Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0438
(374 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g11880.1 68414.m01370 expressed protein contains Pfam profile... 29 0.76
At5g19690.1 68418.m02342 oligosaccharyl transferase STT3 subunit... 27 3.1
At3g14067.1 68416.m01775 subtilase family protein contains simil... 27 4.1
At3g09032.1 68416.m01061 expressed protein 27 5.4
At1g73360.1 68414.m08491 homeobox-leucine zipper family protein ... 27 5.4
At5g13310.1 68418.m01529 expressed protein 26 7.1
At5g02910.1 68418.m00234 F-box family protein similar to ribosom... 26 7.1
At1g70140.1 68414.m08071 formin homology 2 domain-containing pro... 26 7.1
At5g52000.1 68418.m06453 importin alpha-1 subunit, putative simi... 26 9.4
At4g17695.1 68417.m02643 myb family transcription factor (KAN3) ... 26 9.4
At1g45207.2 68414.m05186 remorin family protein Since this genom... 26 9.4
At1g31250.1 68414.m03825 proline-rich family protein contains pr... 26 9.4
>At1g11880.1 68414.m01370 expressed protein contains Pfam profile
PF04188: Protein of unknown function (DUF409)
Length = 489
Score = 29.5 bits (63), Expect = 0.76
Identities = 15/55 (27%), Positives = 29/55 (52%)
Frame = +1
Query: 1 HGKVAMEFLNFKLIVCAFLLCLFVSVNTQSVHRRFEYKYSFKPPYLAQKDGSVPF 165
+ K E + K + + LL LF+++ +S+ + ++ + PP L K+ S PF
Sbjct: 8 NSKSRKETILIKYAIFSRLLVLFLTILWRSLLQPYDTSAALNPPCLYHKEDSFPF 62
>At5g19690.1 68418.m02342 oligosaccharyl transferase STT3 subunit
family protein similar to SP|P39007 Oligosaccharyl
transferase STT3 subunit {Saccharomyces cerevisiae};
contains Pfam profile PF02516: Oligosaccharyl
transferase STT3 subunit
Length = 779
Score = 27.5 bits (58), Expect = 3.1
Identities = 12/44 (27%), Positives = 22/44 (50%)
Frame = +1
Query: 43 VCAFLLCLFVSVNTQSVHRRFEYKYSFKPPYLAQKDGSVPFWEY 174
V AF + LF + +SV F+ ++++ K+G FW +
Sbjct: 33 VLAFSIRLFSVIKYESVIHEFDPYFNYRVTQFLSKNGIYEFWNW 76
>At3g14067.1 68416.m01775 subtilase family protein contains
similarity to cucumisin-like serine protease GI:3176874
from [Arabidopsis thaliana]
Length = 777
Score = 27.1 bits (57), Expect = 4.1
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +1
Query: 106 EYKYSFKPPYLAQKDGSVPFWEYGGNAIASGESVRLAP 219
EY+ +FK L GSVP E+G GE V +P
Sbjct: 727 EYEVTFKSVVLGGGVGSVPGHEFGSIEWTDGEHVVKSP 764
>At3g09032.1 68416.m01061 expressed protein
Length = 146
Score = 26.6 bits (56), Expect = 5.4
Identities = 18/47 (38%), Positives = 23/47 (48%)
Frame = -1
Query: 341 NTKPSAPILPLPVILNMISTSHQSKLMGCLVHIAPFWLRSDGARRTL 201
N P A P+ + +S+SH S+ LV I F LRS A R L
Sbjct: 12 NPNPEATDEPIFPKHDGLSSSHHSRRRVVLVGILSFGLRSSPAARKL 58
>At1g73360.1 68414.m08491 homeobox-leucine zipper family protein /
lipid-binding START domain-containing protein
protodermal factor2 (GI:14276060) [Arabidopsis
thaliana]; similar to homeobox protein GI:1173621 from [
Phalaenopsis sp.]
