Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0444
         (638 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       26   0.88 
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    25   2.0  
AY724802-1|AAW50311.1|  134|Anopheles gambiae G protein alpha su...    23   8.2  
AY724801-1|AAW50310.1|  134|Anopheles gambiae G protein alpha su...    23   8.2  

>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 26.2 bits (55), Expect = 0.88
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -1

Query: 239 QEECFHLSGEIDESFYLYFDF 177
           QE+   L  E D  FY+Y+DF
Sbjct: 746 QEDLLLLRNETDYKFYVYYDF 766


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +3

Query: 279 LVREDNNELKCELQRKEELLRRHYDK 356
           L++ED N LK E+Q  EE  +  Y K
Sbjct: 173 LLKEDYNRLKHEMQMAEEETQFTYQK 198


>AY724802-1|AAW50311.1|  134|Anopheles gambiae G protein alpha
           subunit AgOn protein.
          Length = 134

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 11/34 (32%), Positives = 21/34 (61%)
 Frame = +3

Query: 252 LLSAMKPELLVREDNNELKCELQRKEELLRRHYD 353
           +L AM P L +   NNE +C+ +   ++++R +D
Sbjct: 71  ILRAM-PNLSIAFGNNERECDAKMVFDVVQRMHD 103


>AY724801-1|AAW50310.1|  134|Anopheles gambiae G protein alpha
           subunit AgOa protein.
          Length = 134

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 11/34 (32%), Positives = 21/34 (61%)
 Frame = +3

Query: 252 LLSAMKPELLVREDNNELKCELQRKEELLRRHYD 353
           +L AM P L +   NNE +C+ +   ++++R +D
Sbjct: 71  ILRAM-PNLSIAFGNNERECDAKMVFDVVQRMHD 103


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 505,606
Number of Sequences: 2352
Number of extensions: 7834
Number of successful extensions: 27
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62723250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)