Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0448
(600 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0538 - 4038954-4039444,4040172-4040248,4040838-4040911,404... 33 0.17
06_03_1156 - 28069663-28070393,28070966-28071231,28072023-28072909 32 0.31
10_08_0914 + 21535519-21535797,21535961-21536339,21536425-215365... 31 0.93
10_06_0039 - 9966744-9967535,9968241-9968482,9969021-9969223,996... 30 1.2
05_01_0479 - 3920992-3921513,3921643-3921756,3921905-3922482,392... 29 2.2
04_03_0383 + 15179587-15180162,15180334-15181149,15181548-15182789 29 2.2
04_01_0301 + 4016588-4016627,4016715-4018837 29 2.2
04_04_0076 + 22558105-22558261,22558356-22558405,22559837-225600... 29 2.8
06_03_0610 - 22715637-22716797 29 3.8
02_05_0337 - 28060009-28060716,28061055-28061498,28061732-280617... 29 3.8
01_01_0482 + 3535083-3535194,3535301-3535467 29 3.8
11_01_0675 - 5508815-5511277 28 5.0
05_01_0475 - 3818121-3820565 28 5.0
03_05_0481 + 24764283-24766109 28 5.0
03_02_0411 + 8217324-8218172 28 5.0
12_02_1124 + 26301884-26303725 27 8.7
11_01_0673 - 5491694-5493102,5493386-5493995 27 8.7
08_02_1358 - 26372559-26372887,26373183-26373262,26373287-263734... 27 8.7
05_02_0139 + 7041030-7041188,7041451-7042215,7044133-7044519 27 8.7
02_02_0469 + 10691648-10691692,10691755-10691907,10692043-106920... 27 8.7
01_04_0013 + 15081879-15082370,15093535-15094050 27 8.7
>03_01_0538 -
4038954-4039444,4040172-4040248,4040838-4040911,
4041115-4041203,4041481-4041563,4041645-4042233,
4042915-4043101
Length = 529
Score = 33.1 bits (72), Expect = 0.17
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +3
Query: 21 GQRDACSAGSSGLDGGGTCTSAVACSQL 104
G D C G+ G DG G+C+S VA S L
Sbjct: 19 GYGDGCGEGNGGGDGDGSCSSPVAASPL 46
>06_03_1156 - 28069663-28070393,28070966-28071231,28072023-28072909
Length = 627
Score = 32.3 bits (70), Expect = 0.31
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Frame = +2
Query: 320 SELDNILQPIIDSCTKDSISSGKGWILQHATSHDAGKVISXHLLRKVTQTGAAFTQKLHI 499
+EL ++L + + TK+SI K W +Q + A ++ L +V + Q LHI
Sbjct: 232 AELHDVLTNL--NGTKESIKGAKTWFMQRSPFAPA---LAEALKDRVFALEDSERQ-LHI 285
Query: 500 IYLVNDVLHHC--ARKNAEDL 556
I+LVND+L R N+ DL
Sbjct: 286 IFLVNDILFESLQRRTNSRDL 306
>10_08_0914 +
21535519-21535797,21535961-21536339,21536425-21536568,
21536681-21536730,21536820-21536877,21536979-21537208
Length = 379
Score = 30.7 bits (66), Expect = 0.93
Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = -3
Query: 94 QATAEVQVPPPSRPLDPAEQASR-WPVGALHI 2
+ A +PPP PL+P E SR W V A I
Sbjct: 23 EEAAAAAIPPPQTPLEPMEYLSRSWSVSASEI 54
>10_06_0039 -
9966744-9967535,9968241-9968482,9969021-9969223,
9969333-9970645
Length = 849
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +3
Query: 21 GQRDACSAGSSGLDGGGTCTSAVACS-QLCPASPSSAPT 134
GQR A S G G +GGGT + A A S + AS S P+
Sbjct: 229 GQRSAGSGGGGGGEGGGTWSEASASSPRTTTASRRSLPS 267
>05_01_0479 -
3920992-3921513,3921643-3921756,3921905-3922482,
3922709-3923067,3923132-3923205
Length = 548
Score = 29.5 bits (63), Expect = 2.2
