Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0442
(326 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g26380.1 68417.m03795 DC1 domain-containing protein contains ... 30 0.42
At5g23700.1 68418.m02778 hypothetical protein 29 0.97
At5g05010.1 68418.m00532 clathrin adaptor complexes medium subun... 29 0.97
At3g30520.1 68416.m03863 hypothetical protein 28 1.3
At5g40440.1 68418.m04904 mitogen-activated protein kinase kinase... 27 2.2
At3g20210.1 68416.m02561 vacuolar processing enzyme, putative / ... 27 3.0
At4g28510.1 68417.m04078 prohibitin, putative similar to SP|P241... 27 3.9
At5g52040.2 68418.m06459 arginine/serine-rich splicing factor RS... 26 5.2
At5g52040.1 68418.m06458 arginine/serine-rich splicing factor RS... 26 5.2
At3g48860.2 68416.m05337 expressed protein 26 5.2
At3g48860.1 68416.m05336 expressed protein 26 5.2
At3g20550.1 68416.m02601 forkhead-associated domain-containing p... 26 5.2
At5g66960.1 68418.m08442 prolyl oligopeptidase family protein si... 26 6.8
At5g16930.1 68418.m01984 AAA-type ATPase family protein contains... 26 6.8
At2g46320.1 68415.m05761 mitochondrial substrate carrier family ... 26 6.8
At2g19120.1 68415.m02232 tRNA-splicing endonuclease positive eff... 26 6.8
At1g79000.1 68414.m09212 p300/CBP acetyltransferase-related prot... 26 6.8
At5g50920.1 68418.m06315 ATP-dependent Clp protease ATP-binding ... 25 9.0
At4g29380.1 68417.m04197 protein kinase family protein / WD-40 r... 25 9.0
At3g63050.1 68416.m07082 expressed protein 25 9.0
At3g48870.1 68416.m05338 ATP-dependent Clp protease ATP-binding ... 25 9.0
At3g18370.1 68416.m02336 C2 domain-containing protein contains P... 25 9.0
At2g41440.1 68415.m05120 expressed protein 25 9.0
At2g38440.1 68415.m04721 expressed protein 25 9.0
>At4g26380.1 68417.m03795 DC1 domain-containing protein contains Pfam
profile PF03107: DC1 domain
Length = 1016
Score = 29.9 bits (64), Expect = 0.42
Identities = 14/29 (48%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
Frame = +3
Query: 186 HAECAPXART--RPGFHWLCRNRKKFLIK 266
H EC RPG W+C N KK LIK
Sbjct: 961 HIECMLGVALYIRPGSSWICFNNKKILIK 989
>At5g23700.1 68418.m02778 hypothetical protein
Length = 572
Score = 28.7 bits (61), Expect = 0.97
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +1
Query: 112 RGP*SATYGRARSKSSNSPADETHSTQSAHRKPV 213
R P S YGR S+SSN + S AHR +
Sbjct: 4 RRPSSPVYGRQWSRSSNGTESRSPSMSPAHRNQI 37
>At5g05010.1 68418.m00532 clathrin adaptor complexes medium
subunit-related contains pfam profile: PF00928 adaptor
complexes medium subunit family
Length = 527
Score = 28.7 bits (61), Expect = 0.97
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +3
Query: 3 GGGERVAPGAGFGPRRSISPAVTQRERRSDASVT 104
GGG G+GFG + P T+ + RS +SVT
Sbjct: 202 GGGGGYGSGSGFGMISDVDPINTKPKDRSRSSVT 235
>At3g30520.1 68416.m03863 hypothetical protein
Length = 397
Score = 28.3 bits (60), Expect = 1.3
Identities = 26/88 (29%), Positives = 35/88 (39%), Gaps = 1/88 (1%)
Frame = +3