Length = 722
Score = 26.6 bits (56), Expect = 5.4
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = -1
Query: 302 ILNMISTSHQSKLMGCLVHIAPFWLRSDGARRTLSPDAI--AFPPYSQNGTDPSF 144
I+ I+ + +L+ L P W R+DG R L+ + FP S G + +F
Sbjct: 233 IMTGIALTAMEELLRLLQTNEPLWTRTDGCRDILNLGSYENVFPRSSNRGKNQNF 287
>At5g13310.1 68418.m01529 expressed protein
Length = 370
Score = 26.2 bits (55), Expect = 7.1
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 151 GSVPFWEYGGNAIASGESVRLAPSLRSQKGAIWT 252
GS+PF + ++ S AP+ R Q G++WT
Sbjct: 20 GSLPFSRPSSSKFSTSSS---APASRQQSGSVWT 50
>At5g02910.1 68418.m00234 F-box family protein similar to ribosomal
RNA apurinic site specific lyase [Triticum aestivum]
GI:6505722; contains F-box domain Pfam:PF00646
Length = 458
Score = 26.2 bits (55), Expect = 7.1
Identities = 17/53 (32%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
Frame = -2
Query: 256 VWSI*PPSGFEATARDGRSPLMLLRFHHTPKTAPIHLFA--LNKVV*MNICIQ 104
VWS P + D S L F PK HL LN++ +N CI+
Sbjct: 46 VWSETPSLSIDCRRADPNSIDKTLSFFSAPKITSFHLHTTLLNRIDSVNGCIE 98
>At1g70140.1 68414.m08071 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 760
Score = 26.2 bits (55), Expect = 7.1
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = -1
Query: 353 VVYQNTKPSAPILPLPVILNMISTSH 276
+ Y+N K + P+ +P++ STSH
Sbjct: 192 IYYKNKKKTEPVTEIPLLRGRSSTSH 217
>At5g52000.1 68418.m06453 importin alpha-1 subunit, putative similar
to importin alpha-1 subunit (Karyopherin alpha-1
subunit, KAP alpha) [Arabidopsis thaliana]
SWISS-PROT:Q96321
Length = 441
Score = 25.8 bits (54), Expect = 9.4
Identities = 8/19 (42%), Positives = 15/19 (78%)
Frame = -1
Query: 311 LPVILNMISTSHQSKLMGC 255
LP+I NM++ +H++K+ C
Sbjct: 256 LPIISNMLTRNHENKIKKC 274
>At4g17695.1 68417.m02643 myb family transcription factor (KAN3)
contains Pfam profile: PF00249 myb-like DNA-binding
domain; identical to cDNA GARP-like putative
transcription factor KANADI3 (KAN3) GI:15723596
Length = 322
Score = 25.8 bits (54), Expect = 9.4
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = -1
Query: 173 YSQNGTDPSFCAK*GGLNEYLYSKRLCTD--CVFTLTNRHNKNA 48
YS +P F ++ G + S+RL T+ C F L NRH + A
Sbjct: 109 YSSTSPNPFFFSEVNGQHA---SRRLITNPNCSFNLHNRHRRQA 149
>At1g45207.2 68414.m05186 remorin family protein Since this genomic
sequence region is unfinished, the annotated gene may be
missing a stop codon or start codon
Length = 555
Score = 25.8 bits (54), Expect = 9.4
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -1
Query: 227 RSDGARRTLSPDAIAFPPYS 168
+S G+RR SPD+I F P S
Sbjct: 14 KSGGSRRDSSPDSIIFTPES 33
>At1g31250.1 68414.m03825 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965;
similar to prolin rich protein GB:S44189 GI:433706 from
[Zea mays]
Length = 165
Score = 25.8 bits (54), Expect = 9.4
Identities = 10/15 (66%), Positives = 14/15 (93%)
Frame = +1
Query: 49 AFLLCLFVSVNTQSV 93
AFLLCLF+S++ QS+
Sbjct: 9 AFLLCLFLSLSYQSI 23
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,044,463
Number of Sequences: 28952
Number of extensions: 199371
Number of successful extensions: 490
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 487
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 490
length of database: 12,070,560
effective HSP length: 73
effective length of database: 9,957,064
effective search space used: 507810264
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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