Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0438
         (374 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    23   0.77 
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    23   1.3  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   4.1  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    21   5.4  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    20   7.2  

>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 23.4 bits (48), Expect = 0.77
 Identities = 10/29 (34%), Positives = 19/29 (65%)
 Frame = +2

Query: 47  VRFYCAYLLV*TRNRCTDVLNTNIHSNHL 133
           V + C+Y ++  RN+ +++  + IHS HL
Sbjct: 177 VLYICSYTVL-IRNKISNLNTSLIHSTHL 204


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 22.6 bits (46), Expect = 1.3
 Identities = 10/43 (23%), Positives = 18/43 (41%)
 Frame = +1

Query: 46  CAFLLCLFVSVNTQSVHRRFEYKYSFKPPYLAQKDGSVPFWEY 174
           C  L  +++     S     +  Y+++ PY  QK    P W +
Sbjct: 16  CCILFFIYLYWQQTSNLTTSKLLYTYRQPYPRQKKSHPPQWTW 58


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.0 bits (42), Expect = 4.1
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -3

Query: 279 PPVKVNGLFGPYSPL 235
           PPV  N L G ++PL
Sbjct: 182 PPVTFNSLNGAHTPL 196


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +1

Query: 319 IGADGLVFWYT 351
           +G +GL+ WYT
Sbjct: 11  LGLNGLIDWYT 21


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 362 PRCVVYQNTKPSAPIL 315
           P  V+  NT P +PIL
Sbjct: 124 PSGVISTNTSPPSPIL 139


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,660
Number of Sequences: 336
Number of extensions: 2369
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7828090
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)