Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0433
(423 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical pr... 131 2e-31
Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical pr... 131 2e-31
Z81529-12|CAB04303.1| 492|Caenorhabditis elegans Hypothetical p... 31 0.34
AL023816-5|CAA19434.1| 492|Caenorhabditis elegans Hypothetical ... 31 0.34
AL132904-23|CAC35839.2| 312|Caenorhabditis elegans Hypothetical... 30 0.59
AL132904-7|CAC35838.1| 430|Caenorhabditis elegans Hypothetical ... 30 0.59
AF043706-1|AAB97603.3| 1623|Caenorhabditis elegans Hypothetical ... 30 0.59
AL132951-7|CAD89753.2| 608|Caenorhabditis elegans Hypothetical ... 30 0.79
U39997-9|AAA81101.2| 468|Caenorhabditis elegans Hypothetical pr... 29 1.0
AF016423-8|AAB65319.1| 409|Caenorhabditis elegans Hypothetical ... 29 1.4
Z71260-1|CAA95798.1| 744|Caenorhabditis elegans Hypothetical pr... 28 2.4
U60113-1|AAB03334.1| 715|Caenorhabditis elegans SEM-4 short for... 28 2.4
U60112-1|AAB03333.1| 744|Caenorhabditis elegans SEM-4 long form... 28 2.4
U41542-13|ABO16442.1| 390|Caenorhabditis elegans Hsn abnormal m... 28 3.2
U41542-12|ABO16443.1| 392|Caenorhabditis elegans Hsn abnormal m... 28 3.2
U58760-8|AAY55858.2| 216|Caenorhabditis elegans Hypothetical pr... 27 4.2
U41542-2|AAR30212.1| 623|Caenorhabditis elegans Suppressor of p... 27 4.2
U41542-1|AAR30211.1| 684|Caenorhabditis elegans Suppressor of p... 27 4.2
U39646-6|AAK72058.1| 624|Caenorhabditis elegans Hypothetical pr... 27 4.2
AL031635-9|CAH04762.1| 1136|Caenorhabditis elegans Hypothetical ... 27 4.2
AL021483-7|CAA16344.3| 218|Caenorhabditis elegans Hypothetical ... 27 4.2
AF125447-2|AAD12808.1| 250|Caenorhabditis elegans Hypothetical ... 27 5.5
AC006614-2|AAF39763.1| 254|Caenorhabditis elegans Drosophila od... 27 7.3
Z69664-8|CAN86924.1| 1287|Caenorhabditis elegans Hypothetical pr... 26 9.7
Z69664-7|CAA93515.2| 1338|Caenorhabditis elegans Hypothetical pr... 26 9.7
Z22174-4|CAA80129.2| 361|Caenorhabditis elegans Hypothetical pr... 26 9.7
AF039710-10|AAB96693.2| 393|Caenorhabditis elegans Hypothetical... 26 9.7
>Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical
protein B0035.1b protein.
Length = 341
Score = 131 bits (316), Expect = 2e-31
Identities = 54/68 (79%), Positives = 62/68 (91%)
Frame = +1
Query: 184 QFDDEKILIQHQKAKHFKCHICHKKLYTGPGLSIHCMQVHKEAIDKVPNSLPNRSNIEIE 363
+FDDEKILIQHQKAKHFKCHICHKKL++GPGLSIHCMQVHKE IDK+P ++ R NI +E
Sbjct: 19 EFDDEKILIQHQKAKHFKCHICHKKLFSGPGLSIHCMQVHKETIDKIPAAVHGRDNIHVE 78
Query: 364 IYGMEGIP 387
IYGM+GIP
Sbjct: 79 IYGMQGIP 86
Score = 46.8 bits (106), Expect = 6e-06
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = +3
Query: 129 MGRKKKKASKPWCWYCNR 182
MGRKKKK KPWCWYCNR
Sbjct: 1 MGRKKKKVDKPWCWYCNR 18
>Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical
protein B0035.1a protein.
Length = 298
Score = 131 bits (316), Expect = 2e-31
Identities = 54/68 (79%), Positives = 62/68 (91%)
Frame = +1
Query: 184 QFDDEKILIQHQKAKHFKCHICHKKLYTGPGLSIHCMQVHKEAIDKVPNSLPNRSNIEIE 363
+FDDEKILIQHQKAKHFKCHICHKKL++GPGLSIHCMQVHKE IDK+P ++ R NI +E
Sbjct: 19 EFDDEKILIQHQKAKHFKCHICHKKLFSGPGLSIHCMQVHKETIDKIPAAVHGRDNIHVE 78
Query: 364 IYGMEGIP 387
IYGM+GIP
Sbjct: 79 IYGMQGIP 86
Score = 46.8 bits (106), Expect = 6e-06
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = +3
Query: 129 MGRKKKKASKPWCWYCNR 182
MGRKKKK KPWCWYCNR
Sbjct: 1 MGRKKKKVDKPWCWYCNR 18
>Z81529-12|CAB04303.1| 492|Caenorhabditis elegans Hypothetical
protein T05G11.1 protein.