Query: 3 GGGERVAPGAGFG-PRRSISPAVTQRERRSDASVTIAQRPVIRHLRTRPVEVQQLPRRRD 179
GG RV+ G+G G RR S T ++ S S QR + LR R + +
Sbjct: 192 GGTSRVSIGSGSGGSRRRQSFETTIQD--SITSFGEFQRQSFQQLRPRAFDQDDYDEFKK 249
Query: 180 PQHAECAPXARTRPGFHWLCRNRKKFLI 263
+ A FHW C N K L+
Sbjct: 250 AEAIFTALDLPKHTRFHWACINALKELV 277
>At5g40440.1 68418.m04904 mitogen-activated protein kinase kinase
(MAPKK), putative (MKK3) similar to NPK2 [Nicotiana
tabacum] gi|862342|dbj|BAA06731; mitogen-activated
protein kinase kinase (MAPKK) family, PMID:12119167
Length = 520
Score = 27.5 bits (58), Expect = 2.2
Identities = 11/42 (26%), Positives = 26/42 (61%)
Frame = +1
Query: 151 KSSNSPADETHSTQSAHRKPVHDRVFTGSAGTGKSFLLKRIV 276
K ++S DE+ S+++ ++ H+ G+ G+G S +++R +
Sbjct: 60 KCTSSHVDESESSETTYQCASHEMRVFGAIGSGASSVVQRAI 101
>At3g20210.1 68416.m02561 vacuolar processing enzyme, putative /
asparaginyl endopeptidase, putative similar to
asparaginyl endopeptidase (VmPE-1) [Vigna mungo]
GI:4589396; contains Pfam profile PF01650: Peptidase C13
family; identical to cDNA vacuolar processing enzyme
delta preproprotein (At3g20210) GI:24850432
Length = 466
Score = 27.1 bits (57), Expect = 3.0
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +2
Query: 47 SLNLSRRNTTGEKERCLCDYCPEARDPPPTD 139
+LN+ KE YCPE+ PPP++
Sbjct: 219 NLNIYAVTAANSKESSWGVYCPESYPPPPSE 249
>At4g28510.1 68417.m04078 prohibitin, putative similar to SP|P24142
Prohibitin (B-cell receptor associated protein 32) (BAP
32) {Rattus norvegicus}; contains Pfam profile PF01145:
SPFH domain / Band 7 family
Length = 288
Score = 26.6 bits (56), Expect = 3.9
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +3
Query: 111 QRPVIRHLRTRPVEVQQLPRRRDPQHAECAPXARTRP 221
+RPVI +R RP V+ RD Q + TRP
Sbjct: 71 ERPVIYDVRARPYLVESTSGSRDLQMVKIGLRVLTRP 107
>At5g52040.2 68418.m06459 arginine/serine-rich splicing factor RSP41
(RSP41) nearly identical to SP|P92966
Arginine/serine-rich splicing factor RSP41 {Arabidopsis
thaliana}
Length = 357
Score = 26.2 bits (55), Expect = 5.2
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -2
Query: 61 GEIERRGPKPAPGATRSPPP 2
G + R P+ G +RSPPP
Sbjct: 258 GAVRNRSPRKGRGESRSPPP 277
>At5g52040.1 68418.m06458 arginine/serine-rich splicing factor RSP41
(RSP41) nearly identical to SP|P92966
Arginine/serine-rich splicing factor RSP41 {Arabidopsis
thaliana}
Length = 356
Score = 26.2 bits (55), Expect = 5.2
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -2
Query: 61 GEIERRGPKPAPGATRSPPP 2
G + R P+ G +RSPPP
Sbjct: 258 GAVRNRSPRKGRGESRSPPP 277
>At3g48860.2 68416.m05337 expressed protein
Length = 577
Score = 26.2 bits (55), Expect = 5.2
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 124 SATYGRARSKSSNSPADETHSTQSAHRK 207
S YGR S+SSNS + + AHRK
Sbjct: 8 SPVYGRQWSESSNSTEATSPAMSPAHRK 35
>At3g48860.1 68416.m05336 expressed protein
Length = 494
Score = 26.2 bits (55), Expect = 5.2
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 124 SATYGRARSKSSNSPADETHSTQSAHRK 207
