Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0433
(423 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_40594| Best HMM Match : Extensin_2 (HMM E-Value=0.083) 140 3e-34
SB_10357| Best HMM Match : zf-C2H2 (HMM E-Value=9.8e-38) 36 0.014
SB_34562| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.014
SB_45463| Best HMM Match : zf-C2H2 (HMM E-Value=0) 31 0.52
SB_15809| Best HMM Match : zf-C2H2 (HMM E-Value=0) 31 0.52
SB_11426| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.52
SB_39159| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.69
SB_8854| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.69
SB_55441| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.69
SB_16971| Best HMM Match : zf-C2H2 (HMM E-Value=5.8e-36) 30 0.91
SB_44730| Best HMM Match : zf-C2H2 (HMM E-Value=0) 30 0.91
SB_50183| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 1.2
SB_42899| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.2
SB_34420| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.2
SB_38457| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 1.2
SB_27848| Best HMM Match : zf-C2H2 (HMM E-Value=1.49995e-41) 29 2.1
SB_57| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 2.1
SB_13281| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.8
SB_56660| Best HMM Match : zf-C2H2 (HMM E-Value=0) 28 3.7
SB_28794| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.7
SB_16305| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.7
SB_23259| Best HMM Match : zf-C2H2 (HMM E-Value=0) 28 3.7
SB_51905| Best HMM Match : zf-C2H2 (HMM E-Value=0) 27 4.8
SB_46179| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.8
SB_37930| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.8
SB_21010| Best HMM Match : PHD (HMM E-Value=7e-10) 27 4.8
SB_32609| Best HMM Match : zf-C2H2 (HMM E-Value=0) 27 4.8
SB_20696| Best HMM Match : Gam (HMM E-Value=2.1) 27 4.8
SB_11362| Best HMM Match : zf-C2H2 (HMM E-Value=7.9e-32) 27 4.8
SB_43| Best HMM Match : Motile_Sperm (HMM E-Value=0.61) 27 4.8
SB_32644| Best HMM Match : zf-C2H2 (HMM E-Value=0) 27 6.4
SB_14666| Best HMM Match : NHL (HMM E-Value=4.5) 27 6.4
SB_1799| Best HMM Match : zf-C2H2 (HMM E-Value=0) 27 6.4
SB_1728| Best HMM Match : zf-C2H2 (HMM E-Value=0) 27 6.4
SB_46756| Best HMM Match : zf-C2H2 (HMM E-Value=4.60046e-42) 27 6.4
SB_40339| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.4
SB_37978| Best HMM Match : zf-C2H2 (HMM E-Value=0) 27 6.4
SB_34111| Best HMM Match : zf-C2H2 (HMM E-Value=0) 27 6.4
SB_8757| Best HMM Match : zf-C2H2 (HMM E-Value=0) 27 6.4
SB_43276| Best HMM Match : zf-C2H2 (HMM E-Value=0) 27 8.5
SB_32903| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.5
SB_19824| Best HMM Match : zf-C2H2 (HMM E-Value=1.4e-26) 27 8.5
SB_3588| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.5
>SB_40594| Best HMM Match : Extensin_2 (HMM E-Value=0.083)
Length = 440
Score = 140 bits (340), Expect = 3e-34