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +1
Query: 118 LPQHPQEIDSITTQDQCAE 174
LP +PQ +D+ TTQ +CA+
Sbjct: 243 LPYNPQSVDNATTQSKCAQ 261
>04_03_0383 +
15179587-15180162,15180334-15181149,15181548-15182789
Length = 877
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/21 (61%), Positives = 13/21 (61%)
Frame = +3
Query: 12 APTGQRDACSAGSSGLDGGGT 74
APTG D S GSSG G GT
Sbjct: 17 APTGHMDGFSQGSSGYGGSGT 37
>04_01_0301 + 4016588-4016627,4016715-4018837
Length = 720
Score = 29.5 bits (63), Expect = 2.2
Identities = 29/153 (18%), Positives = 62/153 (40%), Gaps = 5/153 (3%)
Frame = +2
Query: 134 KKSTASQHRINVLKEQITQSENNLNAQHAVL---IQQQQVKINELVSKAQMESLQIMADE 304
K+ ++ V+ Q + E++L Q+ +L + + K N +V K QME ++ ++
Sbjct: 50 KQLEETKQEAQVISRQKEEVESSLKGQNEMLGLKVLNVEEKYNHMVEKLQMELCALVKEK 109
Query: 305 NNINL--SELDNILQPIIDSCTKDSISSGKGWILQHATSHDAGKVISXHLLRKVTQTGAA 478
+ + +L L+ I KD + S K + A +++ + ++
Sbjct: 110 EKMMMESEDLKRRLEEI--QAKKDLMESEKDMLRSEAMITKQKQIMFEAEIERLNMELVV 167
Query: 479 FTQKLHIIYLVNDVLHHCARKNAEDLKKNLENV 577
T+ + + K EDLK+ E +
Sbjct: 168 LTEAKKAAAKACEAQNDEIMKELEDLKRKFEEL 200
>04_04_0076 +
22558105-22558261,22558356-22558405,22559837-22560044,
22560112-22560237,22560469-22560567,22560729-22561405,
22561483-22561731,22561808-22561936,22562021-22562089,
22562183-22562256,22563086-22563098,22563361-22563468,
22563541-22563651,22563725-22563811,22564043-22564068,
22564840-22564906,22565123-22565212,22565295-22565387,
22565515-22565604,22565699-22565761,22566349-22566447
Length = 894
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/65 (26%), Positives = 34/65 (52%)
Frame = +2
Query: 131 HKKSTASQHRINVLKEQITQSENNLNAQHAVLIQQQQVKINELVSKAQMESLQIMADENN 310
HK+ST + L+ +Q+EN L + + L + ++++ L K + E+ Q + DE
Sbjct: 627 HKESTLRAYHKEELQRIQSQAENELRERLSSLRKDHEIQMKSLTKKHE-ENCQKLQDELE 685
Query: 311 INLSE 325
+ S+
Sbjct: 686 LQKSK 690
>06_03_0610 - 22715637-22716797
Length = 386
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/59 (27%), Positives = 32/59 (54%)
Frame = +2
Query: 167 VLKEQITQSENNLNAQHAVLIQQQQVKINELVSKAQMESLQIMADENNINLSELDNILQ 343
+ K Q+ +++ A H+ ++ + + K+NEL Q+E Q E N+ LS+ +L+
Sbjct: 39 ITKMQMMNTDSMGTADHSSILAELKAKLNELAPLNQLEGCQ---KELNVALSKYLKLLE 94
>02_05_0337 -
28060009-28060716,28061055-28061498,28061732-28061793,
28061896-28062007,28062144-28062263
Length = 481
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = -3
Query: 130 GAEEGEAGQS*LQATAEVQVPPPSRPLDPAEQASRWPVGA 11
G+ G G S A A +Q+PPP PA R GA
Sbjct: 105 GSNTGSGGASAAAAAAAIQIPPPRPKRKPAHPYPRKVDGA 144
>01_01_0482 + 3535083-3535194,3535301-3535467
Length = 92
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +1
Query: 91 LAVNSAPPPLPQHPQEIDSITTQDQ 165
LAV APPP PQH ++TQ+Q
Sbjct: 40 LAVGDAPPPPPQHGAGRRLLSTQNQ 64
>11_01_0675 - 5508815-5511277
Length = 820
Score = 28.3 bits (60), Expect = 5.0
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +1
Query: 118 LPQHPQEIDSITTQDQCAE 174
LP +P++I+ TTQ +CAE
Sbjct: 388 LPANPEKIEDATTQSKCAE 406
>05_01_0475 - 3818121-3820565
