Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0437
(428 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0163 - 17380601-17380710,17380796-17380856,17381076-173811... 87 7e-18
07_03_0044 - 12758606-12758676,12758765-12758860,12759197-127592... 82 2e-16
02_01_0041 + 279583-281622,281724-282047,282315-282443,282526-28... 82 2e-16
06_01_0037 - 369498-369568,369668-369760,369889-369991,370061-37... 60 6e-10
12_01_0526 - 4171313-4171417,4171514-4171597,4171688-4171758,417... 58 2e-09
08_02_0759 - 20851828-20851932,20852190-20852285,20853231-208533... 55 2e-08
09_04_0081 - 14400293-14400397,14400953-14401036,14401144-144012... 53 1e-07
02_03_0404 + 18648632-18648669,18649319-18649379,18649449-186494... 41 4e-04
04_03_0767 + 19389337-19389381,19390586-19390643,19390720-193907... 40 0.001
01_03_0030 - 11787280-11787393,11787487-11787714,11788828-117889... 32 0.17
10_03_0040 - 7307108-7307564,7307611-7307915 31 0.52
02_05_1303 + 35572403-35572624,35572744-35572860,35572987-355731... 28 3.7
04_04_0584 + 26381220-26381232,26381583-26381594,26381921-263820... 27 4.9
04_01_0159 - 1824343-1824405,1824485-1824595,1825282-1825448,182... 27 4.9
01_07_0167 - 41613834-41613842,41614060-41615056,41615456-416163... 27 4.9
04_04_1104 - 30928475-30928501,30929008-30929110,30929287-309293... 27 6.4
11_04_0312 - 16259612-16260231,16260264-16262796 27 8.5
10_06_0140 + 11147019-11147791,11148301-11150524 27 8.5
07_01_0024 + 159839-159923,160395-160442,160884-160895,161347-16... 27 8.5
06_01_0501 - 3587390-3587528,3587922-3588031,3588122-3588187,358... 27 8.5
03_04_0006 + 16257288-16259522 27 8.5
>06_03_0163 -
17380601-17380710,17380796-17380856,17381076-17381150,
17381538-17381600,17381679-17381755,17382432-17382515,
17382610-17382654,17382729-17382789,17383658-17384053,
17384220-17384289,17387010-17387083,17387202-17387246,
17387342-17387391,17387846-17387947,17388587-17388620,
17388681-17388758,17388915-17388965,17389082-17389085,
17389182-17389256,17389530-17389624
Length = 549
Score = 86.6 bits (205), Expect = 7e-18
Identities = 41/95 (43%), Positives = 60/95 (63%)
Frame = +2
Query: 143 STELAKRKVTNKLLEHAQNQTVLSTPQWTVQMRYYSSLPSHIKVNLPALSPTMESGSIVS 322
ST + ++ + L Q Q + + + +R + P H+ V +PALSPTM G+I
Sbjct: 111 STAIGPARLLWQQLIGLQQQAMGTVSACSSWIRPTARFPPHLVVGMPALSPTMNQGNIAK 170
Query: 323 WEKKEGDKLTEGDLLCEIETDKATMGFETPEEGYL 427
W K+EG+K+ GD++CEIETDKAT+ FE+ EEGYL
Sbjct: 171 WRKQEGEKIEVGDVICEIETDKATLEFESLEEGYL 205
>07_03_0044 -
12758606-12758676,12758765-12758860,12759197-12759299,
12759379-12759474,12759537-12759603,12759682-12759749,
12759898-12759973,12760112-12760197,12760285-12760361,
12761461-12761533,12761627-12761875,12761997-12762089,
12762218-12762292,12762661-12762716,12763473-12763513,
12763907-12764001,12764085-12764158,12765052-12765145,
12765484-12765519
Length = 541
Score = 81.8 bits (193), Expect = 2e-16
Identities = 34/60 (56%), Positives = 46/60 (76%)
Frame = +2
Query: 248 SSLPSHIKVNLPALSPTMESGSIVSWEKKEGDKLTEGDLLCEIETDKATMGFETPEEGYL 427
+ LP H ++ +P+LSPTM G+I W KKEGDK++ G++LCE+ETDKAT+ E EEGYL
Sbjct: 113 ADLPPHQEIGMPSLSPTMTEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYL 172
>02_01_0041 + 279583-281622,281724-282047,282315-282443,282526-282648,
282768-282923,283224-283349,283426-283560,283815-283942,