Identities = 62/97 (63%), Positives = 76/97 (78%), Gaps = 1/97 (1%)
Frame = +1
Query: 133 VGRRRRHP-NLGAGIVTGQFDDEKILIQHQKAKHFKCHICHKKLYTGPGLSIHCMQVHKE 309
+GR+++ P FDDEKILIQHQKAKHFKC ICHKKLYTGPGL+IHC QVHKE
Sbjct: 1 MGRKKKKPMKPWCWYCNRDFDDEKILIQHQKAKHFKCMICHKKLYTGPGLAIHCTQVHKE 60
Query: 310 AIDKVPNSLPNRSNIEIEIYGMEGIPPEDVKEHEKQK 420
+ +PNSLPNR + EIEIYGMEGIP +D+KE ++++
Sbjct: 61 TVSAIPNSLPNRGDPEIEIYGMEGIPEKDLKERQQRQ 97
Score = 46.0 bits (104), Expect = 1e-05
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = +3
Query: 129 MGRKKKKASKPWCWYCNR 182
MGRKKKK KPWCWYCNR
Sbjct: 1 MGRKKKKPMKPWCWYCNR 18
>SB_10357| Best HMM Match : zf-C2H2 (HMM E-Value=9.8e-38)
Length = 509
Score = 35.9 bits (79), Expect = 0.014
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 214 HQKAKHFKCHICHKKLYTGPGLSIHCMQVH 303
H K K FKCHICH++ ++ H M++H
Sbjct: 421 HSKEKPFKCHICHRRFAQSSSVTTH-MRIH 449
>SB_34562| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 978
Score = 35.9 bits (79), Expect = 0.014
Identities = 22/69 (31%), Positives = 33/69 (47%)
Frame = +1
Query: 193 DEKILIQHQKAKHFKCHICHKKLYTGPGLSIHCMQVHKEAIDKVPNSLPNRSNIEIEIYG 372
D I + H + K FKC CHK + H + H +A P+S ++S+ E
Sbjct: 286 DLHIKVVHNRVKAFKCEHCHKVFGHSFDRARHVKKFHSDAKPVTPSSQSDQSHELSE--A 343
Query: 373 MEGIPPEDV 399
+EGI +DV
Sbjct: 344 IEGIQNKDV 352
>SB_45463| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 347
Score = 30.7 bits (66), Expect = 0.52
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +1
Query: 208 IQHQKAKHFKCHICHKKLYTGPGLSIHCMQVHKE 309
+ H K FKCHIC K + L+ H M H E
Sbjct: 276 LTHTGEKPFKCHICGKAFHQVYNLTFH-MHTHNE 308
>SB_15809| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 935
Score = 30.7 bits (66), Expect = 0.52
Identities = 17/65 (26%), Positives = 25/65 (38%)
Frame = +1
Query: 214 HQKAKHFKCHICHKKLYTGPGLSIHCMQVHKEAIDKVPNSLPNRSNIEIEIYGMEGIPPE 393
H K F+C +CHK LS H VH++ + P P + G + P
Sbjct: 478 HTGEKPFECPVCHKAFSQTGNLSKHVRYVHEK--QQRPKEKPRDKKYFCSLCGKAFLCPS 535
Query: 394 DVKEH 408
+ H
Sbjct: 536 SLSMH 540
>SB_11426| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 522
Score = 30.7 bits (66), Expect = 0.52
Identities = 17/56 (30%), Positives = 24/56 (42%)
Frame = +1
Query: 190 DDEKILIQHQKAKHFKCHICHKKLYTGPGLSIHCMQVHKEAIDKVPNSLPNRSNIE 357
DDEK +H K F C C+K + H VHKE+ N + ++E
Sbjct: 294 DDEKPE-RHTTEKLFDCCYCNKNFTAARSVRRHIRAVHKESRSSPENKKSEKKSLE 348
>SB_39159| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 728
Score = 30.3 bits (65), Expect = 0.69
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 214 HQKAKHFKCHICHKKLYTGPGLSIHCMQVHKE 309
H+K K +KC +C K LS H VH++
Sbjct: 658 HKKEKPYKCDVCKKIFGLSSSLSRHIRTVHQD 689
>SB_8854| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 339
Score = 30.3 bits (65), Expect = 0.69
Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
Frame = +1
Query: 205 LIQHQKAKHFKCHICHKKLYTGPGLSIHCMQVHKEAIDKVPNSL--PNRSNIEIEIYGME 378
++ H K +KC IC+ K + L H H DK N + PN I ++ +
Sbjct: 270 ILTHTGEKPYKCSICNWKFISSSNLRTHIRIHHSYFTDKAGNQVTQPNGKPINPDLAKPD 329
