Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0431
(340 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_03_0088 + 12327339-12328092,12329474-12329601,12330249-123304... 29 0.70
01_01_0507 - 3704314-3704449,3705038-3705094,3705219-3705297,370... 28 1.6
09_01_0184 + 2693576-2693578,2694157-2694952,2695169-2695249,269... 28 2.1
02_05_1309 + 35627549-35627679,35628377-35629361 27 2.8
02_03_0334 + 17855027-17855029,17855733-17855804,17856040-178561... 27 3.8
12_01_0024 + 178539-179418,179593-179938,180127-180244 27 5.0
10_08_0156 - 15282111-15282752,15284787-15285719 27 5.0
03_06_0768 - 36132733-36133035 26 6.6
02_04_0215 - 20983210-20983293,20983440-20983512,20984072-209841... 26 6.6
12_02_0343 - 17748882-17753396 26 8.7
11_06_0151 - 20643032-20643085,20643202-20643307,20643415-206434... 26 8.7
11_01_0039 - 290960-291086,291615-291714,291809-292013,292466-29... 26 8.7
07_03_0451 + 18340166-18340533,18340576-18341006,18343057-183431... 26 8.7
03_06_0614 - 35099225-35099461,35099545-35099694,35099919-351000... 26 8.7
>01_03_0088 +
12327339-12328092,12329474-12329601,12330249-12330474,
12332638-12332765,12332880-12333033,12333408-12333841
Length = 607
Score = 29.5 bits (63), Expect = 0.70
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = -3
Query: 323 VERXEIQLDIHDASSPAVLILTVDSNHHLLVGEHAVDQGPRHILERHRPLFALRADVA 150
VE + + + S PAVL+ +SN +L E+ D+ LE + F +DVA
Sbjct: 516 VEDFSVTSQVVEHSFPAVLVANDESNPDVLNAEYTEDEPETGTLEPQQHEFTESSDVA 573
>01_01_0507 -
3704314-3704449,3705038-3705094,3705219-3705297,
3705380-3705486,3705833-3705949,3706077-3706165,
3706668-3706721,3706800-3706866,3706971-3707128,
3707318-3707386,3707481-3707618,3707706-3707740,
3707829-3707952
Length = 409
Score = 28.3 bits (60), Expect = 1.6
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = -3
Query: 233 VGEHAVDQGPRHILERHRPLFALRADVALILHIIVFV 123
VG+H P H F L AD AL+ I+VFV
Sbjct: 4 VGKHGESSPPSDRRPLHFAAFLLLADAALVALIVVFV 40
>09_01_0184 +
2693576-2693578,2694157-2694952,2695169-2695249,
2695454-2695793,2695799-2696258,2696404-2696526,
2696532-2697266
Length = 845
Score = 27.9 bits (59), Expect = 2.1
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +3
Query: 147 KGHISPQCEQRPMSLKYMSWT 209
KG S C +P+SLK+ SWT
Sbjct: 812 KGSTSKACATQPVSLKHDSWT 832
>02_05_1309 + 35627549-35627679,35628377-35629361
Length = 371
Score = 27.5 bits (58), Expect = 2.8
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +2
Query: 137 CGG*GPHQPAVRTEADVSQVYVVDPGRQRALRQGGDG 247
CGG G H +R + ++ V PGR+R GG G
Sbjct: 98 CGGGGDHH--LRRGGEAPELAEVSPGRERPEGLGGGG 132
>02_03_0334 +
17855027-17855029,17855733-17855804,17856040-17856124,
17856129-17856223
Length = 84
Score = 27.1 bits (57), Expect = 3.8
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1
Query: 145 IRATSARSANRGRCLSSICRGPWS 216
+R + S NRG C + IC PW+
Sbjct: 29 LRVNNYDSINRGCCCNVICNCPWT 52
>12_01_0024 + 178539-179418,179593-179938,180127-180244
Length = 447
Score = 26.6 bits (56), Expect = 5.0
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Frame = +2
Query: 185 VSQVYVVDPGRQRALRQGGDGSSPRSI*AQLASWRRGC---QVGSHXVLRLR 331
V+ + +D R+ L +G + SS R LASW R C + G V+ LR
Sbjct: 203 VTVIKAIDTARKNCLWRGNNPSSTRK---SLASWDRVCMPKEKGGLGVINLR 251
>10_08_0156 - 15282111-15282752,15284787-15285719
Length = 524
Score = 26.6 bits (56), Expect = 5.0
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = -3
Query: 257 VDSNHHLLVGEHAVDQGPRHILERHRPLFALRADVALILHIIV 129
+ S HHL VG HA+ + R + E+H ++ + + ++V
