Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0445
         (423 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132949-37|CAB70100.3|  285|Caenorhabditis elegans Hypothetical...    30   0.79 
AL132949-4|CAB70101.2|  439|Caenorhabditis elegans Hypothetical ...    30   0.79 
Z81453-6|CAH04639.1|  283|Caenorhabditis elegans Hypothetical pr...    29   1.8  
AC090999-3|AAK26147.1|  536|Caenorhabditis elegans Hypothetical ...    28   2.4  
Z81453-4|CAB03794.1|  283|Caenorhabditis elegans Hypothetical pr...    27   4.2  
U00048-5|AAB53832.2|  621|Caenorhabditis elegans Hypothetical pr...    27   4.2  
U00048-4|AAM15547.1|  751|Caenorhabditis elegans Hypothetical pr...    27   4.2  
Z81454-4|CAD89725.1|  483|Caenorhabditis elegans Hypothetical pr...    27   5.5  
AF101316-2|AAC69230.1|  692|Caenorhabditis elegans Hypothetical ...    27   7.3  
Z83221-5|CAB05706.2|  578|Caenorhabditis elegans Hypothetical pr...    26   9.7  
Z74035-3|CAA98481.1|  808|Caenorhabditis elegans Hypothetical pr...    26   9.7  
AF125955-11|AAK71367.1|  178|Caenorhabditis elegans Hypothetical...    26   9.7  

>AL132949-37|CAB70100.3|  285|Caenorhabditis elegans Hypothetical
           protein Y53F4B.4a protein.
          Length = 285

 Score = 29.9 bits (64), Expect = 0.79
 Identities = 12/32 (37%), Positives = 22/32 (68%)
 Frame = -3

Query: 301 VY*FPSFRNVIHFSPSILSFYKFHWVIRKYIL 206
           VY  P   N+I F+P+I +FY++  V ++Y++
Sbjct: 32  VYVDPHVENLIIFAPNIQNFYEYWMVEQRYLI 63


>AL132949-4|CAB70101.2|  439|Caenorhabditis elegans Hypothetical
           protein Y53F4B.4b protein.
          Length = 439

 Score = 29.9 bits (64), Expect = 0.79
 Identities = 12/32 (37%), Positives = 22/32 (68%)
 Frame = -3

Query: 301 VY*FPSFRNVIHFSPSILSFYKFHWVIRKYIL 206
           VY  P   N+I F+P+I +FY++  V ++Y++
Sbjct: 186 VYVDPHVENLIIFAPNIQNFYEYWMVEQRYLI 217


>Z81453-6|CAH04639.1|  283|Caenorhabditis elegans Hypothetical
           protein B0250.10 protein.
          Length = 283

 Score = 28.7 bits (61), Expect = 1.8
 Identities = 20/72 (27%), Positives = 37/72 (51%)
 Frame = -2

Query: 329 SLXHCPLALCILISIV*KRYPFLSIDLELLQISLGDSQIHLAVLLILIMYLPVDVIARKQ 150
           S+  C L   +LISI  ++   +++ + L     G   ++  V+LIL +Y  +  I+   
Sbjct: 16  SVFICYLNFLLLISIFWRKKIPVNLHMMLTYCRFGVDLVYTVVILILKIYFLLTQIS-TD 74

Query: 149 FIFTNIVFSQLL 114
           FI  N+ FS ++
Sbjct: 75  FIIKNVHFSLVI 86


>AC090999-3|AAK26147.1|  536|Caenorhabditis elegans Hypothetical
           protein Y82E9BR.7 protein.
          Length = 536

 Score = 28.3 bits (60), Expect = 2.4
 Identities = 15/38 (39%), Positives = 23/38 (60%)
 Frame = +1

Query: 112 CNN*LKTMFVNMNCLRAITSTGRYIIKIKSTARCICES 225
           C+   +T+ V++N  + IT T  Y I + ST RC C+S
Sbjct: 29  CDPYTQTISVDLNA-QLITITNLYGICVLSTDRCACQS 65


>Z81453-4|CAB03794.1|  283|Caenorhabditis elegans Hypothetical
           protein B0250.6 protein.
          Length = 283

 Score = 27.5 bits (58), Expect = 4.2
 Identities = 23/74 (31%), Positives = 38/74 (51%)
 Frame = -2

