Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0437
         (428 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023873-1|AAZ86794.1|  512|Drosophila melanogaster AT21758p pro...   125   2e-29
AE014134-1274|AAF52514.1|  512|Drosophila melanogaster CG5261-PB...   125   2e-29
AE014134-1275|AAF52515.1|  421|Drosophila melanogaster CG5261-PA...    90   1e-18
BT003564-1|AAO39568.1|  468|Drosophila melanogaster LP03989p pro...    40   0.001
AY089515-1|AAL90253.1|  468|Drosophila melanogaster GM01350p pro...    40   0.001
AY061469-1|AAL29017.1|  462|Drosophila melanogaster LD43554p pro...    40   0.001
AE014298-2103|AAF48423.1|  462|Drosophila melanogaster CG5599-PA...    40   0.001
AE014297-1281|AAF54625.1|  468|Drosophila melanogaster CG5214-PA...    40   0.001
L35770-1|AAA64525.1|  412|Drosophila melanogaster fringe protein...    29   3.5  
AY070927-1|AAL48549.1|  412|Drosophila melanogaster RE03010p pro...    29   3.5  
AE014296-3445|AAF51658.2|  412|Drosophila melanogaster CG10580-P...    29   3.5  
AY119502-1|AAM50156.1| 2323|Drosophila melanogaster GH12002p pro...    28   6.1  
AE013599-561|AAF59156.2| 2323|Drosophila melanogaster CG11198-PB...    28   6.1  
AE013599-560|AAF59155.2| 2482|Drosophila melanogaster CG11198-PA...    28   6.1  
AE014297-4123|AAF56704.1|  245|Drosophila melanogaster CG13980-P...    27   8.1  

>BT023873-1|AAZ86794.1|  512|Drosophila melanogaster AT21758p
           protein.
          Length = 512

 Score =  125 bits (302), Expect = 2e-29
 Identities = 64/123 (52%), Positives = 87/123 (70%), Gaps = 1/123 (0%)
 Frame = +2

Query: 62  LRTIVLRNQILSDGLKKAIRSNITRCISTELAKRKVTNKLLEHAQNQTVLSTPQWTVQM- 238
           LR+++LR+   +  ++++  + + R +S++L   +    +   ++  T  S   W+    
Sbjct: 15  LRSVLLRSNNATY-VRRSTGNVVVRALSSQLINSRKLQSI--RSKLNTSQSPVTWSYNFA 71

Query: 239 RYYSSLPSHIKVNLPALSPTMESGSIVSWEKKEGDKLTEGDLLCEIETDKATMGFETPEE 418
           R Y++LP HI+V LPALSPTME GSIVSWEKKEGDKL EGDLLCEIETDKATMGFETPEE
Sbjct: 72  RAYANLPEHIRVPLPALSPTMERGSIVSWEKKEGDKLNEGDLLCEIETDKATMGFETPEE 131

Query: 419 GYL 427
           G+L
Sbjct: 132 GFL 134


>AE014134-1274|AAF52514.1|  512|Drosophila melanogaster CG5261-PB,
           isoform B protein.
          Length = 512

 Score =  125 bits (302), Expect = 2e-29
 Identities = 64/123 (52%), Positives = 87/123 (70%), Gaps = 1/123 (0%)
 Frame = +2

Query: 62  LRTIVLRNQILSDGLKKAIRSNITRCISTELAKRKVTNKLLEHAQNQTVLSTPQWTVQM- 238
           LR+++LR+   +  ++++  + + R +S++L   +    +   ++  T  S   W+    
Sbjct: 15  LRSVLLRSNNATY-VRRSTGNVVVRALSSQLINSRKLQSI--RSKLNTSQSPVTWSYNFA 71

Query: 239 RYYSSLPSHIKVNLPALSPTMESGSIVSWEKKEGDKLTEGDLLCEIETDKATMGFETPEE 418
           R Y++LP HI+V LPALSPTME GSIVSWEKKEGDKL EGDLLCEIETDKATMGFETPEE
Sbjct: 72  RAYANLPEHIRVPLPALSPTMERGSIVSWEKKEGDKLNEGDLLCEIETDKATMGFETPEE 131

Query: 419 GYL 427
           G+L
Sbjct: 132 GFL 134


>AE014134-1275|AAF52515.1|  421|Drosophila melanogaster CG5261-PA,
           isoform A protein.
          Length = 421

 Score = 89.8 bits (213), Expect = 1e-18
 Identities = 40/43 (93%), Positives = 41/43 (95%)
 Frame = +2