Length = 492
Score = 31.1 bits (67), Expect = 0.34
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +1
Query: 142 RRRHPNLGAGIVTGQFDDEKILIQHQKAKHFKCHIC 249
R L GI F D++ L +H++ +H CH+C
Sbjct: 6 RNLDDKLLCGICGKYFSDDESLREHRRQRHMTCHMC 41
>AL023816-5|CAA19434.1| 492|Caenorhabditis elegans Hypothetical
protein T05G11.1 protein.
Length = 492
Score = 31.1 bits (67), Expect = 0.34
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +1
Query: 142 RRRHPNLGAGIVTGQFDDEKILIQHQKAKHFKCHIC 249
R L GI F D++ L +H++ +H CH+C
Sbjct: 6 RNLDDKLLCGICGKYFSDDESLREHRRQRHMTCHMC 41
>AL132904-23|CAC35839.2| 312|Caenorhabditis elegans Hypothetical
protein Y111B2A.10b protein.
Length = 312
Score = 30.3 bits (65), Expect = 0.59
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +1
Query: 214 HQKAKHFKCHICHKKLYTGPGLSIHCMQVHKEAIDKVPNSL 336
H ++ F+C ICHK L H +VH++ K ++L
Sbjct: 262 HSQSNRFECTICHKSYPVPSELRKHIKRVHEKDAPKSRSAL 302
Score = 27.5 bits (58), Expect = 4.2
Identities = 12/37 (32%), Positives = 16/37 (43%)
Frame = +1
Query: 193 DEKILIQHQKAKHFKCHICHKKLYTGPGLSIHCMQVH 303
++ +L H F C +C K L IH QVH
Sbjct: 15 EDSLLKPHTAGSIFTCVMCSKAFPNAEALQIHTDQVH 51
>AL132904-7|CAC35838.1| 430|Caenorhabditis elegans Hypothetical
protein Y111B2A.10a protein.
Length = 430
Score = 30.3 bits (65), Expect = 0.59
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +1
Query: 214 HQKAKHFKCHICHKKLYTGPGLSIHCMQVHKEAIDKVPNSL 336
H ++ F+C ICHK L H +VH++ K ++L
Sbjct: 380 HSQSNRFECTICHKSYPVPSELRKHIKRVHEKDAPKSRSAL 420
Score = 27.5 bits (58), Expect = 4.2
Identities = 12/37 (32%), Positives = 16/37 (43%)
Frame = +1
Query: 193 DEKILIQHQKAKHFKCHICHKKLYTGPGLSIHCMQVH 303
++ +L H F C +C K L IH QVH
Sbjct: 133 EDSLLKPHTAGSIFTCVMCSKAFPNAEALQIHTDQVH 169
>AF043706-1|AAB97603.3| 1623|Caenorhabditis elegans Hypothetical
protein ZC123.3 protein.
Length = 1623
Score = 30.3 bits (65), Expect = 0.59
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +1
Query: 226 KHFKCHICHKKLYTGPGLSIHCM-QVHKEAIDKVPNSLPNRSN 351
K ++C +C T LSIH H A+ ++PNS+ +N
Sbjct: 155 KPYRCDLCRYSTTTKGNLSIHMQSDKHLHAVQELPNSIEFAAN 197
>AL132951-7|CAD89753.2| 608|Caenorhabditis elegans Hypothetical
protein Y67H2A.10 protein.
Length = 608
Score = 29.9 bits (64), Expect = 0.79
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 232 FKCHICHKKLYTGPGLSIHCMQVHKEAID 318
+KC C K+ T GLS H M H++ D
Sbjct: 271 YKCTYCSKRYKTSSGLSNHMMSSHQKISD 299
>U39997-9|AAA81101.2| 468|Caenorhabditis elegans Hypothetical
protein F56D1.1 protein.
Length = 468
Score = 29.5 bits (63), Expect = 1.0
Identities = 9/34 (26%), Positives = 18/34 (52%)
Frame = +1
Query: 214 HQKAKHFKCHICHKKLYTGPGLSIHCMQVHKEAI 315
H K + CH C++K + ++H + H+ +I
Sbjct: 423 HDGIKPYSCHTCNQKFHARDRFAVHLSKYHQTSI 456
>AF016423-8|AAB65319.1| 409|Caenorhabditis elegans Hypothetical
protein F40A3.7 protein.
