Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0430
         (455 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0CXE1 Cluster: Chromosome undetermined scaffold_30, wh...    34   1.7  
UniRef50_UPI0000DA27F3 Cluster: PREDICTED: similar to zinc finge...    33   3.8  
UniRef50_UPI0000DC084B Cluster: UPI0000DC084B related cluster; n...    32   6.7  
UniRef50_A0DRX9 Cluster: Chromosome undetermined scaffold_61, wh...    32   6.7  
UniRef50_Q1ZUY6 Cluster: Putative uncharacterized protein; n=1; ...    31   8.9  

>UniRef50_A0CXE1 Cluster: Chromosome undetermined scaffold_30, whole
           genome shotgun sequence; n=2; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_30,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 562

 Score = 33.9 bits (74), Expect = 1.7
 Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
 Frame = -3

Query: 162 GITMNGYKTFHEHLTTVQQIDICVQNIYKI---VHLLTLNKNSKENHPKTY 19
           G   +GYK  ++H  T QQ    ++ + +    + LL+LNKN+ + + K+Y
Sbjct: 404 GCFCSGYKKQNDHFITRQQFKYYIKELIRFHYELKLLSLNKNNSQKYAKSY 454


>UniRef50_UPI0000DA27F3 Cluster: PREDICTED: similar to zinc finger
           protein 352; n=2; Rattus norvegicus|Rep: PREDICTED:
           similar to zinc finger protein 352 - Rattus norvegicus
          Length = 520

 Score = 32.7 bits (71), Expect = 3.8
 Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
 Frame = -3

Query: 237 SFQVRSPFSSQTSDTTSVRL*SASTGITMNGYKTFHE-HLTTVQQID-ICVQNIYKIVHL 64
           SF  ++PF  Q     +     A   I  NGY+TF+E  ++T  QI  +C QN+ +   +
Sbjct: 207 SFSEQNPFGDQQRSPVADNRFYADQKILPNGYQTFYEPQMSTNYQITCVCGQNVCRCQEI 266

Query: 63  L 61
           L
Sbjct: 267 L 267


>UniRef50_UPI0000DC084B Cluster: UPI0000DC084B related cluster; n=1;
           Rattus norvegicus|Rep: UPI0000DC084B UniRef100 entry -
           Rattus norvegicus
          Length = 342

 Score = 31.9 bits (69), Expect = 6.7
 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
 Frame = -3

Query: 132 HEHLTTVQQI--DICVQNIYKIVHLLTLNKNSKENHPKTYT 16
           H H+  + QI  +IC+ NIY  ++ L  N N+   H  T+T
Sbjct: 28  HVHVYMLLQITYNICIHNIYDTLYKLQCNYNASGTHTHTHT 68


>UniRef50_A0DRX9 Cluster: Chromosome undetermined scaffold_61, whole
           genome shotgun sequence; n=2; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_61,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 927

 Score = 31.9 bits (69), Expect = 6.7
 Identities = 13/37 (35%), Positives = 27/37 (72%)
 Frame = -3

Query: 120 TTVQQIDICVQNIYKIVHLLTLNKNSKENHPKTYTID 10
           T + Q+++ +QN+YKI++ L++N ++ ENH K   ++
Sbjct: 528 TQICQLNL-LQNVYKILYYLSINFHTPENHIKQQILE 563


>UniRef50_Q1ZUY6 Cluster: Putative uncharacterized protein; n=1;
            Vibrio angustum S14|Rep: Putative uncharacterized protein
            - Vibrio angustum S14
          Length = 1138

 Score = 31.5 bits (68), Expect = 8.9
 Identities = 15/52 (28%), Positives = 25/52 (48%)
 Frame = -2

Query: 280  DTLLLKKRVSNQTNVFPSAQSLQLTNKRHHVCAVVVSIHRHHNEWLQNISRT 125
            D +L K RV+ Q  VFP     +   ++++   V     +H  EW+ N+  T
Sbjct: 1085 DIILAKVRVTYQDTVFPLPSLEKAIVEKNNYIPVPAVFSQHQKEWVDNLEDT 1136


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 437,264,639
Number of Sequences: 1657284
Number of extensions: 8410694
Number of successful extensions: 21531
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 20975
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21523
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 23931581955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)