Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0448
         (600 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    25   0.43 
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    22   4.0  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    22   4.0  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    22   4.0  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    22   5.3  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    22   5.3  

>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 25.4 bits (53), Expect = 0.43
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = +2

Query: 134 KKSTASQHRINVLKEQITQSENNLNAQHAVLIQQQQVKIN 253
           K +T +Q  I+  KEQ    E N+N  H V  +Q  V  N
Sbjct: 796 KTATTTQPVISSRKEQKKSEEKNIN-DHCVTTEQSVVVTN 834


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -1

Query: 201 LFSD*VICSFSTLILCCDAVDFLWVL 124
           L  D + C+ S L LC  A+D  W +
Sbjct: 113 LTCDVLCCTASILNLCAIALDRYWAI 138


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -1

Query: 201 LFSD*VICSFSTLILCCDAVDFLWVL 124
           L  D + C+ S L LC  A+D  W +
Sbjct: 113 LTCDVLCCTASILNLCAIALDRYWAI 138


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -1

Query: 201 LFSD*VICSFSTLILCCDAVDFLWVL 124
           L  D + C+ S L LC  A+D  W +
Sbjct: 113 LTCDVLCCTASILNLCAIALDRYWAI 138


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 8/29 (27%), Positives = 14/29 (48%)
 Frame = -2

Query: 599 HCKTLQPPHFPNFSXDLLRFCVHNDGVHH 513
           H   L  PH P +S  ++    + +G H+
Sbjct: 266 HALQLYYPHVPEYSSSIIMELHNIEGTHY 294


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 8/29 (27%), Positives = 14/29 (48%)
 Frame = -2

Query: 599 HCKTLQPPHFPNFSXDLLRFCVHNDGVHH 513
           H   L  PH P +S  ++    + +G H+
Sbjct: 281 HALQLYYPHVPEYSSSIIMELHNIEGTHY 309


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,206
Number of Sequences: 438
Number of extensions: 3156
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17604432
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)