Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0442
         (326 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    22   1.9  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    21   4.3  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    20   5.7  
DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      20   7.6  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    20   7.6  

>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.8 bits (44), Expect = 1.9
 Identities = 14/44 (31%), Positives = 19/44 (43%)
 Frame = -2

Query: 133 RWRITGLWAIVTEASLLLSRCVTAGEIERRGPKPAPGATRSPPP 2
           R R+    A+V E +         G +   GP+P P  T  PPP
Sbjct: 175 RGRVAAAAAMVAETASFHHDAAGYG-LRNYGPEPVPS-TPYPPP 216


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 20.6 bits (41), Expect = 4.3
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = -2

Query: 40  PKPAPGATRSPPP 2
           P+PAP +  +P P
Sbjct: 258 PRPAPASRNAPEP 270


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 20.2 bits (40), Expect = 5.7
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = +1

Query: 124 SATYGRARSKSSNSPADETHSTQSAHR 204
           SATY  + + S  SPA     T   HR
Sbjct: 207 SATYTNSANSSIWSPASIDSFTLEQHR 233


>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 19.8 bits (39), Expect = 7.6
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = +2

Query: 74  TGEKERCLCDYCPEAR 121
           +GE+E  +  +CP+A+
Sbjct: 93  SGEREASVSLFCPKAK 108


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 19.8 bits (39), Expect = 7.6
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +3

Query: 222 GFHWLCRNRKKFLIKKD 272
           G  WL RN+K   I+ D
Sbjct: 511 GNPWLFRNQKDMFIELD 527


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,907
Number of Sequences: 336
Number of extensions: 1678
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  6261139
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)