Query: 299 MESGSIVSWEKKEGDKLTEGDLLCEIETDKATMGFETPEEGYL 427
           ME GSIVSWEKKEGDKL EGDLLCEIETDKATMGFETPEEG+L
Sbjct: 1   MERGSIVSWEKKEGDKLNEGDLLCEIETDKATMGFETPEEGFL 43


>BT003564-1|AAO39568.1|  468|Drosophila melanogaster LP03989p
           protein.
          Length = 468

 Score = 39.9 bits (89), Expect = 0.001
 Identities = 37/112 (33%), Positives = 54/112 (48%), Gaps = 6/112 (5%)
 Frame = +2

Query: 110 KAIRSN-ITRCI---STELAKRKVTNKLL-EHAQNQTVLSTPQWTVQ-MRYYSSLPSHIK 271
           +A+RSN + RCI   S  +A      +LL +   N+   +T   T Q +   SSL S   
Sbjct: 19  RALRSNEVKRCIRQYSRLVACAAQQQQLLRQDGSNRCQEATRLLTWQGIHTTSSLWSEQT 78

Query: 272 VNLPALSPTMESGSIVSWEKKEGDKLTEGDLLCEIETDKATMGFETPEEGYL 427
           VN+P  + ++  G I  +  K GD     + + EIETDK T+    P  G L
Sbjct: 79  VNVPPFADSIAEGDI-KFTCKVGDSFAADEAVMEIETDKTTVAVPAPFSGTL 129


>AY089515-1|AAL90253.1|  468|Drosophila melanogaster GM01350p
           protein.
          Length = 468

 Score = 39.9 bits (89), Expect = 0.001
 Identities = 37/112 (33%), Positives = 54/112 (48%), Gaps = 6/112 (5%)
 Frame = +2

Query: 110 KAIRSN-ITRCI---STELAKRKVTNKLL-EHAQNQTVLSTPQWTVQ-MRYYSSLPSHIK 271
           +A+RSN + RCI   S  +A      +LL +   N+   +T   T Q +   SSL S   
Sbjct: 19  RALRSNEVKRCIRQYSRLVACAAQQQQLLRQDGSNRCQEATRLLTWQGIHTTSSLWSEQT 78

Query: 272 VNLPALSPTMESGSIVSWEKKEGDKLTEGDLLCEIETDKATMGFETPEEGYL 427
           VN+P  + ++  G I  +  K GD     + + EIETDK T+    P  G L
Sbjct: 79  VNVPPFADSIAEGDI-KFTCKVGDSFAADEAVMEIETDKTTVAVPAPFSGTL 129


>AY061469-1|AAL29017.1|  462|Drosophila melanogaster LD43554p
           protein.
          Length = 462

 Score = 39.9 bits (89), Expect = 0.001
 Identities = 18/58 (31%), Positives = 32/58 (55%)
 Frame = +2

Query: 248 SSLPSHIKVNLPALSPTMESGSIVSWEKKEGDKLTEGDLLCEIETDKATMGFETPEEG 421
           SSL   +  NL  +   +   ++  W  KEGD + + D LCE+++DKA++   +  +G
Sbjct: 33  SSLDKTVSFNLSDIGEGIREVTVKEWFVKEGDTVEQFDNLCEVQSDKASVTITSRYDG 90


>AE014298-2103|AAF48423.1|  462|Drosophila melanogaster CG5599-PA
           protein.
          Length = 462

 Score = 39.9 bits (89), Expect = 0.001
 Identities = 18/58 (31%), Positives = 32/58 (55%)
 Frame = +2

Query: 248 SSLPSHIKVNLPALSPTMESGSIVSWEKKEGDKLTEGDLLCEIETDKATMGFETPEEG 421
           SSL   +  NL  +   +   ++  W  KEGD + + D LCE+++DKA++   +  +G
Sbjct: 33  SSLDKTVSFNLSDIGEGIREVTVKEWFVKEGDTVEQFDNLCEVQSDKASVTITSRYDG 90


>AE014297-1281|AAF54625.1|  468|Drosophila melanogaster CG5214-PA
           protein.
          Length = 468

 Score = 39.9 bits (89), Expect = 0.001
 Identities = 37/112 (33%), Positives = 54/112 (48%), Gaps = 6/112 (5%)
 Frame = +2

Query: 110 KAIRSN-ITRCI---STELAKRKVTNKLL-EHAQNQTVLSTPQWTVQ-MRYYSSLPSHIK 271
           +A+RSN + RCI   S  +A      +LL +   N+   +T   T Q +   SSL S   
Sbjct: 19  RALRSNEVKRCIRQYSRLVACAAQQQQLLRQDGSNRCQEATRLLTWQGIHTTSSLWSEQT 78