Query: 379 GIP 387
+P
Sbjct: 330 TMP 332
>SB_55441| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 694
Score = 30.3 bits (65), Expect = 0.69
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +1
Query: 214 HQKAKHFKCHICHKKLYTGPGLSIHCMQVHKE 309
H + +KC IC KK GLSIH ++H E
Sbjct: 483 HTDERPYKCDICGKKFRQQGGLSIH-KKIHTE 513
Score = 27.1 bits (57), Expect = 6.4
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +1
Query: 214 HQKAKHFKCHICHKKLYTGPGLSIHCMQVH 303
H K ++C IC K L+IH M++H
Sbjct: 539 HSGEKPYRCEICEKSFRDKDSLNIH-MRIH 567
>SB_16971| Best HMM Match : zf-C2H2 (HMM E-Value=5.8e-36)
Length = 477
Score = 29.9 bits (64), Expect = 0.91
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 202 ILIQHQKAKHFKCHICHKKLYTGPGLSIHCMQVH 303
+L H+K + +CH+C K+ L+ H M+VH
Sbjct: 294 VLHVHEKHRPHECHVCQKRFSQSSSLNKH-MRVH 326
>SB_44730| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1346
Score = 29.9 bits (64), Expect = 0.91
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = +1
Query: 205 LIQHQKAKHFKCHICHKKLYTGPGLSIHCMQVHK 306
++ H + + F C C K L HCM VH+
Sbjct: 1188 IVTHSEQRPFSCEQCMKSFNRSGDLRRHCMTVHE 1221
>SB_50183| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 717
Score = 29.5 bits (63), Expect = 1.2
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 205 LIQHQKAKHFKCHICHKKLYTGPGLSIHCMQVH 303
L++H K FKC C K ++ L IH ++VH
Sbjct: 508 LLKHTGEKKFKCAHCPKTFFSSSSLKIH-VRVH 539
>SB_42899| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 490
Score = 29.5 bits (63), Expect = 1.2
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 202 ILIQHQKAKHFKCHICHKKLYTGPGLSIHCMQVH 303
+L H+K + +CH+C K+ L+ H M+VH
Sbjct: 305 VLHVHEKHRPHECHVCKKRFSQSSSLNKH-MRVH 337
>SB_34420| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 544
Score = 29.5 bits (63), Expect = 1.2
Identities = 19/45 (42%), Positives = 19/45 (42%), Gaps = 5/45 (11%)
Frame = +1
Query: 187 FDDEKILIQHQKAKH-----FKCHICHKKLYTGPGLSIHCMQVHK 306
FD L HQK H FKC C K LY L H VHK
Sbjct: 296 FDSYNQLHNHQKTIHGGKNPFKCGHCGKCLYNESYLKEHIRGVHK 340
>SB_38457| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 4303
Score = 29.5 bits (63), Expect = 1.2
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 214 HQKAKHFKCHICHKKLYTGPGLSIHCMQVHKE 309
H+ K KC+ C KK++T G+ H QVH +
Sbjct: 521 HRDEKLVKCNYC-KKIFTKYGMKEHIEQVHNK 551
Score = 27.9 bits (59), Expect = 3.7
Identities = 8/31 (25%), Positives = 19/31 (61%)
Frame = +1
Query: 214 HQKAKHFKCHICHKKLYTGPGLSIHCMQVHK 306
H++++ ++C C L + L++H ++HK
Sbjct: 2391 HERSRPYRCEYCGWHLASKSNLTLHIKRIHK 2421
Score = 26.6 bits (56), Expect = 8.5
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = +1
Query: 196 EKILIQHQKAKHFKCHICHKKLYTGPGLSIHCMQVHKE 309
E + + H+K K + C C K+ T L H H +
Sbjct: 459 EHVKVSHEKVKIYVCDHCDKEFETSCQLGSHKKVAHDQ 496
>SB_27848| Best HMM Match : zf-C2H2 (HMM E-Value=1.49995e-41)
Length = 257
Score = 28.7 bits (61), Expect = 2.1
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +1