Length = 814
Score = 28.3 bits (60), Expect = 5.0
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +1
Query: 118 LPQHPQEIDSITTQDQCAE 174
LP +PQ +D+ TTQ +CA+
Sbjct: 376 LPYNPQIVDNATTQSKCAQ 394
>03_05_0481 + 24764283-24766109
Length = 608
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -3
Query: 445 VXRYDFASIMGCSMLKYPTLS*RNTVLSATVY 350
V RYDF +GC+M+ +P L L A Y
Sbjct: 287 VGRYDFDGQLGCAMIAHPKLDPATGELHALSY 318
>03_02_0411 + 8217324-8218172
Length = 282
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/38 (42%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Frame = +3
Query: 21 GQRDACSAGSSGLDGGGTCTSAVACSQLCPA-SPSSAP 131
G D G G DGGG C + CS A SP S P
Sbjct: 76 GGGDGVGRGREG-DGGGPCAATARCSAATVAVSPRSVP 112
>12_02_1124 + 26301884-26303725
Length = 613
Score = 27.5 bits (58), Expect = 8.7
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -3
Query: 445 VXRYDFASIMGCSMLKYPTL 386
V RYDF +GC+M+ +P L
Sbjct: 289 VGRYDFDGQLGCAMIAHPKL 308
>11_01_0673 - 5491694-5493102,5493386-5493995
Length = 672
Score = 27.5 bits (58), Expect = 8.7
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = +1
Query: 118 LPQHPQEIDSITTQDQCAE 174
LP +P++++ TTQ +CAE
Sbjct: 309 LPANPEKLEDATTQSKCAE 327
>08_02_1358 -
26372559-26372887,26373183-26373262,26373287-26373420,
26373546-26373689,26373809-26373919,26374165-26374305,
26376839-26376964,26377072-26377263
Length = 418
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3
Query: 3 ICNAPTGQRDACSAGSSGLDGGGTCTSAVA 92
I +A +RD +AG G G G C +AVA
Sbjct: 25 INHAELRRRDIATAGGGGGGGDGACATAVA 54
>05_02_0139 + 7041030-7041188,7041451-7042215,7044133-7044519
Length = 436
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = +3
Query: 27 RDACSAGSSGLDGGGTCTSAVACSQLCPASPSSAPT 134
R G SGL+GGG S + S P P APT
Sbjct: 331 RSGMGLGGSGLEGGGVRKSWMTASPSSPV-PPRAPT 365
>02_02_0469 + 10691648-10691692,10691755-10691907,10692043-10692093,
10692162-10692224,10692327-10693031,10693128-10693223,
10693307-10695547
Length = 1117
Score = 27.5 bits (58), Expect = 8.7
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Frame = +2
Query: 173 KEQITQSENNLNAQHAVLIQQQQVKINELVSKAQMESLQIMADEN--NINLSELDNILQP 346
+EQ+ Q++ L +H + + ++ L+SKA +I DE +I + ELD I +
Sbjct: 1016 EEQLKQNKEKLFDKHGIKDSENTLRYAMLMSKAAEICPKICHDEAKCSIFMQELDKIQEK 1075
Query: 347 II 352
+I
Sbjct: 1076 LI 1077
>01_04_0013 + 15081879-15082370,15093535-15094050
Length = 335
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +3
Query: 45 GSSGLDGGGTCTSAVACSQLCPASPSSAPTRNR 143
GS G DG G+ + +Q+ P PS+ NR
Sbjct: 294 GSGGGDGAGSSVQKNSANQVVPIQPSTKEISNR 326
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,444,936
Number of Sequences: 37544
Number of extensions: 295160
Number of successful extensions: 1299
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1251
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1297
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1435654836
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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