Query: 272 VNLPALSPTMESGSIVSWEKKEGDKLTEGDLLCEIETDKATMGFETPEEGYL 427
           VN+P  + ++  G I  +  K GD     + + EIETDK T+    P  G L
Sbjct: 79  VNVPPFADSIAEGDI-KFTCKVGDSFAADEAVMEIETDKTTVAVPAPFSGTL 129


>L35770-1|AAA64525.1|  412|Drosophila melanogaster fringe protein
           protein.
          Length = 412

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
 Frame = +2

Query: 68  TIVLRNQILSDGLKKA-IRSNITRCISTELAKRKVTNKLLEHAQNQTVLSTPQ 223
           T+++R  I S       +    T  + TELA+R    +LL     + V +TPQ
Sbjct: 89  TVIIRKDIRSFNFSDIEVSERPTATLLTELARRSRNGELLRDLSQRAVTATPQ 141


>AY070927-1|AAL48549.1|  412|Drosophila melanogaster RE03010p
           protein.
          Length = 412

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
 Frame = +2

Query: 68  TIVLRNQILSDGLKKA-IRSNITRCISTELAKRKVTNKLLEHAQNQTVLSTPQ 223
           T+++R  I S       +    T  + TELA+R    +LL     + V +TPQ
Sbjct: 89  TVIIRKDIRSFNFSDIEVSERPTATLLTELARRSRNGELLRDLSQRAVTATPQ 141


>AE014296-3445|AAF51658.2|  412|Drosophila melanogaster CG10580-PA
           protein.
          Length = 412

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
 Frame = +2

Query: 68  TIVLRNQILSDGLKKA-IRSNITRCISTELAKRKVTNKLLEHAQNQTVLSTPQ 223
           T+++R  I S       +    T  + TELA+R    +LL     + V +TPQ
Sbjct: 89  TVIIRKDIRSFNFSDIEVSERPTATLLTELARRSRNGELLRDLSQRAVTATPQ 141


>AY119502-1|AAM50156.1| 2323|Drosophila melanogaster GH12002p
           protein.
          Length = 2323

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 14/51 (27%), Positives = 26/51 (50%)
 Frame = +2

Query: 269 KVNLPALSPTMESGSIVSWEKKEGDKLTEGDLLCEIETDKATMGFETPEEG 421
           K N P+L  +  +G +++   ++G  +++G    EIE  K  M   + E G
Sbjct: 725 KENDPSLLRSPSAGKLINMIVEDGAHVSKGQAYAEIEVMKMVMTLTSQEAG 775


>AE013599-561|AAF59156.2| 2323|Drosophila melanogaster CG11198-PB,
           isoform B protein.
          Length = 2323

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 14/51 (27%), Positives = 26/51 (50%)
 Frame = +2

Query: 269 KVNLPALSPTMESGSIVSWEKKEGDKLTEGDLLCEIETDKATMGFETPEEG 421
           K N P+L  +  +G +++   ++G  +++G    EIE  K  M   + E G
Sbjct: 725 KENDPSLLRSPSAGKLINMIVEDGAHVSKGQAYAEIEVMKMVMTLTSQEAG 775


>AE013599-560|AAF59155.2| 2482|Drosophila melanogaster CG11198-PA,
            isoform A protein.
          Length = 2482

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 14/51 (27%), Positives = 26/51 (50%)
 Frame = +2

Query: 269  KVNLPALSPTMESGSIVSWEKKEGDKLTEGDLLCEIETDKATMGFETPEEG 421
            K N P+L  +  +G +++   ++G  +++G    EIE  K  M   + E G
Sbjct: 884  KENDPSLLRSPSAGKLINMIVEDGAHVSKGQAYAEIEVMKMVMTLTSQEAG 934


>AE014297-4123|AAF56704.1|  245|Drosophila melanogaster CG13980-PA
           protein.
          Length = 245

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 6/55 (10%)
 Frame = +1

Query: 13  RPAHLDGIVLVKN-IDNVANNCV-----TESNLKRWS*ESYTVEHYEVH*YRTGK 159
           R + L+  VLVK  +D+   +CV     T + L+R++   YT +++E+  Y T K
Sbjct: 18  RSSKLNEAVLVKRAVDDYHKSCVLLGGETGTRLRRYNFSEYTFKNFELFLYETLK 72


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,033,522
Number of Sequences: 53049
Number of extensions: 384684
Number of successful extensions: 852
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 838
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 852
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1334434944
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)