Sbjct: 46 IGSLHHL-VGSHAIHRSMRALAEKHGRHHLMQISLGEVFAVVV 87
>03_06_0768 - 36132733-36133035
Length = 100
Score = 26.2 bits (55), Expect = 6.6
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +1
Query: 139 WRIRATSARSANRGRCLSSICRGPWSTAC 225
W + AT+AR R CL+ C+G W+ C
Sbjct: 19 WALLATAARGNCRDECLAG-CQG-WAIIC 45
>02_04_0215 -
20983210-20983293,20983440-20983512,20984072-20984159,
20984232-20984388,20984472-20984575,20985045-20985119,
20985144-20985213
Length = 216
Score = 26.2 bits (55), Expect = 6.6
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +3
Query: 129 YNDVEDKGHISPQCEQRPMSLKYMSWT 209
Y DVED ++ +Q P S KY T
Sbjct: 142 YTDVEDLSYLQRHLDQDPRSAKYRKLT 168
>12_02_0343 - 17748882-17753396
Length = 1504
Score = 25.8 bits (54), Expect = 8.7
Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Frame = +1
Query: 130 TMMWRIRA-TSARSANRGRCLSSICRGPWSTACSP 231
T W A A +GRCLS+ G + CSP
Sbjct: 130 TCKWNADALVPVDDAEQGRCLSATAVGKFLPCCSP 164
>11_06_0151 -
20643032-20643085,20643202-20643307,20643415-20643495,
20643588-20643715,20643829-20643903,20644853-20645374,
20646622-20646687,20647990-20648076,20648173-20648247,
20648705-20648821,20648932-20649015,20649152-20649217,
20649352-20649417,20650079-20650150,20650231-20650332,
20650428-20650605,20650700-20650755,20653159-20653269,
20653354-20653422,20653558-20653741,20653826-20653914,
20654070-20654147,20654509-20654631,20654755-20654874,
20654975-20655055,20655285-20655431,20655533-20655611,
20657114-20657223,20659138-20659236,20659467-20659582,
20659673-20659781,20659839-20660069,20660152-20660417,
20661349-20661506,20661601-20661751,20661897-20661966,
20662203-20662232
Length = 1451
Score = 25.8 bits (54), Expect = 8.7
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Frame = +3
Query: 18 ELNSTMQVKWDRQVPVKFLLSETPKYC-FAIAIDKLYEYNDVEDK 149
++ S ++ +RQV V F L E PK F++ + KL+ Y+DV ++
Sbjct: 795 DVPSYLEYVHNRQV-VHFRLLEKPKDDDFSLELSKLHTYDDVVER 838
>11_01_0039 -
290960-291086,291615-291714,291809-292013,292466-292513,
295071-295646,295828-296260,296470-297338,297433-298227,
298709-298753,299135-299352,300055-300364,302715-302984
Length = 1331
Score = 25.8 bits (54), Expect = 8.7
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 79 PKHQSIASLLP*TSSTNTMMWRIR 150
P S++SLLP S+ N MWR R
Sbjct: 23 PHRLSLSSLLPPLSNHNKEMWRRR 46
>07_03_0451 +
18340166-18340533,18340576-18341006,18343057-18343184,
18343329-18343958,18344761-18345480
Length = 758
Score = 25.8 bits (54), Expect = 8.7
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = -3
Query: 155 VALILHIIVFVELVYGNSEA 96
+A + +I+FV +YGNSEA
Sbjct: 680 IATAVCVIIFVSSLYGNSEA 699
>03_06_0614 -
35099225-35099461,35099545-35099694,35099919-35100066,
35100152-35100231,35100428-35100594,35100692-35100940,
35101025-35102310,35102423-35102544,35102946-35103272
Length = 921
Score = 25.8 bits (54), Expect = 8.7
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = -1
Query: 112 MAIAKQYFGVSDNKNFTGTCLSHFTCIVEFSSVSA 8
M + +Y V+DNK+F C E S SA
Sbjct: 495 MRLPSRYTSVADNKSFKSDASPRLNCDSECESTSA 529
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,275,224
Number of Sequences: 37544
Number of extensions: 181589
Number of successful extensions: 485
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 482
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 485
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 470052804
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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