Length = 409
Score = 29.1 bits (62), Expect = 1.4
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -1
Query: 420 FLFLMFFHIFRGYTFHSINFYF 355
FLFL+F +I Y+F + N+YF
Sbjct: 72 FLFLLFPNILANYSFFTFNWYF 93
>Z71260-1|CAA95798.1| 744|Caenorhabditis elegans Hypothetical
protein F15C11.1 protein.
Length = 744
Score = 28.3 bits (60), Expect = 2.4
Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Frame = +1
Query: 214 HQKAKHFKCHICHKKLYTGPGLSIHCMQVH--KEAIDKVPNSLP 339
H + FKC IC + T L H M VH K + +P SLP
Sbjct: 327 HTGERPFKCKICQRAFTTKGNLKTH-MGVHRSKHSFRGLPISLP 369
>U60113-1|AAB03334.1| 715|Caenorhabditis elegans SEM-4 short form
protein.
Length = 715
Score = 28.3 bits (60), Expect = 2.4
Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Frame = +1
Query: 214 HQKAKHFKCHICHKKLYTGPGLSIHCMQVH--KEAIDKVPNSLP 339
H + FKC IC + T L H M VH K + +P SLP
Sbjct: 298 HTGERPFKCKICQRAFTTKGNLKTH-MGVHRSKHSFRGLPISLP 340
>U60112-1|AAB03333.1| 744|Caenorhabditis elegans SEM-4 long form
protein.
Length = 744
Score = 28.3 bits (60), Expect = 2.4
Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Frame = +1
Query: 214 HQKAKHFKCHICHKKLYTGPGLSIHCMQVH--KEAIDKVPNSLP 339
H + FKC IC + T L H M VH K + +P SLP
Sbjct: 327 HTGERPFKCKICQRAFTTKGNLKTH-MGVHRSKHSFRGLPISLP 369
>U41542-13|ABO16442.1| 390|Caenorhabditis elegans Hsn abnormal
migration protein2, isoform a protein.
Length = 390
Score = 27.9 bits (59), Expect = 3.2
Identities = 15/53 (28%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
Frame = +1
Query: 232 FKCHICHKKLYTGPGLSIHCMQVHKEA--IDKVPNSLPNRSNIEIEIYGMEGI 384
F C IC K LS H MQ H ++ N +P+ + +Y + I
Sbjct: 16 FPCSICQKVFCHSSSLSRHRMQAHFKSYTCTTCNNEIPSNDTLRSHMYRVHNI 68
>U41542-12|ABO16443.1| 392|Caenorhabditis elegans Hsn abnormal
migration protein2, isoform b protein.
Length = 392
Score = 27.9 bits (59), Expect = 3.2
Identities = 15/53 (28%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
Frame = +1
Query: 232 FKCHICHKKLYTGPGLSIHCMQVHKEA--IDKVPNSLPNRSNIEIEIYGMEGI 384
F C IC K LS H MQ H ++ N +P+ + +Y + I
Sbjct: 16 FPCSICQKVFCHSSSLSRHRMQAHFKSYTCTTCNNEIPSNDTLRSHMYRVHNI 68
>U58760-8|AAY55858.2| 216|Caenorhabditis elegans Hypothetical
protein C27A2.7 protein.
Length = 216
Score = 27.5 bits (58), Expect = 4.2
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +1
Query: 217 QKAKHFKCHICHKKLYTGPGLSIHCMQVHKEAIDKVP 327
Q + +KC CH + GL H VH + + K P
Sbjct: 125 QDQRVWKCVYCHTQFGRRGGLRRHVQMVHMQMMHKCP 161
>U41542-2|AAR30212.1| 623|Caenorhabditis elegans Suppressor of
presenilin defectprotein 3, isoform b protein.
Length = 623
Score = 27.5 bits (58), Expect = 4.2
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +1
Query: 232 FKCHICHKKLYTGPGLSIH 288
+KCH+C + Y G GL+ H
Sbjct: 21 YKCHLCGQCFYRGCGLASH 39
>U41542-1|AAR30211.1| 684|Caenorhabditis elegans Suppressor of
presenilin defectprotein 3, isoform a protein.
Length = 684
Score = 27.5 bits (58), Expect = 4.2
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +1
Query: 232 FKCHICHKKLYTGPGLSIH 288
+KCH+C + Y G GL+ H
Sbjct: 21 YKCHLCGQCFYRGCGLASH 39
>U39646-6|AAK72058.1| 624|Caenorhabditis elegans Hypothetical
protein F47B7.2c protein.
