Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0448
         (600 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    28   0.20 
AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    25   1.9  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    24   3.3  
AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative 5'-nucleo...    24   4.3  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         23   5.7  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         23   5.7  
AB107248-1|BAE72063.1|  278|Anopheles gambiae Bcl-2 family prote...    23   10.0 

>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 protein.
          Length = 961

 Score = 28.3 bits (60), Expect = 0.20
 Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
 Frame = +2

Query: 200  NLNAQHAVLIQQQQVKINELVSKAQMESLQIMADENNINLSELD-NILQPIIDS-CTKDS 373
            N   QH    QQQQ +  +   + Q +   ++A +  +  S++D    QP+ +S C ++ 
Sbjct: 897  NYRQQHQQQQQQQQQQQQQHEHEQQQQQNSMLATQQRLEASQMDQGTDQPMQESPCNEEK 956

Query: 374  ISSG 385
            I +G
Sbjct: 957  IGAG 960


>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 13/37 (35%), Positives = 24/37 (64%), Gaps = 3/37 (8%)
 Frame = +2

Query: 140 STASQHRINVLKEQIT---QSENNLNAQHAVLIQQQQ 241
           STA++H + VLK+Q+      +  L ++ ++ I+QQQ
Sbjct: 584 STANRHMVQVLKQQLVLEGHDKQFLLSRLSLFIKQQQ 620


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 15/58 (25%), Positives = 28/58 (48%)
 Frame = +2

Query: 161  INVLKEQITQSENNLNAQHAVLIQQQQVKINELVSKAQMESLQIMADENNINLSELDN 334
            +  LK+QI Q +  +N+Q   L  +   + ++L+ +     L+I   EN I     +N
Sbjct: 866  VTALKQQIKQHKEKMNSQSKELKAKYHQR-DKLLKQNDELKLEIKKKENEITKVRNEN 922


>AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative
           5'-nucleotidase protein.
          Length = 570

 Score = 23.8 bits (49), Expect = 4.3
 Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 6/52 (11%)
 Frame = +2

Query: 452 RKVTQTGAAFTQKLHIIY------LVNDVLHHCARKNAEDLKKNLENVVVAM 589
           RKV   GA +  K H++       L N +     RK A++LKK   N++V +
Sbjct: 179 RKVGVIGALY-DKTHLVAQTGMVTLTNSI--EAVRKEAQELKKKNVNIIVVL 227


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.4 bits (48), Expect = 5.7
 Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
 Frame = +1

Query: 100 NSAPPPLPQHPQEIDS-ITTQD 162
           +S+  PLP HP   DS  +TQD
Sbjct: 243 SSSATPLPLHPYHTDSDCSTQD 264


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.4 bits (48), Expect = 5.7
 Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
 Frame = +1

Query: 100 NSAPPPLPQHPQEIDS-ITTQD 162
           +S+  PLP HP   DS  +TQD
Sbjct: 243 SSSATPLPLHPYHTDSDCSTQD 264


>AB107248-1|BAE72063.1|  278|Anopheles gambiae Bcl-2 family protein
           Anob-1 protein.
          Length = 278

 Score = 22.6 bits (46), Expect = 10.0
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +3

Query: 36  CSAGSSGLDGGGTCTSAV 89
           C AGS GL GG     A+
Sbjct: 101 CMAGSGGLGGGAVVREAL 118


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 594,764
Number of Sequences: 2352
Number of extensions: 11446
Number of successful extensions: 35
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58029966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)