Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0449
         (548 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00015ADE50 Cluster: hypothetical protein NEMVEDRAFT_...    36   0.62 
UniRef50_UPI0000D56527 Cluster: PREDICTED: similar to Cysteine a...    34   2.5  
UniRef50_Q14990 Cluster: Outer dense fiber protein 1; n=21; Mamm...    34   2.5  
UniRef50_UPI0000D9D22B Cluster: PREDICTED: hypothetical protein;...    33   4.4  
UniRef50_A7T6H4 Cluster: Predicted protein; n=3; Eukaryota|Rep: ...    33   4.4  
UniRef50_A6F672 Cluster: Putative uncharacterized protein; n=1; ...    33   5.8  
UniRef50_Q7RRI0 Cluster: CCAAT-box DNA binding protein subunit B...    33   5.8  
UniRef50_Q5DAV3 Cluster: Putative uncharacterized protein; n=1; ...    33   5.8  
UniRef50_Q380W9 Cluster: Putative uncharacterized protein; n=1; ...    33   5.8  
UniRef50_A5DYD8 Cluster: Putative uncharacterized protein; n=1; ...    33   5.8  
UniRef50_A4VDR7 Cluster: Putative uncharacterized protein; n=1; ...    32   7.6  
UniRef50_Q6ZUE5 Cluster: CDNA FLJ43779 fis, clone TESTI2051488; ...    32   7.6  

>UniRef50_UPI00015ADE50 Cluster: hypothetical protein
           NEMVEDRAFT_v1g69851; n=1; Nematostella vectensis|Rep:
           hypothetical protein NEMVEDRAFT_v1g69851 - Nematostella
           vectensis
          Length = 138

 Score = 35.9 bits (79), Expect = 0.62
 Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 10/78 (12%)
 Frame = -3

Query: 492 CKIHLLCHDWCCNSFHRYYNEYHYCMMNSLRH---HHGLH-GFH-NC-----LDCYCLYK 343
           C+ H  CH  C ++ H  Y+   +C  +S  H   H   H  +H NC      DC+C Y 
Sbjct: 2   CRCHSNCHCRCHSNCHCRYHSNCHCRYHSNCHCRCHSNCHCRYHSNCHCRYHSDCHCRYH 61

Query: 342 NLCIRYLYHHCSSLVHNN 289
           + C    +  C    H+N
Sbjct: 62  SNCHCRYHSDCHCRCHSN 79



 Score = 35.1 bits (77), Expect = 1.1
 Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
 Frame = -3

Query: 492 CKIHLLCHDWCCNSFHRYYNEYHYCMMNSLRHHHGLH-GFHNCLDCYCLYKNLCIRYLYH 316
           C+ H  CH  C ++ H  Y+   +C     R+H   H  +H+  +C+C Y + C    + 
Sbjct: 26  CRYHSNCHCRCHSNCHCRYHSNCHC-----RYHSDCHCRYHS--NCHCRYHSDCHCRCHS 78

Query: 315 HCSSLVHNN 289
           +C    H+N
Sbjct: 79  NCHCRYHSN 87


>UniRef50_UPI0000D56527 Cluster: PREDICTED: similar to Cysteine and
           glycine-rich protein 2 (Cysteine-rich protein 2) (CRP2)
           (Smooth muscle cell LIM protein) (SmLIM); n=1; Tribolium
           castaneum|Rep: PREDICTED: similar to Cysteine and
           glycine-rich protein 2 (Cysteine-rich protein 2) (CRP2)
           (Smooth muscle cell LIM protein) (SmLIM) - Tribolium
           castaneum
          Length = 235

 Score = 33.9 bits (74), Expect = 2.5
 Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
 Frame = -3

Query: 384 HG-FH-NCLDCYCLYKNLCIRYLYHHCSSL 301
           HG +H  C  CYC  K+LC++ +Y  C  +
Sbjct: 184 HGSYHLGCFSCYCCCKSLCVKTMYEACGEI 213