Query: 205 LIQHQKAKHFKCHICHKKLYTGPGLSIHCMQVHKE 309
+I H K F+C++C K LS H M +H +
Sbjct: 138 MIVHSNRKPFQCNVCEKAFKRSSTLSTH-MLIHSD 171
>SB_57| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1498
Score = 28.7 bits (61), Expect = 2.1
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
Frame = +1
Query: 187 FDDEKILIQHQKA----KHFKCHICHKKLYTGPGLSIHCMQVHKEA 312
F L++HQ++ + F C +C K L T L H M HK++
Sbjct: 1185 FSTHVYLVEHQESVLGEREFTCEVCDKSLLTRAHLKRHTMN-HKKS 1229
>SB_13281| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 477
Score = 28.3 bits (60), Expect = 2.8
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +1
Query: 217 QKAKHFKCHICHKKLYTGPGLSIHCMQVHKE 309
Q + F CH+C++ L IH + VH++
Sbjct: 331 QGDRKFPCHLCNRSFEKRDRLRIHILHVHEK 361
>SB_56660| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 917
Score = 27.9 bits (59), Expect = 3.7
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 205 LIQHQKAKHFKCHICHKKLYTGPGLSIHCMQVH 303
L+ H K FKC +C K GL H +++H
Sbjct: 469 LMMHSGQKPFKCDVCDKGFTRHAGLKSH-LRIH 500
>SB_28794| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 167
Score = 27.9 bits (59), Expect = 3.7
Identities = 8/46 (17%), Positives = 23/46 (50%)
Frame = -1
Query: 420 FLFLMFFHIFRGYTFHSINFYFYI*PIWQ*IWYFVYGFFMYLHAVY 283
+ + +++ + Y +H +Y+Y + +Y+ Y ++ Y + Y
Sbjct: 116 YYYYYYYYYYYYYYYHHYYYYYYYYYYYYYYYYYYYYYYYYYYYYY 161
>SB_16305| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1122
Score = 27.9 bits (59), Expect = 3.7
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +1
Query: 199 KILIQHQKAKHFKCHICHKKLYTGPGLSIHCMQVHKEAIDKVPNSLPNRSNIE 357
K + H+ K ++C C K LSIH + HKE VP P+RS+++
Sbjct: 917 KHMRSHKDFKPYRCDKCDKSFNQSRLLSIHSL-THKEK-KTVPK--PSRSSVD 965
>SB_23259| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1449
Score = 27.9 bits (59), Expect = 3.7
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +1
Query: 202 ILIQHQKAKHFKCHICHKKLYTGPGLSIH 288
+ + H + F+C ICHK + L+ H
Sbjct: 989 VRVHHTHERPFQCQICHKSFHMAGDLTKH 1017
>SB_51905| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 928
Score = 27.5 bits (58), Expect = 4.8
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +1
Query: 214 HQKAKHFKCHICHKKLYTGPGLSIHCMQVH 303
H AK FKC C K + L+ H VH
Sbjct: 866 HSGAKPFKCDTCEKAFRSSSELTRHVKLVH 895
>SB_46179| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4856
Score = 27.5 bits (58), Expect = 4.8
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +1
Query: 307 EAIDKVPNSLPNRSNIEIEIYGMEGIPPEDVKEHEKQKS 423
EA+D+ S+ R ++E ++ G E PP +EHE S
Sbjct: 4771 EALDEQIKSVFRRPSME-DLLGAEDFPPPPTEEHETTDS 4808
>SB_37930| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 707
Score = 27.5 bits (58), Expect = 4.8
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +1
Query: 190 DDEKILIQHQKAKHFKCHICHKKLYTGPGLSIHCMQVH 303
D + ++ H K K F C C+K T L +H ++VH
Sbjct: 115 DLRRHMLTHTKEKPFACSTCNKAFATKQTLIVH-IRVH 151
>SB_21010| Best HMM Match : PHD (HMM E-Value=7e-10)
Length = 389
Score = 27.5 bits (58), Expect = 4.8
