Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0438
(374 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_18398| Best HMM Match : Lectin_leg-like (HMM E-Value=2.8026e-45) 68 3e-12
SB_52825| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.043
SB_12151| Best HMM Match : AAA_5 (HMM E-Value=0.00042) 29 1.2
SB_10745| Best HMM Match : 7tm_1 (HMM E-Value=2.2e-31) 29 1.6
SB_50801| Best HMM Match : 7tm_1 (HMM E-Value=1.4e-32) 28 2.1
SB_45212| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.8
SB_45976| Best HMM Match : MBT (HMM E-Value=0) 27 3.7
SB_2549| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.7
SB_22136| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.0
SB_33165| Best HMM Match : ABC_tran (HMM E-Value=0) 27 6.5
SB_57699| Best HMM Match : efhand (HMM E-Value=1e-08) 26 8.7
SB_9796| Best HMM Match : uDENN (HMM E-Value=1.1e-35) 26 8.7
>SB_18398| Best HMM Match : Lectin_leg-like (HMM E-Value=2.8026e-45)
Length = 414
Score = 67.7 bits (158), Expect = 3e-12
Identities = 25/51 (49%), Positives = 36/51 (70%)
Frame = +1
Query: 214 APSLRSQKGAIWTKQPINFDWWEVDIMFKITGRGRIGADGLVFWYTTQRGD 366
A SL SQ G +WT +WWE+++ F++TGRGR+GADGL W+T + G+
Sbjct: 26 AISLPSQIGFMWTANKFTSEWWEIEVSFRVTGRGRVGADGLAIWFTEKPGE 76
>SB_52825| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1141
Score = 33.9 bits (74), Expect = 0.043
Identities = 10/32 (31%), Positives = 21/32 (65%)
Frame = +1
Query: 154 SVPFWEYGGNAIASGESVRLAPSLRSQKGAIW 249
++P W++ G+ S +RL P +S++G++W
Sbjct: 2 TIPNWDFHGSTFVSSNYIRLTPDHQSKQGSLW 33
>SB_12151| Best HMM Match : AAA_5 (HMM E-Value=0.00042)
Length = 4607
Score = 29.1 bits (62), Expect = 1.2
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -1
Query: 131 GGLNEYLYSKRLCTDCVFTLT 69
GGL E+++SKRL DC LT
Sbjct: 4318 GGLREFVFSKRLFHDCAQILT 4338
>SB_10745| Best HMM Match : 7tm_1 (HMM E-Value=2.2e-31)
Length = 354
Score = 28.7 bits (61), Expect = 1.6
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -1
Query: 350 VYQNTKPSAPILPLPVILNMISTSHQSKLMGCLVHIAPFW 231
+Y N+KP +ILNM + L+GC + +A FW
Sbjct: 38 IYVNSKPRMRTTTNILILNMAVSDVIVTLIGCPITVAWFW 77
>SB_50801| Best HMM Match : 7tm_1 (HMM E-Value=1.4e-32)
Length = 354
Score = 28.3 bits (60), Expect = 2.1
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = -1
Query: 350 VYQNTKPSAPILPLPVILNMISTSHQSKLMGCLVHIAPFW 231
+Y N+KP +ILNM L+GC + +A FW
Sbjct: 38 IYVNSKPRMRTTTNILILNMAVGDVTVTLIGCPITVAWFW 77
>SB_45212| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1304
Score = 27.9 bits (59), Expect = 2.8
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Frame = -3
Query: 336 QAVSTYSASAGN--LEHDIDLP-PVKVNGLFGPYSPLLASKRRRETDALP*CYCVSTILP 166
+++S +AS G L+ D P PV+ L P SPL + + ++ D + Y + P
Sbjct: 508 RSISDSAASCGMDILQSDTPRPQPVRKRALEAPVSPLPSKEELQQADKMAKEYSERNLRP 567
Query: 165 KRHR 154
R R
Sbjct: 568 SRKR 571
>SB_45976| Best HMM Match : MBT (HMM E-Value=0)
Length = 839
Score = 27.5 bits (58), Expect = 3.7
Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = -1
Query: 143 CAK*GGLNEYLYSKRLCT-DCVFTLTNRHNK 54
C K G NE+L S R C+ CV T R NK
Sbjct: 233 CGKYGLPNEFLASGRFCSLKCVGVSTGRKNK 263
>SB_2549| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1155
Score = 27.5 bits (58), Expect = 3.7
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -3
Query: 372 GVVASLCGIPEYQAVSTYSASAGNLEHDI 286
GV S CG+PE Q + Y G EH++
Sbjct: 284 GVPESPCGLPEIQQIQRYLGERG-FEHNV 311
>SB_22136| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 91
Score = 27.1 bits (57), Expect = 5.0
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 5/39 (12%)
Frame = -3
Query: 270 KVNGLFGPYSPLLASKRRRETD----ALP*C-YCVSTIL 169
K+ L G YS LL ++ R ETD A+ C +CV T++
Sbjct: 48 KITNLSGKYSKLLHTEIRLETDRANVAIDSCEFCVKTVI 86
>SB_33165| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1310
Score = 26.6 bits (56), Expect = 6.5
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = +1
Query: 31 FKLIVCAFLLCLFV 72
FK++VC +LCLFV
Sbjct: 215 FKIVVCIVMLCLFV 228
>SB_57699| Best HMM Match : efhand (HMM E-Value=1e-08)
Length = 676
Score = 26.2 bits (55), Expect = 8.7
Identities = 22/68 (32%), Positives = 29/68 (42%), Gaps = 3/68 (4%)
Frame = +2
Query: 59 CAYLLV*TRNRCTDVLNT--NIHSNHLI*RKKMDRCRFGSMVETQ*HQGRASVSRRRFEA 232
CA+ V N LN N +NH D RF + T R +SR +FE
Sbjct: 349 CAFAEVIQDNNVVTSLNLAWNEFNNH-------DAARFAEALRTNHTLKRLDLSRNKFEE 401
Query: 233 RRGLY-GP 253
+ G+Y GP
Sbjct: 402 QAGIYLGP 409
>SB_9796| Best HMM Match : uDENN (HMM E-Value=1.1e-35)
Length = 300
Score = 26.2 bits (55), Expect = 8.7
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 193 SGESVRLAPSLRSQKGAIWTKQPINFDW 276
SG+S ++P RS K + + P N DW
Sbjct: 31 SGDSHHVSPLERSYKAKVLSHFPANVDW 58
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,131,367
Number of Sequences: 59808
Number of extensions: 284568
Number of successful extensions: 692
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 671
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 692
length of database: 16,821,457
effective HSP length: 74
effective length of database: 12,395,665
effective search space used: 619783250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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