S YGR S+SSNS + + AHRK
Sbjct: 8 SPVYGRQWSESSNSTEATSPAMSPAHRK 35
>At3g20550.1 68416.m02601 forkhead-associated domain-containing
protein / FHA domain-containing protein weak similarity
to SP|Q28147 Nuclear inhibitor of protein phosphatase-1
(NIPP-1) (Protein phosphatase 1, regulatory inhibitor
subunit 8) {Bos taurus}; contains Pfam profile PF00498:
FHA domain
Length = 314
Score = 26.2 bits (55), Expect = 5.2
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +1
Query: 133 YGRARSKSSNSPADETH-STQSAHRKPVHDRVFTGSAGTGKS 255
Y R R + S SP+D +H S++ + + + R GS G S
Sbjct: 92 YSRGRHERSTSPSDRSHRSSRRSPERAIASRHDEGSNARGGS 133
>At5g66960.1 68418.m08442 prolyl oligopeptidase family protein
similar to OpdB [Treponema denticola] GI:13786054;
contains Pfam profiles PF00326: prolyl oligopeptidase
family, PF02897: Prolyl oligopeptidase, N-terminal
beta-propeller domain
Length = 792
Score = 25.8 bits (54), Expect = 6.8
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = +2
Query: 47 SLNLSRRNTTGEKERCLCDYCPEARDPPPTDAP 145
S SR N +++C C Y P PPP P
Sbjct: 6 SRTFSRHNCRFRRQQCRC-YKPPKSPPPPPPPP 37
>At5g16930.1 68418.m01984 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 644
Score = 25.8 bits (54), Expect = 6.8
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +1
Query: 142 ARSKSSNSPADETHSTQSAHRKPVHDRVFTGSAGTGKSFLLKRI 273
A K A+ T +T+ AH+ P + +F G GTGK+ + +
Sbjct: 376 ALEKRIEQLANATANTK-AHQAPFRNILFYGPPGTGKTMAAREL 418
>At2g46320.1 68415.m05761 mitochondrial substrate carrier family
protein contains Pfam profile: PF00153 mitochondrial
carrier protein
Length = 361
Score = 25.8 bits (54), Expect = 6.8
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = -2
Query: 241 LQSQ*KPGRVRAXGAHSACCGSRLRGSCWTSTGRVRRWRITGLWAIVTEASLLLS 77
L+S PG R G+ S C ++ +G+ +R+ + LW T ASL L+
Sbjct: 77 LRSNSAPGMCRITGSASVCSDNQYKGTLDVFYKIIRQEGFSRLWR-GTNASLTLA 130
>At2g19120.1 68415.m02232 tRNA-splicing endonuclease positive
effector-related similar to Endonuclease sen1
(Swiss-Prot:Q92355) [Schizosaccharomyces pombe]; similar
to tRNA-splicing endonuclease positive effector
(Swiss-Prot:Q00416) [Saccharomyces cerevisiae]
Length = 1090
Score = 25.8 bits (54), Expect = 6.8
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +3
Query: 78 ERRSDASVTIAQRPVIRHLRTRPVEVQQL 164
ERRSD + I++ ++RH+R ++ Q+
Sbjct: 633 ERRSDQLLAISRDEILRHMRNLRLQETQI 661
>At1g79000.1 68414.m09212 p300/CBP acetyltransferase-related
protein 2 (PCAT2) contains Pfam domains PF02135: TAZ
zinc finger and PF00569: Zinc finger, ZZ type;
identical to cDNA p300/CBP acetyltransferase-related
protein 2 GI:12597460
Length = 1691
Score = 25.8 bits (54), Expect = 6.8
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +3
Query: 3 GGGERVAPGAGFGPRRSISP 62
GGG A GAG GP R +SP
Sbjct: 25 GGGSAPATGAGLGPSR-VSP 43
>At5g50920.1 68418.m06315 ATP-dependent Clp protease ATP-binding
subunit / ClpC almost identical to ClpC GI:2921158 from
[Arabidopsis thaliana]; contains Pfam profile PF02861:
