Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0445
         (423 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000D5689E Cluster: PREDICTED: similar to CG17142-PA...    36   0.45 
UniRef50_Q54131 Cluster: Orf17.4(M32) protein; n=1; Salmonella e...    34   1.4  
UniRef50_Q16IZ7 Cluster: Putative uncharacterized protein; n=1; ...    34   1.4  
UniRef50_A1JRP9 Cluster: Putative inner membrane protein; n=1; Y...    33   2.4  
UniRef50_A1A6Y0 Cluster: IP17231p; n=1; Drosophila melanogaster|...    33   3.2  
UniRef50_Q184P7 Cluster: Putative membrane protein; n=2; Clostri...    32   4.2  
UniRef50_UPI00015C41B9 Cluster: hypothetical protein SGO_0776; n...    31   9.7  

>UniRef50_UPI0000D5689E Cluster: PREDICTED: similar to CG17142-PA,
           isoform A; n=1; Tribolium castaneum|Rep: PREDICTED:
           similar to CG17142-PA, isoform A - Tribolium castaneum
          Length = 1090

 Score = 35.5 bits (78), Expect = 0.45
 Identities = 15/35 (42%), Positives = 24/35 (68%), Gaps = 2/35 (5%)
 Frame = +1

Query: 325 KLCYNL-SYIYYWYHWTQWLVLWNVF-CDQADLNN 423
           ++C++  SYI  W +W QWL++ +VF C Q  L+N
Sbjct: 549 QICHSWRSYIQQWENWLQWLIIISVFCCVQPSLDN 583


>UniRef50_Q54131 Cluster: Orf17.4(M32) protein; n=1; Salmonella
           enterica|Rep: Orf17.4(M32) protein - Salmonella enterica
          Length = 367

 Score = 33.9 bits (74), Expect = 1.4
 Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
 Frame = -3

Query: 250 LSFYKFHWVIRKYILPCF*F*LCTFQSTLLHVNNSY---LQTLFSVSYYIL*LALNFHEF 80
           +SFY F +VIR  I     F +    + +L+V+ SY    QT+ S SYY   L ++    
Sbjct: 201 MSFYIFGYVIRNQIYNLLNFYVFILLTVILYVSKSYGFSTQTIMSWSYYPDGLIMSV--I 258

Query: 79  GVQIGNYALNFFTL 38
              IG YA+ F +L
Sbjct: 259 NALIGIYAVFFISL 272


>UniRef50_Q16IZ7 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 221

 Score = 33.9 bits (74), Expect = 1.4
 Identities = 12/27 (44%), Positives = 22/27 (81%)
 Frame = +2

Query: 248 QDRWREMDNVSKRWKLIYRAPMDNVLN 328
           ++R+R+ DNV + +++IYRAPM+  L+
Sbjct: 50  EERYRKKDNVPEEYRIIYRAPMEYYLS 76


>UniRef50_A1JRP9 Cluster: Putative inner membrane protein; n=1;
           Yersinia enterocolitica subsp. enterocolitica 8081|Rep:
           Putative inner membrane protein - Yersinia
           enterocolitica serotype O:8 / biotype 1B (strain 8081)
          Length = 105

 Score = 33.1 bits (72), Expect = 2.4
 Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
 Frame = -2

Query: 269 PFLSIDLELLQISLGDSQIHLAVLLILIM-YLPVDVIARKQFIFTNIVFSQLLHFIA 102
           PF     +L +ISLG   +HL  LL+ I+ ++  D +  + F+F  IV   ++H +A
Sbjct: 34  PFKIAIAQLKRISLGMIFLHLLFLLLAIVAFITDDSLQFESFVFVAIVVIIMIHIVA 90


>UniRef50_A1A6Y0 Cluster: IP17231p; n=1; Drosophila
           melanogaster|Rep: IP17231p - Drosophila melanogaster
           (Fruit fly)
          Length = 96

 Score = 32.7 bits (71), Expect = 3.2
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = +1

Query: 112 CNN*LKTMFVNMNCLRAITSTGRYIIKIKSTARCIC 219
           CNN    + +N  C + +   G+Y + I   A+CIC
Sbjct: 24  CNNDCSRIGINFLCGKTVRKAGKYAVPIGILAKCIC 59


>UniRef50_Q184P7 Cluster: Putative membrane protein; n=2;
           Clostridium difficile|Rep: Putative membrane protein -
           Clostridium difficile (strain 630)
          Length = 162

 Score = 32.3 bits (70), Expect = 4.2
 Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
 Frame = -2

Query: 230 LGDSQIHLAVLLILIMYLPVDVIARKQF--IFTNIVFSQLLH 111
           L D  I L+V+++  + LPV  I   +   +FTNI FSQLL+
Sbjct: 13  LKDENIFLSVVMVCFLILPVLYIVYLELTSLFTNISFSQLLN 54


>UniRef50_UPI00015C41B9 Cluster: hypothetical protein SGO_0776; n=1;
           Streptococcus gordonii str. Challis substr. CH1|Rep:
           hypothetical protein SGO_0776 - Streptococcus gordonii
           str. Challis substr. CH1
          Length = 120

 Score = 31.1 bits (67), Expect = 9.7
 Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
 Frame = -2

Query: 194 ILIMYLPVDVIARKQFIFTNI-VFSQLLHFIAST*FS*IWG 75
           IL++YLP+D I  K  +  NI +FS L+  + S  ++ I+G
Sbjct: 23  ILLIYLPLDSIVSKSLMVGNILIFSPLVTLLVSLLYAVIYG 63


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 387,557,646
Number of Sequences: 1657284
Number of extensions: 6954539
Number of successful extensions: 14536
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 14279
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14530
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 19810951153
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)