Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0442
(326 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ437529-1|ABD92708.1| 641|Homo sapiens DNA helicase PIF1 protein. 35 0.051
AY498716-1|AAS77398.1| 641|Homo sapiens PIF1/RRM3 DNA helicase-... 35 0.051
AB185927-1|BAE47455.1| 707|Homo sapiens PIF1 DNA helicase isofo... 35 0.051
AB185926-1|BAE47454.1| 641|Homo sapiens PIF1 DNA helicase isofo... 35 0.051
BC117211-1|AAI17212.1| 979|Homo sapiens NLRP3 protein protein. 34 0.089
AY422168-1|AAQ98889.1| 977|Homo sapiens cryopyrin deletion 4 is... 34 0.089
AY092033-1|AAM14669.1| 922|Homo sapiens NALP3 intermediate isof... 34 0.089
AY051117-2|AAL12498.1| 920|Homo sapiens cryopyrin protein. 34 0.089
AY051117-1|AAL12497.1| 1034|Homo sapiens cryopyrin protein. 34 0.089
AL606804-11|CAI17155.1| 977|Homo sapiens NLR family, pyrin doma... 34 0.089
AL606804-10|CAI17153.1| 1036|Homo sapiens NLR family, pyrin doma... 34 0.089
AL606804-9|CAI17154.1| 922|Homo sapiens NLR family, pyrin domai... 34 0.089
AF468522-1|AAL78632.1| 1036|Homo sapiens NALP3 long isoform prot... 34 0.089
AF427617-1|AAL33911.1| 920|Homo sapiens cryopyrin protein. 34 0.089
AF420469-1|AAL65136.1| 1034|Homo sapiens PYRIN-containing APAF1-... 34 0.089
AF418985-1|AAL14640.2| 719|Homo sapiens NALP3 short isoform pro... 34 0.089
AF410477-1|AAL33908.1| 1034|Homo sapiens cryopyrin protein. 34 0.089
AB208891-1|BAD92128.1| 983|Homo sapiens Cryopyrin deletion 4 is... 34 0.089
AJ549246-1|CAD70489.1| 105|Homo sapiens putative DYT3 protein p... 29 2.5
AF117755-1|AAD22033.1| 2212|Homo sapiens thyroid hormone recepto... 27 3.1
D83783-1|BAA12112.1| 2124|Homo sapiens KIAA0192 protein. 27 3.1
AB102668-1|BAC81137.1| 2027|Homo sapiens TNRC11 protein. 27 3.1
AF132033-1|AAD44162.1| 2023|Homo sapiens OPA-containing protein ... 27 3.1
AF071309-1|AAC83163.1| 2023|Homo sapiens OPA-containing protein ... 27 3.1
U80742-1|AAB91440.1| 652|Homo sapiens CAGH45 protein. 27 3.3
AL163202-1|CAB90395.1| 396|Homo sapiens PRED65 protein. 29 4.4
>DQ437529-1|ABD92708.1| 641|Homo sapiens DNA helicase PIF1 protein.
Length = 641
Score = 35.1 bits (77), Expect = 0.051
Identities = 15/17 (88%), Positives = 17/17 (100%)
Frame = +1
Query: 226 FTGSAGTGKSFLLKRIV 276
FTGSAGTGKS+LLKRI+
Sbjct: 226 FTGSAGTGKSYLLKRIL 242
>AY498716-1|AAS77398.1| 641|Homo sapiens PIF1/RRM3 DNA
helicase-like protein protein.
Length = 641
Score = 35.1 bits (77), Expect = 0.051
Identities = 15/17 (88%), Positives = 17/17 (100%)
Frame = +1
Query: 226 FTGSAGTGKSFLLKRIV 276
FTGSAGTGKS+LLKRI+
Sbjct: 226 FTGSAGTGKSYLLKRIL 242
>AB185927-1|BAE47455.1| 707|Homo sapiens PIF1 DNA helicase isoform
beta protein.
Length = 707
Score = 35.1 bits (77), Expect = 0.051
Identities = 15/17 (88%), Positives = 17/17 (100%)
Frame = +1
Query: 226 FTGSAGTGKSFLLKRIV 276
FTGSAGTGKS+LLKRI+
Sbjct: 226 FTGSAGTGKSYLLKRIL 242
>AB185926-1|BAE47454.1| 641|Homo sapiens PIF1 DNA helicase isoform
alpha protein.
