Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0448
(600 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g05270.1 68416.m00575 expressed protein similar to endosome-a... 33 0.19
At5g06265.1 68418.m00701 hyaluronan mediated motility receptor-r... 31 0.44
At5g07970.1 68418.m00926 dentin sialophosphoprotein-related cont... 30 1.3
At4g31200.3 68417.m04431 SWAP (Suppressor-of-White-APricot)/surp... 30 1.3
At4g31200.2 68417.m04430 SWAP (Suppressor-of-White-APricot)/surp... 30 1.3
At4g31200.1 68417.m04429 SWAP (Suppressor-of-White-APricot)/surp... 30 1.3
At5g20220.1 68418.m02407 zinc knuckle (CCHC-type) family protein... 29 1.8
At5g66850.1 68418.m08428 protein kinase family protein contains ... 29 2.4
At5g52280.1 68418.m06488 protein transport protein-related low s... 29 2.4
At5g07170.1 68418.m00817 hypothetical protein 29 3.1
At4g24450.1 68417.m03505 starch excess protein-related similar t... 29 3.1
At5g62240.1 68418.m07815 expressed protein various predicted pro... 28 4.1
At5g60600.2 68418.m07603 1-hydroxy-2-methyl-2-(E)-butenyl 4-diph... 28 5.4
At5g60600.1 68418.m07602 1-hydroxy-2-methyl-2-(E)-butenyl 4-diph... 28 5.4
At4g08690.1 68417.m01432 SEC14 cytosolic factor family protein /... 27 7.2
At3g08010.1 68416.m00978 expressed protein 27 7.2
At1g15780.1 68414.m01893 expressed protein 27 7.2
At2g23240.2 68415.m02776 plant EC metallothionein-like family 15... 27 9.5
>At3g05270.1 68416.m00575 expressed protein similar to
endosome-associated protein (EEA1) (GI:1016368) [Homo
sapiens]; similar to smooth muscle myosin heavy chain
(GI:4417214) [Homo sapiens; contains Pfam profile
PF05911: Plant protein of unknown function (DUF869)
Length = 615
Score = 32.7 bits (71), Expect = 0.19
Identities = 17/61 (27%), Positives = 34/61 (55%)
Frame = +2
Query: 149 SQHRINVLKEQITQSENNLNAQHAVLIQQQQVKINELVSKAQMESLQIMADENNINLSEL 328
S+ +I L+ ++ + E L+ + + Q++++ S QME LQ ++ +NLSEL
Sbjct: 379 SKEQIEALQSRLKEIEGKLSEMKKLEAENQELELLLGESGKQMEDLQRQLNKAQVNLSEL 438
Query: 329 D 331
+
Sbjct: 439 E 439
>At5g06265.1 68418.m00701 hyaluronan mediated motility
receptor-related contains weak similarity to hyaluronan
mediated motility receptor (Intracellular hyaluronic
acid binding protein) (Receptor for hyaluronan-mediated
motility) (CD168 antigen) (Swiss-Prot:O75330) [Homo
sapiens]
Length = 106
Score = 31.5 bits (68), Expect = 0.44
Identities = 23/77 (29%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Frame = +2
Query: 131 HKKSTASQHRINVLKEQ--ITQSENNLNAQHAVLIQQQQV-KINELVSKAQMESLQIMAD 301
++ T+S+ I KEQ I Q + ++ + +L Q++++ K+NELV + + LQ +
Sbjct: 28 NESETSSRPLILSDKEQQHIPQGKESVQVKK-ILFQEKKIQKLNELVRDLRRQLLQ-CRN 85
Query: 302 ENNINLSELDNILQPII 352
EN + L+EL+ L ++
Sbjct: 86 ENQVELTELETELDQLL 102
>At5g07970.1 68418.m00926 dentin sialophosphoprotein-related
contains weak similarity to Swiss-Prot:Q9NZW4 dentin
sialophosphoprotein precursor [Homo sapiens]
Length = 1097
Score = 29.9 bits (64), Expect = 1.3
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Frame = +2
Query: 173 KEQITQSENNLNAQHAVLIQQQQVKINELVSKAQMESLQIMA-DENNINLS-ELDNILQP 346
++Q+T ++ L QHA+ Q + +I + + K Q+E+ Q+ + N +N S DN P
Sbjct: 179 RQQMTFNDMQLLKQHAMAKQMHEYQIQQQLQKQQLEARQLNSLHSNAVNGSLSSDNQSHP 238
Query: 347 II 352
I
Sbjct: 239 SI 240
>At4g31200.3 68417.m04431 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein related to DAN26 [Homo
sapiens] gi|1770394|emb|CAA69591
Length = 650
Score = 29.9 bits (64), Expect = 1.3