284037-284148,284233-284547,284655-284771,284871-285166,
285252-285783,287980-288082,288808-288881,288965-289062,
289340-289380,289977-290032,290170-290244,290377-290469,
290602-290850,290930-291002,291681-291766,291853-291938,
292067-292142,292280-292347,292430-292496,292570-292665,
292741-292843,293214-293309,293396-293466
Length = 2047
Score = 81.8 bits (193), Expect = 2e-16
Identities = 34/60 (56%), Positives = 46/60 (76%)
Frame = +2
Query: 248 SSLPSHIKVNLPALSPTMESGSIVSWEKKEGDKLTEGDLLCEIETDKATMGFETPEEGYL 427
+ LP H ++ +P+LSPTM G+I W KKEGDK++ G++LCE+ETDKAT+ E EEGYL
Sbjct: 1616 ADLPPHQEIGMPSLSPTMTEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYL 1675
>06_01_0037 -
369498-369568,369668-369760,369889-369991,370061-370156,
370227-370293,370379-370446,370606-370681,370890-370975,
371065-371150,371337-371409,371490-371735,371845-371937,
372045-372119,372496-372540,372631-372708,372805-372921,
373865-373894
Length = 500
Score = 60.5 bits (140), Expect = 6e-10
Identities = 25/40 (62%), Positives = 32/40 (80%)
Frame = +2
Query: 308 GSIVSWEKKEGDKLTEGDLLCEIETDKATMGFETPEEGYL 427
G+I W KKEGDK++ G++LCE+ETDKAT+ E EEGYL
Sbjct: 91 GNIARWVKKEGDKVSPGEVLCEVETDKATVEMECMEEGYL 130
>12_01_0526 -
4171313-4171417,4171514-4171597,4171688-4171758,
4171814-4171891,4174482-4174569,4174659-4174850,
4174939-4175802
Length = 493
Score = 58.4 bits (135), Expect = 2e-09
Identities = 26/53 (49%), Positives = 36/53 (67%)
Frame = +2
Query: 269 KVNLPALSPTMESGSIVSWEKKEGDKLTEGDLLCEIETDKATMGFETPEEGYL 427
++ +PALS TM G IVSW EGD+L +GD + +E+DKA M ET +G+L
Sbjct: 51 EIFMPALSSTMTEGKIVSWTASEGDRLAKGDPVVVVESDKADMDVETFHDGFL 103
>08_02_0759 -
20851828-20851932,20852190-20852285,20853231-20853314,
20853411-20853481,20853568-20853655,20853745-20853936,
20854044-20854931
Length = 507
Score = 55.2 bits (127), Expect = 2e-08
Identities = 24/51 (47%), Positives = 34/51 (66%)
Frame = +2
Query: 269 KVNLPALSPTMESGSIVSWEKKEGDKLTEGDLLCEIETDKATMGFETPEEG 421
++ +PALS TM G IVSW EGD++ +GD + +E+DKA M ET +G
Sbjct: 48 EIFMPALSSTMTEGKIVSWSAAEGDRVAKGDAVVVVESDKADMDVETFHDG 98
>09_04_0081 -
14400293-14400397,14400953-14401036,14401144-14401214,
14401293-14401380,14401487-14401678,14401772-14402704
Length = 490
Score = 52.8 bits (121), Expect = 1e-07
Identities = 24/51 (47%), Positives = 34/51 (66%)
Frame = +2
Query: 269 KVNLPALSPTMESGSIVSWEKKEGDKLTEGDLLCEIETDKATMGFETPEEG 421
++ +PALS TM G IVSW EGD++ +GD + +E+DKA M ET +G
Sbjct: 43 EIFMPALSSTMTEGRIVSWTAAEGDRVAKGDPVVVVESDKADMDVETFYDG 93
>02_03_0404 +
18648632-18648669,18649319-18649379,18649449-18649476,
18649787-18649861,18649929-18649984,18650085-18650129,
18650224-18650475,18650586-18650680,18651114-18651204,
18651356-18651466,18651556-18651750,18651827-18652018
Length = 412
Score = 41.1 bits (92), Expect = 4e-04
Identities = 19/66 (28%), Positives = 36/66 (54%)
Frame = +2
Query: 230 VQMRYYSSLPSHIKVNLPALSPTMESGSIVSWEKKEGDKLTEGDLLCEIETDKATMGFET 409
V M + L + +P + ++ G++ ++ KK GD++ + + +IETDK TM +
Sbjct: 34 VFMDAHCQLGDLVDAVVPFMGESITDGTLATFLKKPGDRVEADEPIAQIETDKVTMDVAS 93
Query: 410 PEEGYL 427
PE G +
Sbjct: 94 PEAGII 99
>04_03_0767 +
19389337-19389381,19390586-19390643,19390720-19390759,
19390859-19390926,19391007-19391081,19391161-19391216,
19391317-19391361,19391450-19391701,19391787-19391881,
19392395-19392485,19392578-19392688,19392788-19392982,
19393071-19393262
Length = 440