Length = 641
Score = 35.1 bits (77), Expect = 0.051
Identities = 15/17 (88%), Positives = 17/17 (100%)
Frame = +1
Query: 226 FTGSAGTGKSFLLKRIV 276
FTGSAGTGKS+LLKRI+
Sbjct: 226 FTGSAGTGKSYLLKRIL 242
>BC117211-1|AAI17212.1| 979|Homo sapiens NLRP3 protein protein.
Length = 979
Score = 34.3 bits (75), Expect = 0.089
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +1
Query: 199 HRKPVHDRVFTGSAGTGKSFLLKRIVADF 285
H +PVH VF G+AG GK+ L ++++ D+
Sbjct: 215 HSEPVHTVVFQGAAGIGKTILARKMMLDW 243
>AY422168-1|AAQ98889.1| 977|Homo sapiens cryopyrin deletion 4
isoform protein.
Length = 977
Score = 34.3 bits (75), Expect = 0.089
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +1
Query: 199 HRKPVHDRVFTGSAGTGKSFLLKRIVADF 285
H +PVH VF G+AG GK+ L ++++ D+
Sbjct: 213 HSEPVHTVVFQGAAGIGKTILARKMMLDW 241
>AY092033-1|AAM14669.1| 922|Homo sapiens NALP3 intermediate isoform
protein.
Length = 922
Score = 34.3 bits (75), Expect = 0.089
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +1
Query: 199 HRKPVHDRVFTGSAGTGKSFLLKRIVADF 285
H +PVH VF G+AG GK+ L ++++ D+
Sbjct: 215 HSEPVHTVVFQGAAGIGKTILARKMMLDW 243
>AY051117-2|AAL12498.1| 920|Homo sapiens cryopyrin protein.
Length = 920
Score = 34.3 bits (75), Expect = 0.089
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +1
Query: 199 HRKPVHDRVFTGSAGTGKSFLLKRIVADF 285
H +PVH VF G+AG GK+ L ++++ D+
Sbjct: 213 HSEPVHTVVFQGAAGIGKTILARKMMLDW 241
>AY051117-1|AAL12497.1| 1034|Homo sapiens cryopyrin protein.
Length = 1034
Score = 34.3 bits (75), Expect = 0.089
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +1
Query: 199 HRKPVHDRVFTGSAGTGKSFLLKRIVADF 285
H +PVH VF G+AG GK+ L ++++ D+
Sbjct: 213 HSEPVHTVVFQGAAGIGKTILARKMMLDW 241
>AL606804-11|CAI17155.1| 977|Homo sapiens NLR family, pyrin domain
containing 3 protein.
Length = 977
Score = 34.3 bits (75), Expect = 0.089
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +1
Query: 199 HRKPVHDRVFTGSAGTGKSFLLKRIVADF 285
H +PVH VF G+AG GK+ L ++++ D+
Sbjct: 213 HSEPVHTVVFQGAAGIGKTILARKMMLDW 241
>AL606804-10|CAI17153.1| 1036|Homo sapiens NLR family, pyrin domain
containing 3 protein.
Length = 1036
Score = 34.3 bits (75), Expect = 0.089
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +1
Query: 199 HRKPVHDRVFTGSAGTGKSFLLKRIVADF 285
H +PVH VF G+AG GK+ L ++++ D+
Sbjct: 215 HSEPVHTVVFQGAAGIGKTILARKMMLDW 243
>AL606804-9|CAI17154.1| 922|Homo sapiens NLR family, pyrin domain
containing 3 protein.
Length = 922
Score = 34.3 bits (75), Expect = 0.089
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +1
Query: 199 HRKPVHDRVFTGSAGTGKSFLLKRIVADF 285
H +PVH VF G+AG GK+ L ++++ D+
Sbjct: 215 HSEPVHTVVFQGAAGIGKTILARKMMLDW 243
>AF468522-1|AAL78632.1| 1036|Homo sapiens NALP3 long isoform
protein.