Identities = 19/54 (35%), Positives = 29/54 (53%)
Frame = +2
Query: 362 TKDSISSGKGWILQHATSHDAGKVISXHLLRKVTQTGAAFTQKLHIIYLVNDVL 523
TK+SI S K W +Q + A ++ L +V + Q +HI+YL ND+L
Sbjct: 285 TKESIKSAKIWFMQRSPFAPA---LAEALRDRVFAMDDSDRQ-MHIVYLANDIL 334
>At4g31200.2 68417.m04430 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein related to DAN26 [Homo
sapiens] gi|1770394|emb|CAA69591
Length = 650
Score = 29.9 bits (64), Expect = 1.3
Identities = 19/54 (35%), Positives = 29/54 (53%)
Frame = +2
Query: 362 TKDSISSGKGWILQHATSHDAGKVISXHLLRKVTQTGAAFTQKLHIIYLVNDVL 523
TK+SI S K W +Q + A ++ L +V + Q +HI+YL ND+L
Sbjct: 285 TKESIKSAKIWFMQRSPFAPA---LAEALRDRVFAMDDSDRQ-MHIVYLANDIL 334
>At4g31200.1 68417.m04429 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein related to DAN26 [Homo
sapiens] gi|1770394|emb|CAA69591
Length = 650
Score = 29.9 bits (64), Expect = 1.3
Identities = 19/54 (35%), Positives = 29/54 (53%)
Frame = +2
Query: 362 TKDSISSGKGWILQHATSHDAGKVISXHLLRKVTQTGAAFTQKLHIIYLVNDVL 523
TK+SI S K W +Q + A ++ L +V + Q +HI+YL ND+L
Sbjct: 285 TKESIKSAKIWFMQRSPFAPA---LAEALRDRVFAMDDSDRQ-MHIVYLANDIL 334
>At5g20220.1 68418.m02407 zinc knuckle (CCHC-type) family protein
contains Pfam domain, PF00098: Zinc knuckle
Length = 393
Score = 29.5 bits (63), Expect = 1.8
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +3
Query: 6 CNAPTGQRDACSAGSSGLDGGGTCTSA 86
C PTG +CS +SG DG G T A
Sbjct: 336 CRKPTGVNPSCSGENSGEDGVGKITYA 362
>At5g66850.1 68418.m08428 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain; identical
to cDNA MAP3K gamma protein kinase GI:2315152
Length = 716
Score = 29.1 bits (62), Expect = 2.4
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +3
Query: 21 GQRDACSAGSSGLDGGGTCTSAVACSQLCPASP 119
G+RD C+ L G TC+S+ A S P +P
Sbjct: 302 GRRDCCNVHPLPLPPGATCSSSSAASVPSPQAP 334
>At5g52280.1 68418.m06488 protein transport protein-related low
similarity to SP|P25386 Intracellular protein transport
protein USO1 {Saccharomyces cerevisiae}
Length = 853
Score = 29.1 bits (62), Expect = 2.4
Identities = 23/79 (29%), Positives = 41/79 (51%)
Frame = +2
Query: 86 SGLQSTLPRLPFLSTHKKSTASQHRINVLKEQITQSENNLNAQHAVLIQQQQVKINELVS 265
S L S L L HK + + I+ LK+QI + L++ + ++Q++ ++EL
Sbjct: 401 SSLNSLLEEAKKLEEHKGMDSGNNEIDTLKQQIEDLDWELDS-YKKKNEEQEILLDELTQ 459
Query: 266 KAQMESLQIMADENNINLS 322
+ ESL+ +EN N+S
Sbjct: 460 --EYESLK---EENYKNVS 473
>At5g07170.1 68418.m00817 hypothetical protein
Length = 542
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = +2
Query: 89 GLQSTLPRLPFLSTHKKSTASQHRINVLKEQITQSENNLN 208
G + T+PR P L T +++ ++ + N EQI + +N+N
Sbjct: 356 GSKVTVPREPNLKTAQRAARNRFKANSAPEQIAKFISNMN 395
>At4g24450.1 68417.m03505 starch excess protein-related similar to
SEX1 [Arabidopsis thaliana] GI:12044358
Length = 1284
Score = 28.7 bits (61), Expect = 3.1
Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Frame = +2
Query: 158 RINVLKEQITQSE-NNLNA-QHAVLIQQQQVKI-NELVSKAQMESLQIMADENNINLS 322
RI+VLK+ + + + L + Q A+L + + NEL++K + E + + DE+ N S
Sbjct: 1026 RISVLKDSLNRGDLTKLKSIQEAILQMSAPMALRNELITKLRSERMPYLGDESGWNRS 1083
>At5g62240.1 68418.m07815 expressed protein various predicted
proteins, Arabidopsis thaliana; expression supported by
MPSS
Length = 366
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +2
Query: 77 YFSSGLQSTLPRLPFLSTHKKSTASQHRINVLKEQITQSEN 199
+ SS + T+P+ P L T ++S + ++N +EQI S +
Sbjct: 192 HVSSRAKLTVPKEPNLRTAERSERHRSKVNTQREQIATSNS 232