>UniRef50_Q14990 Cluster: Outer dense fiber protein 1; n=21;
           Mammalia|Rep: Outer dense fiber protein 1 - Homo sapiens
           (Human)
          Length = 250

 Score = 33.9 bits (74), Expect = 2.5
 Identities = 20/56 (35%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
 Frame = -3

Query: 492 CKIHLLCHDWCCNSFHRYYNEYHYCMMNSLRHHH-GLHGFHNCLDCYCLYKNLCIR 328
           C   L  H +CC   H     Y YC+  S R    GL   + C  C C YK  C+R
Sbjct: 35  CLCDLYMHPYCCCDLH----PYPYCLCYSKRSRSCGLCDLYPC--CLCDYKLYCLR 84


>UniRef50_UPI0000D9D22B Cluster: PREDICTED: hypothetical protein;
           n=1; Macaca mulatta|Rep: PREDICTED: hypothetical protein
           - Macaca mulatta
          Length = 229

 Score = 33.1 bits (72), Expect = 4.4
 Identities = 12/41 (29%), Positives = 20/41 (48%)
 Frame = -3

Query: 474 CHDWCCNSFHRYYNEYHYCMMNSLRHHHGLHGFHNCLDCYC 352
           CH    +  H ++  +H+   +  R HH  H FHN  + +C
Sbjct: 188 CHSHHHSHHHSHHRSHHHSHHSHHRSHHSHHNFHNHSNPWC 228


>UniRef50_A7T6H4 Cluster: Predicted protein; n=3; Eukaryota|Rep:
           Predicted protein - Nematostella vectensis
          Length = 82

 Score = 33.1 bits (72), Expect = 4.4
 Identities = 18/62 (29%), Positives = 28/62 (45%)
 Frame = -3

Query: 471 HDWCCNSFHRYYNEYHYCMMNSLRHHHGLHGFHNCLDCYCLYKNLCIRYLYHHCSSLVHN 292
           H  C ++ H +   YHY   N+  HHH  H  H+    +  + N    + YHH     H+
Sbjct: 12  HSHCHHNLH-HQKHYHYHHHNNHYHHH--HHHHSFCHHHHHHHNHHHHHHYHHSHRHHHH 68

Query: 291 NH 286
           +H
Sbjct: 69  HH 70


>UniRef50_A6F672 Cluster: Putative uncharacterized protein; n=1;
           Moritella sp. PE36|Rep: Putative uncharacterized protein
           - Moritella sp. PE36
          Length = 422

 Score = 32.7 bits (71), Expect = 5.8
 Identities = 17/38 (44%), Positives = 22/38 (57%)
 Frame = +3

Query: 426 DTRYNSGGRSYNTSRDRVDESYKKTYRNESSVNYSNRA 539
           D +Y+S    Y+  RD+   +Y K YR E S N SNRA
Sbjct: 109 DKKYDS---EYDDVRDKFGFAYSKGYRTEPSFNVSNRA 143


>UniRef50_Q7RRI0 Cluster: CCAAT-box DNA binding protein subunit B;
           n=5; Plasmodium (Vinckeia)|Rep: CCAAT-box DNA binding
           protein subunit B - Plasmodium yoelii yoelii
          Length = 834

 Score = 32.7 bits (71), Expect = 5.8
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = -2

Query: 163 YSKITKYYFKLTIMKTRLRLKLISVTNFNNYFAMIMIF 50
           Y+KI+KY FKL + K    +K   +T+FNN    +  F
Sbjct: 307 YNKISKYNFKLLLQKNIPFIKYNDITHFNNIIYNVNTF 344


>UniRef50_Q5DAV3 Cluster: Putative uncharacterized protein; n=1;
           Schistosoma japonicum|Rep: Putative uncharacterized
           protein - Schistosoma japonicum (Blood fluke)
          Length = 230

 Score = 32.7 bits (71), Expect = 5.8
 Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
 Frame = -3