Length = 1036
Score = 34.3 bits (75), Expect = 0.089
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +1
Query: 199 HRKPVHDRVFTGSAGTGKSFLLKRIVADF 285
H +PVH VF G+AG GK+ L ++++ D+
Sbjct: 215 HSEPVHTVVFQGAAGIGKTILARKMMLDW 243
>AF427617-1|AAL33911.1| 920|Homo sapiens cryopyrin protein.
Length = 920
Score = 34.3 bits (75), Expect = 0.089
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +1
Query: 199 HRKPVHDRVFTGSAGTGKSFLLKRIVADF 285
H +PVH VF G+AG GK+ L ++++ D+
Sbjct: 213 HSEPVHTVVFQGAAGIGKTILARKMMLDW 241
>AF420469-1|AAL65136.1| 1034|Homo sapiens PYRIN-containing
APAF1-like protein 1 protein.
Length = 1034
Score = 34.3 bits (75), Expect = 0.089
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +1
Query: 199 HRKPVHDRVFTGSAGTGKSFLLKRIVADF 285
H +PVH VF G+AG GK+ L ++++ D+
Sbjct: 213 HSEPVHTVVFQGAAGIGKTILARKMMLDW 241
>AF418985-1|AAL14640.2| 719|Homo sapiens NALP3 short isoform
protein.
Length = 719
Score = 34.3 bits (75), Expect = 0.089
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +1
Query: 199 HRKPVHDRVFTGSAGTGKSFLLKRIVADF 285
H +PVH VF G+AG GK+ L ++++ D+
Sbjct: 215 HSEPVHTVVFQGAAGIGKTILARKMMLDW 243
>AF410477-1|AAL33908.1| 1034|Homo sapiens cryopyrin protein.
Length = 1034
Score = 34.3 bits (75), Expect = 0.089
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +1
Query: 199 HRKPVHDRVFTGSAGTGKSFLLKRIVADF 285
H +PVH VF G+AG GK+ L ++++ D+
Sbjct: 213 HSEPVHTVVFQGAAGIGKTILARKMMLDW 241
>AB208891-1|BAD92128.1| 983|Homo sapiens Cryopyrin deletion 4
isoform variant protein.
Length = 983
Score = 34.3 bits (75), Expect = 0.089
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +1
Query: 199 HRKPVHDRVFTGSAGTGKSFLLKRIVADF 285
H +PVH VF G+AG GK+ L ++++ D+
Sbjct: 219 HSEPVHTVVFQGAAGIGKTILARKMMLDW 247
>AJ549246-1|CAD70489.1| 105|Homo sapiens putative DYT3 protein
protein.
Length = 105
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/41 (39%), Positives = 19/41 (46%)
Frame = -2
Query: 223 PGRVRAXGAHSACCGSRLRGSCWTSTGRVRRWRITGLWAIV 101
PGR A S C GS W ST RVR + LW ++
Sbjct: 62 PGRPCRRRAASPCSCCGWNGSTWLSTCRVRLSTSSTLWLLI 102
>AF117755-1|AAD22033.1| 2212|Homo sapiens thyroid hormone
receptor-associated protein complex component TRAP230
protein.
Length = 2212
Score = 27.1 bits (57), Expect(2) = 3.1
Identities = 12/42 (28%), Positives = 20/42 (47%)
Frame = +2
Query: 5 GRRACSPRCWFWSASLNLSRRNTTGEKERCLCDYCPEARDPP 130
G + +P W W ++ + RR GE+++ L Y R P
Sbjct: 1728 GLKPSAPLSWGWFGTVRVDRRVARGEEQQRLLLYHTHLRPRP 1769
Score = 20.6 bits (41), Expect(2) = 3.1
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +2
Query: 113 EARDPPPTDAPG 148
+A +PP TD PG
Sbjct: 1797 KAPEPPKTDKPG 1808
>D83783-1|BAA12112.1| 2124|Homo sapiens KIAA0192 protein.