Clp amino terminal domain; contains Pfam profile
PF00004: ATPase, AAA family; contains Pfam profile
PF02151: UvrB/uvrC motif
Length = 929
Score = 25.4 bits (53), Expect = 9.0
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 205 KPVHDRVFTGSAGTGKSFLLKRIVA 279
+P+ +F+G G GKS L K + A
Sbjct: 636 RPIASFIFSGPTGVGKSELAKALAA 660
>At4g29380.1 68417.m04197 protein kinase family protein / WD-40
repeat family protein contains Pfam PF00400: WD domain,
G-beta repeat; contains Pfam PF00069: Protein kinase
domain; contains PF02985: HEAT repeat; similar to
adaptor protein (GI:1817584) [Homo sapiens]; similar to
VPS15 protein (GI:6103009) [Pichia pastoris]
Length = 1494
Score = 25.4 bits (53), Expect = 9.0
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +2
Query: 95 LCDYCPEARDPPPTDA 142
LCD P RD PP+DA
Sbjct: 508 LCDILPLVRDFPPSDA 523
>At3g63050.1 68416.m07082 expressed protein
Length = 140
Score = 25.4 bits (53), Expect = 9.0
Identities = 10/49 (20%), Positives = 24/49 (48%)
Frame = +3
Query: 15 RVAPGAGFGPRRSISPAVTQRERRSDASVTIAQRPVIRHLRTRPVEVQQ 161
++ GAG +S++ + ++E +SD ++ QR P+ + +
Sbjct: 24 KLMAGAGHKEDKSVTKKLIKKESKSDITIYFKQREESEDNNANPINISR 72
>At3g48870.1 68416.m05338 ATP-dependent Clp protease ATP-binding
subunit (ClpC) identical to AtClpC GI:5360574 from
[Arabidopsis thaliana]; contains Pfam profiles PF02861:
Clp amino terminal domain and PF02151: UvrB/uvrC motif
Length = 952
Score = 25.4 bits (53), Expect = 9.0
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 205 KPVHDRVFTGSAGTGKSFLLKRIVA 279
+P+ +F+G G GKS L K + A
Sbjct: 657 RPIASFIFSGPTGVGKSELAKALAA 681
>At3g18370.1 68416.m02336 C2 domain-containing protein contains Pfam
profile: PF00168 C2 domain
Length = 815
Score = 25.4 bits (53), Expect = 9.0
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -2
Query: 172 LRGSCWTSTGRVRRWRITGLWAIVTEASLLL 80
L G+CW+ +G + R+ W T+ S+LL
Sbjct: 156 LHGTCWSKSGEQKIMRLDFNWD-TTDLSILL 185
>At2g41440.1 68415.m05120 expressed protein
Length = 544
Score = 25.4 bits (53), Expect = 9.0
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +2
Query: 62 RRNTTGEKERCLCDYC 109
RR+ T +K R LCDYC
Sbjct: 358 RRDLTKKKVRELCDYC 373
>At2g38440.1 68415.m04721 expressed protein
Length = 1399
Score = 25.4 bits (53), Expect = 9.0
Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +2
Query: 38 WSASLNLSRRN-TTGEKERCLCDYCPEARDPP 130
W +L L + T+G+ RC+ D E R PP
Sbjct: 110 WHPNLQLEQSVVTSGDLPRCVMDSYEECRGPP 141
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,801,485
Number of Sequences: 28952
Number of extensions: 158169
Number of successful extensions: 681
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 610
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 681
length of database: 12,070,560
effective HSP length: 71
effective length of database: 10,014,968
effective search space used: 370553816
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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