Query: 420 CMMNSLRHHHGLHGFHNCLDCYC--LYKNLCIRYLYHHC-SSLVHNNH 286
           C+   L HHH  H   +   C+C   Y +LC R  +HHC   L +++H
Sbjct: 16  CLRYHLCHHHSYHHLLSRYPCHCHHPYHHLCRR--HHHCHPCLPYHDH 61


>UniRef50_Q380W9 Cluster: Putative uncharacterized protein; n=1;
           Trypanosoma brucei|Rep: Putative uncharacterized protein
           - Trypanosoma brucei
          Length = 232

 Score = 32.7 bits (71), Expect = 5.8
 Identities = 23/96 (23%), Positives = 42/96 (43%), Gaps = 13/96 (13%)
 Frame = -3

Query: 510 HFDMFFCKIHLLCHDWCCNSFHRYYNEYHYCMMNSLRHHHGLHGFHNCLDCYCLYKNLCI 331
           ++++  C I  L +++  + ++ YY  Y+   + +       H ++  + CYC Y N+ I
Sbjct: 70  YYNIRICTITTLSYNYYYHYYYYYYCSYYNIRIYTPTTLFYYHYYYYYVHCYCSYYNIRI 129

Query: 330 --------RYLYHH-----CSSLVHNNHDLGTTSNF 262
                    Y YHH     CS      H L T S++
Sbjct: 130 YTLTTLSYHYYYHHHYYYYCSYYNIRIHTLTTLSHY 165


>UniRef50_A5DYD8 Cluster: Putative uncharacterized protein; n=1;
           Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
           uncharacterized protein - Lodderomyces elongisporus
           (Yeast) (Saccharomyces elongisporus)
          Length = 156

 Score = 32.7 bits (71), Expect = 5.8
 Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
 Frame = -3

Query: 471 HDWCCNSFHRYYNEYHYCMMNSLRHHHGLHGFHNCLDCYCLYKNLCIR-YLYHHCSSLVH 295
           H +CC  ++ YY  Y YC  + L      H + +  D +  ++ L +R Y YHH    +H
Sbjct: 93  HCYCCGYYYYYYYYYCYC-FDWLFLQQVPHVYFHSSD-FANHQYLSLRHYHYHHHHHQLH 150

Query: 294 NNH 286
           + H
Sbjct: 151 HYH 153


>UniRef50_A4VDR7 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 233

 Score = 32.3 bits (70), Expect = 7.6
 Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 9/75 (12%)
 Frame = -3

Query: 510 HFDMFFCKIHLLCHDWCCNSFHR---------YYNEYHYCMMNSLRHHHGLHGFHNCLDC 358
           HFD +FC  H   H    +  H+         +Y  + Y + N L HH+ L  +H  L  
Sbjct: 81  HFDYYFCLKHQNHHTQIPHRHHQNLSFRFSFYFYRFFFYYLQNHLLHHNHLLQYHLIL-- 138

Query: 357 YCLYKNLCIRYLYHH 313
             L + + + Y  HH
Sbjct: 139 -LLLQRINLHYRTHH 152


>UniRef50_Q6ZUE5 Cluster: CDNA FLJ43779 fis, clone TESTI2051488;
           n=14; Catarrhini|Rep: CDNA FLJ43779 fis, clone
           TESTI2051488 - Homo sapiens (Human)
          Length = 168

 Score = 32.3 bits (70), Expect = 7.6
 Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 5/37 (13%)
 Frame = -3

Query: 465 WC-CNSFH----RYYNEYHYCMMNSLRHHHGLHGFHN 370
           WC C+S H    R ++  H+C  +   HH G H  HN
Sbjct: 122 WCSCHSHHHSHHRSHHRSHHCSHHHSHHHSGHHSHHN 158


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 367,862,831
Number of Sequences: 1657284
Number of extensions: 6491426
Number of successful extensions: 20606
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 18246
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20362
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 35822246242
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)