Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0442
         (326 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    22   2.2  
AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    22   2.2  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    21   2.9  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        20   6.6  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        20   6.6  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        20   6.6  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            20   8.8  

>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 21.8 bits (44), Expect = 2.2
 Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
 Frame = -3

Query: 321 PVYAVGIVTSVGKVC--HNPF**ETFSCSCRASENPVVYGL 205
           P + V IVTS  K C     F   T+     ++ NP++Y +
Sbjct: 287 PFFCVNIVTSYCKTCISGRAFQVLTWLGYSNSAFNPIIYSI 327


>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 21.8 bits (44), Expect = 2.2
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -1

Query: 95  GIAPSLPLCYGGRD 54
           G+A  +  CYGGR+
Sbjct: 258 GVADLIATCYGGRN 271


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 21.4 bits (43), Expect = 2.9
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +2

Query: 101 DYCPEARDPPPTDAPG 148
           +Y P++  PPP D  G
Sbjct: 658 EYPPDSDPPPPDDISG 673


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 20.2 bits (40), Expect = 6.6
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 272 ILFNKKLFPVPAEPV 228
           +L N+K   VPA PV
Sbjct: 346 MLLNEKTLAVPAPPV 360


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 20.2 bits (40), Expect = 6.6
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 272 ILFNKKLFPVPAEPV 228
           +L N+K   VPA PV
Sbjct: 346 MLLNEKTLAVPAPPV 360


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 20.2 bits (40), Expect = 6.6
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 272 ILFNKKLFPVPAEPV 228
           +L N+K   VPA PV
Sbjct: 346 MLLNEKTLAVPAPPV 360


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 19.8 bits (39), Expect = 8.8
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = -2

Query: 88 LLLSRCVTAGEIERRGPKPAPG 23
          LL    + AGEI    P  APG
Sbjct: 8  LLALLTLAAGEIAHNDPHFAPG 29


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,965
Number of Sequences: 438
Number of extensions: 1911
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7217694
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)