Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0449
         (548 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex det...    27   0.13 
AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex det...    23   1.5  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    22   4.7  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    22   4.7  
DQ325067-1|ABD14081.1|  152|Apis mellifera complementary sex det...    22   4.7  
DQ325066-1|ABD14080.1|  152|Apis mellifera complementary sex det...    22   4.7  
DQ325065-1|ABD14079.1|  152|Apis mellifera complementary sex det...    22   4.7  
DQ325064-1|ABD14078.1|  152|Apis mellifera complementary sex det...    22   4.7  
DQ325063-1|ABD14077.1|  152|Apis mellifera complementary sex det...    22   4.7  
DQ325062-1|ABD14076.1|  152|Apis mellifera complementary sex det...    22   4.7  
DQ325061-1|ABD14075.1|  152|Apis mellifera complementary sex det...    22   4.7  
AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          22   4.7  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          22   4.7  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          22   4.7  
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          22   4.7  
AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.          22   4.7  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          22   4.7  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          22   4.7  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    22   4.7  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    22   4.7  

>AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex
           determiner protein.
          Length = 425

 Score = 27.1 bits (57), Expect = 0.13
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = +3

Query: 420 NNDTRYNSGGRSYNTSRDRVDESYKKTYRNESSVNY 527
           +N   YN+   +YN   +  + +YKK Y N   +NY
Sbjct: 325 SNYNNYNNNYNNYNNYNNNYNNNYKKLYYN---INY 357


>AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex
           determiner protein.
          Length = 426

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +3

Query: 420 NNDTRYNSGGRSYNTSRDRVDESYKKTYRN 509
           NN+   N+   +YN   +    +YKK Y N
Sbjct: 326 NNNYNNNNYNNNYNNYNNNNYNNYKKLYYN 355


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = -3

Query: 507 FDMFFCKIHLLCHDWCCNS 451
           F +  CK+ L C   CC +
Sbjct: 104 FGIHLCKLWLTCDVLCCTA 122


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = -3

Query: 507 FDMFFCKIHLLCHDWCCNS 451
           F +  CK+ L C   CC +
Sbjct: 104 FGIHLCKLWLTCDVLCCTA 122


>DQ325067-1|ABD14081.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +3

Query: 432 RYNSGGRSYNTSRDRVDESYK 494
           R  +  R Y+ SR+R  +SYK
Sbjct: 31  RERTSRRRYSRSREREQKSYK 51


>DQ325066-1|ABD14080.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +3

Query: 432 RYNSGGRSYNTSRDRVDESYK 494
           R  +  R Y+ SR+R  +SYK
Sbjct: 31  RERTSRRRYSRSREREQKSYK 51


>DQ325065-1|ABD14079.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +3

Query: 432 RYNSGGRSYNTSRDRVDESYK 494
           R  +  R Y+ SR+R  +SYK
Sbjct: 31  RERTSRRRYSRSREREQKSYK 51


>DQ325064-1|ABD14078.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +3

Query: 432 RYNSGGRSYNTSRDRVDESYK 494
           R  +  R Y+ SR+R  +SYK
Sbjct: 31  RERTSRRRYSRSREREQKSYK 51


>DQ325063-1|ABD14077.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +3

Query: 432 RYNSGGRSYNTSRDRVDESYK 494
           R  +  R Y+ SR+R  +SYK
Sbjct: 31  RERTSRRRYSRSREREQKSYK 51


>DQ325062-1|ABD14076.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +3

Query: 432 RYNSGGRSYNTSRDRVDESYK 494
           R  +  R Y+ SR+R  +SYK
Sbjct: 31  RERTSRRRYSRSREREQKSYK 51


>DQ325061-1|ABD14075.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +3

Query: 432 RYNSGGRSYNTSRDRVDESYK 494
           R  +  R Y+ SR+R  +SYK
Sbjct: 31  RERTSRRRYSRSREREQKSYK 51


>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +3

Query: 432 RYNSGGRSYNTSRDRVDESYK 494
           R  +  R Y+ SR+R  +SYK
Sbjct: 280 RERTSRRRYSRSREREQKSYK 300


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +3

Query: 432 RYNSGGRSYNTSRDRVDESYK 494
           R  +  R Y+ SR+R  +SYK
Sbjct: 280 RERTSRRRYSRSREREQKSYK 300


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +3

Query: 432 RYNSGGRSYNTSRDRVDESYK 494
           R  +  R Y+ SR+R  +SYK
Sbjct: 280 RERTSRRRYSRSREREQKSYK 300


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +3

Query: 432 RYNSGGRSYNTSRDRVDESYK 494
           R  +  R Y+ SR+R  +SYK
Sbjct: 280 RERTSRRRYSRSREREQKSYK 300


>AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +3

Query: 432 RYNSGGRSYNTSRDRVDESYK 494
           R  +  R Y+ SR+R  +SYK
Sbjct: 280 RERTSRRRYSRSREREQKSYK 300


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +3

Query: 432 RYNSGGRSYNTSRDRVDESYK 494
           R  +  R Y+ SR+R  +SYK
Sbjct: 280 RERTSRRRYSRSREREQKSYK 300


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +3

Query: 432 RYNSGGRSYNTSRDRVDESYK 494
           R  +  R Y+ SR+R  +SYK
Sbjct: 279 RERTSRRRYSRSREREQKSYK 299


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +3

Query: 432 RYNSGGRSYNTSRDRVDESYK 494
           R  +  R Y+ SR+R  +SYK
Sbjct: 280 RERTSRRRYSRSREREQKSYK 300


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = -3

Query: 507 FDMFFCKIHLLCHDWCCNS 451
           F +  CK+ L C   CC +
Sbjct: 104 FGIHLCKLWLTCDVLCCTA 122


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,511
Number of Sequences: 438
Number of extensions: 2490
Number of successful extensions: 20
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15704448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)