Identities = 15/74 (20%), Positives = 30/74 (40%), Gaps = 2/74 (2%)
Frame = +1
Query: 145 RRHPNLGAGIVTGQFDDEKI--LIQHQKAKHFKCHICHKKLYTGPGLSIHCMQVHKEAID 318
R P ++ E++ + + K + C IC ++ GPGL H + + D
Sbjct: 170 RPSPLFSGSMIVRNITKEELARMTPEDRKKPYVCEICGRRYKNGPGLKYHYTHYNHDQ-D 228
Query: 319 KVPNSLPNRSNIEI 360
N+ + +I +
Sbjct: 229 NTSNAAQDDHSISL 242
>SB_32609| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1741
Score = 27.5 bits (58), Expect = 4.8
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +1
Query: 226 KHFKCHICHKKLYTGPGLSIH 288
K FKC IC K+ T GL+ H
Sbjct: 1303 KLFKCDICEKEFKTHVGLNFH 1323
>SB_20696| Best HMM Match : Gam (HMM E-Value=2.1)
Length = 252
Score = 27.5 bits (58), Expect = 4.8
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +1
Query: 280 SIHCMQVHKEAIDKVPNSLPNRSNIEIEIYGMEGIPPEDVK 402
S+H Q+ I+ + + + N+S E I M G+PPED K
Sbjct: 94 SVHVTQLGTN-IEHIASCVQNKSTAE-RIRRMRGLPPEDSK 132
>SB_11362| Best HMM Match : zf-C2H2 (HMM E-Value=7.9e-32)
Length = 382
Score = 27.5 bits (58), Expect = 4.8
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +1
Query: 199 KILIQHQKAKHFKCHICHKKLYTGPGLSIHCMQVHK 306
KI + + ++CH+C + G GL+ H HK
Sbjct: 324 KITHEGGELAKYECHLCGARYTRGTGLTSHLKAKHK 359
>SB_43| Best HMM Match : Motile_Sperm (HMM E-Value=0.61)
Length = 662
Score = 27.5 bits (58), Expect = 4.8
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +1
Query: 334 LPNRSNIEIEIYGMEGIPPEDVKEHEKQK 420
LP+ + EI + GM PP + EH +QK
Sbjct: 120 LPHGPDYEIPLRGMVAQPPAPIDEHIQQK 148
>SB_32644| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 365
Score = 27.1 bits (57), Expect = 6.4
Identities = 11/38 (28%), Positives = 18/38 (47%)
Frame = +1
Query: 190 DDEKILIQHQKAKHFKCHICHKKLYTGPGLSIHCMQVH 303
D +K+ ++ + F C C K T GL +H + H
Sbjct: 182 DRKKLKLESESQDTFDCMSCKKVFSTPHGLEVHVRRSH 219
>SB_14666| Best HMM Match : NHL (HMM E-Value=4.5)
Length = 151
Score = 27.1 bits (57), Expect = 6.4
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +2
Query: 215 IRKRSILNVTFVTKSCTQDLDCPYTACRYIKKP*TKY 325
IR+ +++++TF + S +L P+ CR K P T Y
Sbjct: 27 IRQVTVVDLTFTSDSEECNLKSPFGICRSHKDPYTLY 63
>SB_1799| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 907
Score = 27.1 bits (57), Expect = 6.4
Identities = 9/32 (28%), Positives = 14/32 (43%)
Frame = +1
Query: 214 HQKAKHFKCHICHKKLYTGPGLSIHCMQVHKE 309
H + F+C +C K L HC + H +
Sbjct: 258 HTNERLFQCDLCEKAFIDRADLRRHCQRTHSD 289
>SB_1728| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 935
Score = 27.1 bits (57), Expect = 6.4
Identities = 19/73 (26%), Positives = 32/73 (43%)
Frame = +1
Query: 202 ILIQHQKAKHFKCHICHKKLYTGPGLSIHCMQVHKEAIDKVPNSLPNRSNIEIEIYGMEG 381
++ Q K FKC +C K T L H +++H K S+ R N + + E
Sbjct: 797 VIHQGNKRFKFKCDVCDKMFRTRSHLRDH-VRIHTGQSTKPMRSI-FRCNYCFKTFSKEE 854
Query: 382 IPPEDVKEHEKQK 420
+EH++Q+
Sbjct: 855 SYRSHCEEHKQQR 867
>SB_46756| Best HMM Match : zf-C2H2 (HMM E-Value=4.60046e-42)
Length = 1078
Score = 27.1 bits (57), Expect = 6.4
