGRQSFPMTAYIVAG 101

Query: 384 TQASSAHLNNLLVIKMSNLHPI----SKPXXXXXXXXXXXXXXXXXQKPQMTFSFIKHQG 551
           TQAS AH+NNL+V+KMSNLH                          +KPQMT + +KHQG
Sbjct: 102 TQASRAHVNNLIVMKMSNLHKTQDNDGDEDEELEDDQDDVTDREELKKPQMTCALVKHQG 161

Query: 552 CVNRIRATNFKNSVLAASWSELGRVDIWNITQQLQAVDDPVVLERYNLETVSNPV 716
           CVNR+RA    NSV AASWSELGRV+IW++TQ LQAV++  + ++Y  ++ + PV
Sbjct: 162 CVNRVRARRLGNSVYAASWSELGRVNIWDLTQPLQAVENAQLAKQYE-QSEARPV 215


>AE013599-104|AAF57313.3|  456|Drosophila melanogaster CG12792-PA
           protein.
          Length = 456

 Score =  198 bits (483), Expect = 6e-51
 Identities = 96/175 (54%), Positives = 121/175 (69%), Gaps = 4/175 (2%)
 Frame = +3

Query: 204 KTYLPDQPLKEDEQLVCDHSAYVMLHQAQTGAPCLSFDIVTDNLGNDRNEFPMTAYLVAG 383
           + YLP   L +DE+LVCD SAYVMLHQA TGAPCLSFD++ D LG+ R  FPMTAY+VAG
Sbjct: 42  EVYLPGTKLADDEELVCDESAYVMLHQASTGAPCLSFDVIPDELGSGRQSFPMTAYIVAG 101

Query: 384 TQASSAHLNNLLVIKMSNLHPI----SKPXXXXXXXXXXXXXXXXXQKPQMTFSFIKHQG 551
           TQAS AH+NNL+V+KMSNLH                          +KPQMT + +KHQG
Sbjct: 102 TQASRAHVNNLIVMKMSNLHKTQDNDGDEDEELEDDQDDVTDREELKKPQMTCALVKHQG 161

Query: 552 CVNRIRATNFKNSVLAASWSELGRVDIWNITQQLQAVDDPVVLERYNLETVSNPV 716
           CVNR+RA    NSV AASWSELGRV+IW++TQ LQAV++  + ++Y  ++ + PV
Sbjct: 162 CVNRVRARRLGNSVYAASWSELGRVNIWDLTQPLQAVENAQLAKQYE-QSEARPV 215


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,407,462
Number of Sequences: 53049
Number of extensions: 527299
Number of successful extensions: 1233
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1210
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1230
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3293648160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)