Length = 2124
Score = 27.1 bits (57), Expect(2) = 3.1
Identities = 12/42 (28%), Positives = 20/42 (47%)
Frame = +2
Query: 5 GRRACSPRCWFWSASLNLSRRNTTGEKERCLCDYCPEARDPP 130
G + +P W W ++ + RR GE+++ L Y R P
Sbjct: 1640 GLKPSAPLSWGWFGTVRVDRRVARGEEQQRLLLYHTHLRPRP 1681
Score = 20.6 bits (41), Expect(2) = 3.1
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +2
Query: 113 EARDPPPTDAPG 148
+A +PP TD PG
Sbjct: 1709 KAPEPPKTDKPG 1720
>AB102668-1|BAC81137.1| 2027|Homo sapiens TNRC11 protein.
Length = 2027
Score = 27.1 bits (57), Expect(2) = 3.1
Identities = 12/42 (28%), Positives = 20/42 (47%)
Frame = +2
Query: 5 GRRACSPRCWFWSASLNLSRRNTTGEKERCLCDYCPEARDPP 130
G + +P W W ++ + RR GE+++ L Y R P
Sbjct: 1540 GLKPSAPLSWGWFGTVRVDRRVARGEEQQRLLLYHTHLRPRP 1581
Score = 20.6 bits (41), Expect(2) = 3.1
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +2
Query: 113 EARDPPPTDAPG 148
+A +PP TD PG
Sbjct: 1609 KAPEPPKTDKPG 1620
>AF132033-1|AAD44162.1| 2023|Homo sapiens OPA-containing protein
protein.
Length = 2023
Score = 27.1 bits (57), Expect(2) = 3.1
Identities = 12/42 (28%), Positives = 20/42 (47%)
Frame = +2
Query: 5 GRRACSPRCWFWSASLNLSRRNTTGEKERCLCDYCPEARDPP 130
G + +P W W ++ + RR GE+++ L Y R P
Sbjct: 1540 GLKPSAPLSWGWFGTVRVDRRVARGEEQQRLLLYHTHLRPRP 1581
Score = 20.6 bits (41), Expect(2) = 3.1
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +2
Query: 113 EARDPPPTDAPG 148
+A +PP TD PG
Sbjct: 1609 KAPEPPKTDKPG 1620
>AF071309-1|AAC83163.1| 2023|Homo sapiens OPA-containing protein
protein.
Length = 2023
Score = 27.1 bits (57), Expect(2) = 3.1
Identities = 12/42 (28%), Positives = 20/42 (47%)
Frame = +2
Query: 5 GRRACSPRCWFWSASLNLSRRNTTGEKERCLCDYCPEARDPP 130
G + +P W W ++ + RR GE+++ L Y R P
Sbjct: 1540 GLKPSAPLSWGWFGTVRVDRRVARGEEQQRLLLYHTHLRPRP 1581
Score = 20.6 bits (41), Expect(2) = 3.1
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +2
Query: 113 EARDPPPTDAPG 148
+A +PP TD PG
Sbjct: 1609 KAPEPPKTDKPG 1620
>U80742-1|AAB91440.1| 652|Homo sapiens CAGH45 protein.
Length = 652
Score = 27.1 bits (57), Expect(2) = 3.3
Identities = 12/42 (28%), Positives = 20/42 (47%)
Frame = +2
Query: 5 GRRACSPRCWFWSASLNLSRRNTTGEKERCLCDYCPEARDPP 130
G + +P W W ++ + RR GE+++ L Y R P
Sbjct: 165 GLKPSAPLSWGWFGTVRVDRRVARGEEQQRLLLYHTHLRPRP 206
Score = 20.6 bits (41), Expect(2) = 3.3
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +2
Query: 113 EARDPPPTDAPG 148
+A +PP TD PG
Sbjct: 234 KAPEPPKTDKPG 245
>AL163202-1|CAB90395.1| 396|Homo sapiens PRED65 protein.
Length = 396
Score = 28.7 bits (61), Expect = 4.4
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +2
Query: 38 WSASLNLSRRNTTGEKERCLCDYCPEA 118
WS++L + +R TGEK C C+ C +A
Sbjct: 163 WSSNLTIHKRIHTGEKP-CKCEECGKA 188
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,850,178
Number of Sequences: 237096
Number of extensions: 1215199
Number of successful extensions: 5695
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 4865
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5695
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1685725862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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