>At5g60600.2 68418.m07603 1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase, putative / GcpE family protein
similar to GcpE [Plasmodium falciparum] GI:13094969;
contains Pfam profile PF04551: GcpE protein; supporting
cDNA gi|27462471|gb|AF434673.1
Length = 740
Score = 27.9 bits (59), Expect = 5.4
Identities = 9/34 (26%), Positives = 18/34 (52%)
Frame = +2
Query: 266 KAQMESLQIMADENNINLSELDNILQPIIDSCTK 367
+AQ E++ DE L ++ + P+++ C K
Sbjct: 195 RAQFETIDYTEDEYQKELQHIEQVFTPLVEKCKK 228
>At5g60600.1 68418.m07602 1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase, putative / GcpE family protein
similar to GcpE [Plasmodium falciparum] GI:13094969;
contains Pfam profile PF04551: GcpE protein; supporting
cDNA gi|27462471|gb|AF434673.1
Length = 741
Score = 27.9 bits (59), Expect = 5.4
Identities = 9/34 (26%), Positives = 18/34 (52%)
Frame = +2
Query: 266 KAQMESLQIMADENNINLSELDNILQPIIDSCTK 367
+AQ E++ DE L ++ + P+++ C K
Sbjct: 195 RAQFETIDYTEDEYQKELQHIEQVFTPLVEKCKK 228
>At4g08690.1 68417.m01432 SEC14 cytosolic factor family protein /
phosphoglyceride transfer family protein contains Pfam
PF00650: CRAL/TRIO domain; similar to
polyphosphoinositide binding protein Ssh2p (GI:2739046)
[Glycine max]; similar to SEC14-like protein (GB:U82515)
[D. discoideum]
Length = 301
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +2
Query: 293 MADENNINLSELDNILQPIIDSCTKDSISSGKGWILQHATSHDAGK 430
M +++ L+ L+ I+ +DS + S+S G H +SHD +
Sbjct: 253 MKEDDKKRLASLEGIVSASLDSLSILSVSDGTASNSAHPSSHDVSE 298
>At3g08010.1 68416.m00978 expressed protein
Length = 374
Score = 27.5 bits (58), Expect = 7.2
Identities = 22/90 (24%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Frame = +2
Query: 101 TLPRLPFLSTHKKSTASQHRIN--VLKEQITQSENNLNAQHAVLIQQQQV--KINELVSK 268
+LPR+P S+ K + H + L ++ +L + ++Q+V ++ E
Sbjct: 15 SLPRIPKPSSFTKPIKTHHLFSSETLLKRCRFVSRSLPESSLSITKEQEVANEVEEDDPT 74
Query: 269 AQMESLQIMADENNINLSELDNILQPIIDS 358
+++ L +D ++I ELD +PI+DS
Sbjct: 75 SELSYLDPESDADSIKEWELDFCSRPILDS 104
>At1g15780.1 68414.m01893 expressed protein
Length = 1335
Score = 27.5 bits (58), Expect = 7.2
Identities = 15/59 (25%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Frame = +2
Query: 131 HKKSTASQHRINVLKEQITQ---SENNLNAQHAVLIQQQQVKINELVSKAQMESLQIMA 298
+ S ++Q ++ L+ + Q S + L QH Q QQ+++ + + QM+ Q+ A
Sbjct: 798 NNSSASAQSGLSTLQSNVNQPQLSSSLLQHQHLKQQQDQQMQLKQQFQQRQMQQQQLQA 856
>At2g23240.2 68415.m02776 plant EC metallothionein-like family 15
protein identical to EC protein homolog 2 (SP:Q42377)
{Arabidopsis thaliana}; identical to an EST:
GB:X92116:ATECPRHOM; contains a vertebrate
metallothionein signature (PS00203); contains Pfam
profile PF02068: Plant PEC family metallothionein
Length = 84
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/55 (23%), Positives = 20/55 (36%)
Frame = +3
Query: 6 CNAPTGQRDACSAGSSGLDGGGTCTSAVACSQLCPASPSSAPTRNRQHHNTGSMC 170
C +P ++C S GG + C + C +P + P Q G C
Sbjct: 19 CPSPCPGGESCRLMMSEASGGDQEHNTCPCGEHCGCNPCNCPKTQTQTSAKGCTC 73
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,005,892
Number of Sequences: 28952
Number of extensions: 221885
Number of successful extensions: 779
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 759
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 776
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1187288784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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