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +1
Query: 205 LIQHQKAKHFKCHICH 252
+++H K F+CHICH
Sbjct: 361 VLKHPNYKAFECHICH 376
>SB_40339| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 251
Score = 27.1 bits (57), Expect = 6.4
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 6/45 (13%)
Frame = +2
Query: 209 SNIRKRSILNVTFVTKSCTQDLDC---PYTACRYI---KKP*TKY 325
SN+ R+I V+ + KSCT + C P T RY+ K P T Y
Sbjct: 3 SNLAGRTIEEVSEIIKSCTDRVICTVKPSTDFRYVDTHKTPDTDY 47
>SB_37978| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 487
Score = 27.1 bits (57), Expect = 6.4
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +1
Query: 211 QHQKAKHFKCHICHKKLYTGPGLSIHCMQVHK 306
Q++K K FKC C K L H M +HK
Sbjct: 284 QNEKLKKFKCPTCDKAFIRNYTLQCH-MLIHK 314
>SB_34111| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 757
Score = 27.1 bits (57), Expect = 6.4
Identities = 10/35 (28%), Positives = 19/35 (54%)
Frame = +1
Query: 205 LIQHQKAKHFKCHICHKKLYTGPGLSIHCMQVHKE 309
+++H K F C +C ++ L++H +VH E
Sbjct: 545 MMRHDGVKPFSCPLCTQRFVNQSALNVH-QKVHSE 578
>SB_8757| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 539
Score = 27.1 bits (57), Expect = 6.4
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = +1
Query: 211 QHQKAKHFKCHICHKKLYTGPGLSIH 288
+H KHFKC C+K+ + H
Sbjct: 262 RHSNEKHFKCSYCNKRFVESGDMRKH 287
>SB_43276| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 426
Score = 26.6 bits (56), Expect = 8.5
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +1
Query: 205 LIQHQKAKHFKCHICHKKLYTGPGLSIHCMQVH 303
L+ H K +KC +C K GL H +++H
Sbjct: 282 LMMHSGQKPYKCDVCDKGFTRHAGLKSH-LRIH 313
>SB_32903| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 765
Score = 26.6 bits (56), Expect = 8.5
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = +1
Query: 214 HQKAKHFKCHICHKKLYTGPGLSIHCMQVH 303
H + ++F C IC+K + L H VH
Sbjct: 410 HVEERNFPCEICNKAYTSDANLKAHKRSVH 439
>SB_19824| Best HMM Match : zf-C2H2 (HMM E-Value=1.4e-26)
Length = 550
Score = 26.6 bits (56), Expect = 8.5
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = +1
Query: 214 HQKAKHFKCHICHKKLYTGPGLSIHCMQVHKEAIDK-VPNSLPNRSNIEIE 363
H K F C C+KK LS H ++ H +K P S+ + I I+
Sbjct: 410 HTGEKRFTCPECNKKFMRSDHLSKH-VKTHSNGKNKTAPTSVKTQDPIPIQ 459
>SB_3588| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 391
Score = 26.6 bits (56), Expect = 8.5
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +1
Query: 205 LIQHQKAKHFKCHICHKKLYTGPGLSIHCMQVH 303
L+ H K +KC +C K GL H +++H
Sbjct: 247 LMMHSGQKPYKCDVCDKGFTRHAGLKSH-LRIH 278
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,856,919
Number of Sequences: 59808
Number of extensions: 220898
Number of successful extensions: 839
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 623
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 830
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 801830705
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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