Length = 624
Score = 27.5 bits (58), Expect = 4.2
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
Frame = +1
Query: 262 YTGPGLSIHCMQVHK-EAIDKVPNSL---PNRSNIEIEIYGMEGIP 387
+ P +H +V + EA DKV N L P R+ +I+ YG+ G+P
Sbjct: 577 HLNPKFQVHAGKVDQLEANDKVKNVLDASPQRTWKDIDGYGVLGVP 622
>AL031635-9|CAH04762.1| 1136|Caenorhabditis elegans Hypothetical
protein Y47D3B.5b protein.
Length = 1136
Score = 27.5 bits (58), Expect = 4.2
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +1
Query: 148 RHPNLGAGIVTGQFDDEKILIQHQKAKH 231
RHP+L GI G+ D +IQH+K H
Sbjct: 1088 RHPSLPTGISRGKVSD--YVIQHEKGIH 1113
>AL021483-7|CAA16344.3| 218|Caenorhabditis elegans Hypothetical
protein Y38H8A.5 protein.
Length = 218
Score = 27.5 bits (58), Expect = 4.2
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = +1
Query: 205 LIQHQKAKHFKCHICHKKLYTGPGLSIHCMQVH 303
+ H++ K F CH+C K L H ++H
Sbjct: 183 MFTHEEHKPFTCHVCSKGFCRNFDLKKHLRKMH 215
Score = 27.1 bits (57), Expect = 5.5
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +1
Query: 208 IQHQKAKHFKCHICHKKLYTGPGLSIHCMQVHKE 309
+ H+ K F C IC + + L+ H M H+E
Sbjct: 156 LTHEDTKKFSCSICSRAFHQSYNLAFH-MFTHEE 188
>AF125447-2|AAD12808.1| 250|Caenorhabditis elegans Hypothetical
protein Y14H12B.1a protein.
Length = 250
Score = 27.1 bits (57), Expect = 5.5
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 3/41 (7%)
Frame = +1
Query: 220 KAKHFKCHI--C-HKKLYTGPGLSIHCMQVHKEAIDKVPNS 333
K K FKC C H+ YT GL H HK ++P++
Sbjct: 22 KTKQFKCTWDGCDHRVFYTSRGLQWHTSVAHKLDNSEIPST 62
>AC006614-2|AAF39763.1| 254|Caenorhabditis elegans Drosophila
odd-skipped-like protein2 protein.
Length = 254
Score = 26.6 bits (56), Expect = 7.3
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +1
Query: 214 HQKAKHFKCHICHKKLYTGPGLSIH 288
HQK + FKC IC K L +H
Sbjct: 174 HQKDRPFKCEICGKGFCQSRTLLVH 198
>Z69664-8|CAN86924.1| 1287|Caenorhabditis elegans Hypothetical protein
K04D7.5b protein.
Length = 1287
Score = 26.2 bits (55), Expect = 9.7
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +1
Query: 292 MQVHKEAIDKVPNSLPNRSNIEIEIYGMEGIPPEDVKEHEKQK 420
++ KE + N P+R IE M + +D + H+KQK
Sbjct: 1002 LRFKKEVKAGITNLAPSRKRTRIEREAMGSVGLDDEQLHDKQK 1044
>Z69664-7|CAA93515.2| 1338|Caenorhabditis elegans Hypothetical protein
K04D7.5a protein.
Length = 1338
Score = 26.2 bits (55), Expect = 9.7
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +1
Query: 292 MQVHKEAIDKVPNSLPNRSNIEIEIYGMEGIPPEDVKEHEKQK 420
++ KE + N P+R IE M + +D + H+KQK
Sbjct: 1002 LRFKKEVKAGITNLAPSRKRTRIEREAMGSVGLDDEQLHDKQK 1044
>Z22174-4|CAA80129.2| 361|Caenorhabditis elegans Hypothetical
protein K01B6.2 protein.
Length = 361
Score = 26.2 bits (55), Expect = 9.7
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +2
Query: 191 TTKRFSSNIRKRSILNVTFVTKSCT 265
TT R SN +K SIL TF++ S T
Sbjct: 329 TTNRDESNRKKSSILACTFISNSNT 353
>AF039710-10|AAB96693.2| 393|Caenorhabditis elegans Hypothetical
protein C46E10.9 protein.
Length = 393
Score = 26.2 bits (55), Expect = 9.7
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +1
Query: 226 KHFKCHICHKKLYTGPGLSIHCMQVHKEAIDKVPN 330
+ FKC IC K+ P L+ H ++H K N
Sbjct: 208 RQFKCEICEKQFANKPNLNRH-RKIHSGTKSKKCN 241
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,118,594
Number of Sequences: 27780
Number of extensions: 181775
Number of successful extensions: 627
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 561
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 627
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 692685370
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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