Score = 39.5 bits (88), Expect = 0.001
Identities = 15/54 (27%), Positives = 33/54 (61%)
Frame = +2
Query: 266 IKVNLPALSPTMESGSIVSWEKKEGDKLTEGDLLCEIETDKATMGFETPEEGYL 427
++ +P + ++ G++ ++ KK GD++ + + +IETDK T+ +PE G +
Sbjct: 74 VEAVVPFMGESVTDGTLANFLKKPGDRVEADEPIAQIETDKVTIDVASPEAGVI 127
>01_03_0030 -
11787280-11787393,11787487-11787714,11788828-11788916,
11789516-11789763,11789858-11790146,11790295-11790454,
11791228-11791404
Length = 434
Score = 32.3 bits (70), Expect = 0.17
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +2
Query: 314 IVSWEKKEGDKLTEGDLLCEIETDKATM 397
++ W EGD++ E LCE+++DKAT+
Sbjct: 52 LLRWFVTEGDQVDEFQRLCEVQSDKATI 79
>10_03_0040 - 7307108-7307564,7307611-7307915
Length = 253
Score = 30.7 bits (66), Expect = 0.52
Identities = 16/54 (29%), Positives = 32/54 (59%)
Frame = +2
Query: 149 ELAKRKVTNKLLEHAQNQTVLSTPQWTVQMRYYSSLPSHIKVNLPALSPTMESG 310
E+A + +++ + + T L PQW + + YSS PS++++ L +L+ + SG
Sbjct: 173 EVASGRRRSQVFDVCSSATRL--PQWRRRQQDYSSTPSNLQLRLGSLTMVISSG 224
>02_05_1303 +
35572403-35572624,35572744-35572860,35572987-35573112,
35573217-35573279,35573837-35573944,35574587-35574664,
35574772-35574864,35575206-35575292,35575429-35575530,
35575617-35575736,35575839-35575901,35575974-35576119,
35576203-35576296,35576399-35576457,35576568-35576607,
35576694-35576785,35576877-35576946,35578172-35578333,
35578477-35578703,35578863-35579070,35579173-35579258,
35579450-35579541,35579674-35579870
Length = 883
Score = 27.9 bits (59), Expect = 3.7
Identities = 11/43 (25%), Positives = 21/43 (48%)
Frame = +2
Query: 218 PQWTVQMRYYSSLPSHIKVNLPALSPTMESGSIVSWEKKEGDK 346
P W + M+ Y PS+ ++ +P L+ + G+ + E K
Sbjct: 325 PPWLINMQRYGPPPSYPQLKIPGLNAPIPPGASFGYRPGEWGK 367
>04_04_0584 +
26381220-26381232,26381583-26381594,26381921-26382028,
26382137-26382217,26382320-26382465,26382550-26382624,
26382709-26382756,26382845-26382994,26383081-26383140,
26383394-26384274,26384674-26385670,26385887-26385895
Length = 859
Score = 27.5 bits (58), Expect = 4.9
Identities = 16/54 (29%), Positives = 31/54 (57%)
Frame = +1
Query: 148 RTGKKESYE*IVRTCTEPDSSIYTTMDCSDEVLFESTITYKGQPSSSFANHGEW 309
+TG +ES+ ++RT +S I TT S E+ + +TY+ S++ ++ E+
Sbjct: 144 QTGGQESFTSLLRTPAFDNSMILTTSRFSPELEEQQDMTYEQHISTTHWSYEEF 197
>04_01_0159 -
1824343-1824405,1824485-1824595,1825282-1825448,
1825853-1826029,1826404-1826656
Length = 256
Score = 27.5 bits (58), Expect = 4.9
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +2
Query: 257 PSHIKVNLPA-LSPTMESGSIVSWEK-KEGDKLTEGDLLCEIETDKAT 394
P + N+ A P M +GSIV E +K T D+LC+IET KA+
Sbjct: 80 PPAFRGNVKARYQPVMFNGSIVYCRTPSEVEKATR-DILCKIETMKAS 126
>01_07_0167 -
41613834-41613842,41614060-41615056,41615456-41616336,
41616437-41616508,41616590-41616649,41616736-41616885,
41616974-41617021,41617107-41617181,41617266-41617411,
41617514-41617594,41617703-41617810,41618046-41618057,
41618137-41618148,41618499-41618546,41619021-41619105
Length = 927
Score = 27.5 bits (58), Expect = 4.9
Identities = 16/54 (29%), Positives = 31/54 (57%)
Frame = +1
Query: 148 RTGKKESYE*IVRTCTEPDSSIYTTMDCSDEVLFESTITYKGQPSSSFANHGEW 309
+TG +ES+ ++RT +S I TT S E+ + +TY+ S++ ++ E+
Sbjct: 188 QTGGQESFTSLLRTPAFDNSMILTTSRFSPELEEQQDMTYEQHISTTHWSYEEF 241
>04_04_1104 -
30928475-30928501,30929008-30929110,30929287-30929340,
30929803-30929895,30930063-30930140,30930416-30930527,
