Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0431
         (340 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g31480.1 68415.m03845 expressed protein contains Pfam profile...    28   1.8  
At5g35750.1 68418.m04281 histidine kinase (AHK2) identical to hi...    27   2.4  
At1g03300.1 68414.m00308 agenet domain-containing protein contai...    27   2.4  
At2g17650.1 68415.m02042 AMP-dependent synthetase and ligase fam...    27   3.2  
At1g64630.1 68414.m07327 protein kinase family protein contains ...    27   4.2  
At4g13410.1 68417.m02094 glycosyl transferase family 2 protein s...    26   7.4  
At1g58310.1 68414.m06633 F-box family protein contains F-box dom...    26   7.4  
At1g17420.1 68414.m02128 lipoxygenase, putative similar to lipox...    26   7.4  
At5g47490.1 68418.m05864 expressed protein                             25   9.7  
At2g34360.1 68415.m04207 MATE efflux family protein similar to r...    25   9.7  

>At2g31480.1 68415.m03845 expressed protein contains Pfam profile
           PF03754: Domain of unknown function (DUF313)
          Length = 472

 Score = 27.9 bits (59), Expect = 1.8
 Identities = 16/54 (29%), Positives = 28/54 (51%)
 Frame = +2

Query: 173 TEADVSQVYVVDPGRQRALRQGGDGSSPRSI*AQLASWRRGCQVGSHXVLRLRG 334
           T  D+ + + + P R+++L     G+SPRS+ AQL + +   + G    L   G
Sbjct: 283 TPEDILKHFSMSPRRKKSLGSKIAGTSPRSMRAQLQTRKLDLKEGCKRKLMFNG 336


>At5g35750.1 68418.m04281 histidine kinase (AHK2) identical to
           histidine kinase AHK2 [Arabidopsis thaliana]
           gi|13537196|dbj|BAB40774
          Length = 1176

 Score = 27.5 bits (58), Expect = 2.4
 Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
 Frame = -3

Query: 182 RPLFALRADVALILHIIVFVELVYGNSEAILWCFGQQK-LHRHLSV 48
           +PLF L    +L++ +++F+ L     E    C G++K L+RH +V
Sbjct: 28  KPLFFLILCGSLVIVLVMFLRLGRSQKEETDSCNGEEKVLYRHQNV 73


>At1g03300.1 68414.m00308 agenet domain-containing protein contains
           Pfam PF05641: Agenet domain
          Length = 670

 Score = 27.5 bits (58), Expect = 2.4
 Identities = 17/62 (27%), Positives = 27/62 (43%)
 Frame = +3

Query: 123 YEYNDVEDKGHISPQCEQRPMSLKYMSWTLVDSVLSDKEVMVRVHGQYKHSWRAGVVDVK 302
           Y    +  +G  SP   ++          L + V+ ++  MV     YKH WR GVV  K
Sbjct: 45  YMTKSLNKEGSSSPPTVEQRFIRPVPPENLYNGVVFEEGTMV--DADYKHRWRTGVVINK 102

Query: 303 LD 308
           ++
Sbjct: 103 ME 104


>At2g17650.1 68415.m02042 AMP-dependent synthetase and ligase family
           protein similar to AMP-binding protein GI:1903034 from
           [Brassica napus]; contains Pfam AMP-binding domain
           PF00501; identical to cDNA adenosine monophosphate
           binding protein 2 AMPBP2 (AMPBP2) GI:20799712
          Length = 603

 Score = 27.1 bits (57), Expect = 3.2
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +3

Query: 90  KYCFAIAIDKLYEYNDVEDKGHISPQCEQRPMSLKYMSWT 209
           KY F    + L +  D E +  I P+CE  P+S+ Y S T
Sbjct: 214 KYSFDYEYETLLKSGDSEFE-IIKPRCEWDPISINYTSGT 252


>At1g64630.1 68414.m07327 protein kinase family protein contains
           eukaryotic protein kinase domain, INTERPRO:IPR000719;
           contains serine/threonine protein kinases active-site
           signature, PROSITE:PS00108
          Length = 524

 Score = 26.6 bits (56), Expect = 4.2
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = +3

Query: 147 KGHISPQCEQRPMSLKYMSWTLVDSVLSDK 236
           K  + PQCE RPM ++Y   T V    S K
Sbjct: 292 KPAMPPQCEYRPMDVEYKKNTSVSICSSAK 321


>At4g13410.1 68417.m02094 glycosyl transferase family 2 protein
           similar to beta-(1-3)-glucosyl transferase GB:AAC62210
           GI:3687658 from [Bradyrhizobium japonicum], cellulose
           synthase from Agrobacterium tumeficiens [gi:710492] and
           Agrobacterium radiobacter [gi:710493]; contains Pfam
           glycosyl transferase, group 2 family protein domain
           PF00535
          Length = 537

 Score = 25.8 bits (54), Expect = 7.4
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -3

Query: 179 PLFALRADVALILHIIVFVELVYGN 105
           PLF     + LI+ ++VFVE VY N
Sbjct: 53  PLFKCIVVMCLIISLLVFVESVYMN 77


>At1g58310.1 68414.m06633 F-box family protein contains F-box domain
           Pfam:PF00646
          Length = 505

 Score = 25.8 bits (54), Expect = 7.4
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +3

Query: 12  LTELNSTMQVKWDRQVPVKFLLSET 86
           +++L   M +KW   +P K  LSET
Sbjct: 131 VSDLELDMHLKWKSSLPSKIFLSET 155


>At1g17420.1 68414.m02128 lipoxygenase, putative similar to
           lipoxygenase gi:1495804 [Solanum tuberosum], gi:1654140
           [Lycopersicon esculentum]
          Length = 919

 Score = 25.8 bits (54), Expect = 7.4
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = +1

Query: 79  PKHQSIASLLP*TSSTNTMMWRIRATSARSANRG 180
           PKH+S   L P   +T+  MW++      S + G
Sbjct: 538 PKHRSKRVLTPPVDATSNWMWQLAKAHVSSNDAG 571


>At5g47490.1 68418.m05864 expressed protein
          Length = 1361

 Score = 25.4 bits (53), Expect = 9.7
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = +2

Query: 161 PAVRTEADVSQVYVVDPGRQRALRQGGDGSSPRSI 265
           PA+   A + Q + VD  +Q ALRQ   GS  R++
Sbjct: 723 PALVIAAQLGQQFYVDTVKQMALRQLVPGSPLRTL 757


>At2g34360.1 68415.m04207 MATE efflux family protein similar to
           ripening regulated protein DDTFR18 [Lycopersicon
           esculentum] GI:12231296; contains Pfam profile PF01554:
           Uncharacterized membrane protein family
          Length = 466

 Score = 25.4 bits (53), Expect = 9.7
 Identities = 16/38 (42%), Positives = 22/38 (57%)
 Frame = -3

Query: 164 RADVALILHIIVFVELVYGNSEAILWCFGQQKLHRHLS 51
           RA + L L + V + +V+ N+E  L  FGQ K   HLS
Sbjct: 111 RAMLVLTL-LSVPLSIVWANTEHFLVFFGQDKSIAHLS 147


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,233,172
Number of Sequences: 28952
Number of extensions: 137695
Number of successful extensions: 395
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 387
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 395
length of database: 12,070,560
effective HSP length: 72
effective length of database: 9,986,016
effective search space used: 399440640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)