Query: 317 CPLALCILISIV*KRYPFLSIDLELLQISLGDSQIHLAVLLILIMYLPVDVIARKQFIFT 138
           C L   +LISI  ++   +++ + L     G   ++  VLLIL +Y  +  I+   FI  
Sbjct: 20  CYLNFLLLISIFWRKRIPVNLHMMLTYCRFGVDLVYTIVLLILKIYYMLTRIS-NDFIIK 78

Query: 137 NIVFSQLLHFIAST 96
           N+ F  LL F A++
Sbjct: 79  NLYF--LLVFPAAS 90


>U00048-5|AAB53832.2|  621|Caenorhabditis elegans Hypothetical
           protein C05D11.7a protein.
          Length = 621

 Score = 27.5 bits (58), Expect = 4.2
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = -3

Query: 304 SVY*FPSFRNVIHFSPSILSFYKFHWVIRKYILPCF 197
           SVY   SF +VI F+ S  + Y+FH+     ++  F
Sbjct: 498 SVYDVDSFEHVIDFTKSHEALYEFHYRDENQVMKTF 533


>U00048-4|AAM15547.1|  751|Caenorhabditis elegans Hypothetical
           protein C05D11.7b protein.
          Length = 751

 Score = 27.5 bits (58), Expect = 4.2
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = -3

Query: 304 SVY*FPSFRNVIHFSPSILSFYKFHWVIRKYILPCF 197
           SVY   SF +VI F+ S  + Y+FH+     ++  F
Sbjct: 516 SVYDVDSFEHVIDFTKSHEALYEFHYRDENQVMKTF 551


>Z81454-4|CAD89725.1|  483|Caenorhabditis elegans Hypothetical
           protein B0391.6 protein.
          Length = 483

 Score = 27.1 bits (57), Expect = 5.5
 Identities = 8/27 (29%), Positives = 18/27 (66%)
 Frame = +2

Query: 251 DRWREMDNVSKRWKLIYRAPMDNVLNF 331
           ++W ++ N+   WK+  R P+++ L+F
Sbjct: 370 EQWLQVKNIKMYWKVDGRIPLEHFLHF 396


>AF101316-2|AAC69230.1|  692|Caenorhabditis elegans Hypothetical
           protein F52F10.4 protein.
          Length = 692

 Score = 26.6 bits (56), Expect = 7.3
 Identities = 15/65 (23%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
 Frame = -3

Query: 319 IVHWRSVY*FPSFRNVIHFSPS--ILSFYKFHWVIRKYILPCF*F*LCTFQSTLLHVNNS 146
           IVHW  +Y + +   V+H+S +  + ++      +  Y+L    F  C F+  +L +   
Sbjct: 590 IVHWMVLYYYLNVGGVLHYSSAWQVFTYIAIPATLLSYVLAF--FWSCLFEVPILKLEKM 647

Query: 145 YLQTL 131
            ++ L
Sbjct: 648 LIEKL 652


>Z83221-5|CAB05706.2|  578|Caenorhabditis elegans Hypothetical
           protein C49A1.9 protein.
          Length = 578

 Score = 26.2 bits (55), Expect = 9.7
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = +1

Query: 163 ITSTGRYIIKIKSTARCICESPNEICRSSRSME 261
           +TS  + I ++ S A+C    P+ I    +SME
Sbjct: 174 VTSVNQCITQVDSVAKCKASEPSAILSGLQSME 206


>Z74035-3|CAA98481.1|  808|Caenorhabditis elegans Hypothetical
           protein F47G9.4 protein.
          Length = 808

 Score = 26.2 bits (55), Expect = 9.7
 Identities = 10/29 (34%), Positives = 19/29 (65%)
 Frame = +2

Query: 242 EAQDRWREMDNVSKRWKLIYRAPMDNVLN 328
           E Q+ W+E  +  +R ++IYR  ++ +LN
Sbjct: 429 EMQEIWQEQLDRVRRQQIIYREKVEEILN 457


>AF125955-11|AAK71367.1|  178|Caenorhabditis elegans Hypothetical
           protein F46E10.11 protein.
          Length = 178

 Score = 26.2 bits (55), Expect = 9.7
 Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 3/31 (9%)
 Frame = +1

Query: 148 NCLRAITSTGRYIIKIKSTARCI---CESPN 231
           NC  A  ST  Y  +I+S  RCI   C  PN
Sbjct: 64  NCNTATCSTSSYCQQIRSNWRCINGCCRVPN 94


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,274,033
Number of Sequences: 27780
Number of extensions: 179725
Number of successful extensions: 439
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 427
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 439
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 692685370
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)