30930618-30930756,30930823-30930910,30930984-30931079,
30931675-30931781,30931874-30932009,30932089-30932186,
30932954-30933047,30933132-30933301,30933749-30933819,
30936066-30936194,30936552-30936654,30936764-30936907,
30937123-30937245,30937482-30937563,30939044-30939120,
30939261-30939315,30939365-30939443,30939544-30939620,
30939739-30939869,30939947-30940120,30940245-30940310,
30940937-30941572
Length = 1113
Score = 27.1 bits (57), Expect = 6.4
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +3
Query: 120 GRTLRGALVQNWQKGK 167
GRT+ G + +NWQ+GK
Sbjct: 317 GRTIAGLIWENWQQGK 332
>11_04_0312 - 16259612-16260231,16260264-16262796
Length = 1050
Score = 26.6 bits (56), Expect = 8.5
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = -3
Query: 297 VGERAGRLTFICDGRLE*YLI*TVHCGVDRTVWFCACS 184
+ +R GRL D +I TV CG D+ W CA S
Sbjct: 364 IAKRCGRLPLALD------VIGTVLCGKDKRYWECALS 395
>10_06_0140 + 11147019-11147791,11148301-11150524
Length = 998
Score = 26.6 bits (56), Expect = 8.5
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +2
Query: 131 TRCISTELAKRKVTNKLLEHAQNQTVLSTPQWTVQMRYYSSLPSHI 268
+RC L K+ + L +H + L+ + V + +YSSLP H+
Sbjct: 360 SRCQQQPLGCAKLCDNLGKHLVTEDTLARMK-RVLVHHYSSLPGHV 404
>07_01_0024 +
159839-159923,160395-160442,160884-160895,161347-161427,
161530-161675,161918-161965,162054-162203,165647-165706,
165788-165859,165960-166409,166640-166839,167239-168236,
168676-168683,169057-169230,169341-169659,169748-169824,
169897-169966,170040-170111,170204-170418,170540-170665,
170751-171046,171133-171157,171163-171303,171400-171498,
171571-171702,171793-171912
Length = 1407
Score = 26.6 bits (56), Expect = 8.5
Identities = 16/54 (29%), Positives = 30/54 (55%)
Frame = +1
Query: 148 RTGKKESYE*IVRTCTEPDSSIYTTMDCSDEVLFESTITYKGQPSSSFANHGEW 309
R G +ES+ ++RT +S I TT S E+ + +TY+ S++ ++ E+
Sbjct: 123 RQGGQESFTSLLRTPAFDNSMILTTSRFSPELEEQQDMTYEQHISTTHWSYEEF 176
>06_01_0501 -
3587390-3587528,3587922-3588031,3588122-3588187,
3588293-3588410,3588499-3588554,3588647-3588766,
3588937-3589035,3589443-3589490,3589534-3589545,
3590353-3590418,3591412-3591471,3592061-3592162,
3592405-3592426,3592959-3593041,3593166-3593293,
3593775-3593881,3594376-3594845
Length = 601
Score = 26.6 bits (56), Expect = 8.5
Identities = 19/74 (25%), Positives = 32/74 (43%)
Frame = +1
Query: 40 LVKNIDNVANNCVTESNLKRWS*ESYTVEHYEVH*YRTGKKESYE*IVRTCTEPDSSIYT 219
L + ANN + E + S +E H TG ++ ++RT E DSS+Y
Sbjct: 412 LTSTNNETANN-IMEGKVSASSSPEELLEQALQH-LETGNQDQAIPLIRTAIEKDSSLYV 469
Query: 220 TMDCSDEVLFESTI 261
+ + LF + +
Sbjct: 470 ALIGMGQTLFSNRL 483
>03_04_0006 + 16257288-16259522
Length = 744
Score = 26.6 bits (56), Expect = 8.5
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +2
Query: 281 PALSPTMESGSIVSWEKKEGDKLTEGDLLCEIETDKATMGFETPEEG 421
PA+SP+ + ++ SW+ K G L +G++ ++ TD M P G
Sbjct: 193 PAVSPSGKRVAVASWQGKPG--LWDGEIE-DLRTDIYVMNVHKPPLG 236
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,323,386
Number of Sequences: 37544
Number of extensions: 223577
Number of successful extensions: 628
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 600
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 628
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 802495716
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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