Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0430
         (455 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    29   0.027
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    22   2.4  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    22   3.1  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    21   5.5  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   7.2  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   7.2  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   7.2  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   7.2  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   7.2  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   7.2  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    21   7.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    20   9.5  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     20   9.5  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    20   9.5  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    20   9.5  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    20   9.5  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 28.7 bits (61), Expect = 0.027
 Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 5/47 (10%)
 Frame = +1

Query: 31  MIFFRIFIQSE*MYDFINIL-----NAYVNLLHSCKVFVKCFVTIHC 156
           +I   +F+ +  M+D+  +L     N Y +L H  +VF   F  +HC
Sbjct: 492 LIVRSVFVTTYLMFDYCTVLRVQRFNNYQSLAHYLRVFFTVFNVVHC 538


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 22.2 bits (45), Expect = 2.4
 Identities = 9/27 (33%), Positives = 12/27 (44%)
 Frame = -3

Query: 162 GITMNGYKTFHEHLTTVQQIDICVQNI 82
           G+  N    FH HLT  Q   +  Q +
Sbjct: 263 GMAANKLNVFHWHLTDSQSFPLVSQRV 289


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 21.8 bits (44), Expect = 3.1
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -1

Query: 437 YCTRLVFQYSAV 402
           YCT L++ Y+A+
Sbjct: 54  YCTHLIYGYAAI 65


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = +1

Query: 85  ILNAYVNLLHSCKVFVKC 138
           + N + N+  S K+F++C
Sbjct: 214 VTNGFRNVAESRKIFIEC 231


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 7.2
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +1

Query: 115 SCKVFVKCFVTIHCD 159
           SC+V ++C++ I  D
Sbjct: 146 SCQVVIQCYLEIKID 160



 Score = 20.2 bits (40), Expect = 9.5
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -3

Query: 414 VLRGDHDAX*FTFKCR 367
           ++R DH A  F  +CR
Sbjct: 669 IIRTDHQALKFLSRCR 684


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 20.6 bits (41), Expect = 7.2
 Identities = 10/35 (28%), Positives = 20/35 (57%)
 Frame = -1

Query: 446 VL*YCTRLVFQYSAVITMRXNLLSNVGQVTSGLCS 342
           +L +C  +V+  SA+  +  NL+S+  +    +CS
Sbjct: 332 ILYFCRIMVYLNSAINPILYNLMSSKFRTGFIICS 366


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 7.2
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = +3

Query: 138 FCNHSL*CRWMLTTTAQTWCRLFV 209
           F +H     W+L   +QTW  L +
Sbjct: 458 FISHQHAWIWLLWLLSQTWITLHI 481


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 7.2
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = +3

Query: 138 FCNHSL*CRWMLTTTAQTWCRLFV 209
           F +H     W+L   +QTW  L +
Sbjct: 458 FISHQHAWIWLLWLLSQTWITLHI 481


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 7.2
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = +3

Query: 138 FCNHSL*CRWMLTTTAQTWCRLFV 209
           F +H     W+L   +QTW  L +
Sbjct: 458 FISHQHAWIWLLWLLSQTWITLHI 481


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 7.2
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = +3

Query: 138 FCNHSL*CRWMLTTTAQTWCRLFV 209
           F +H     W+L   +QTW  L +
Sbjct: 458 FISHQHAWIWLLWLLSQTWITLHI 481


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 20.6 bits (41), Expect = 7.2
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +1

Query: 127 FVKCFVTIHCDAGG 168
           +V+C +++HC A G
Sbjct: 326 WVRCVLSLHCAAVG 339


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 5/21 (23%), Positives = 13/21 (61%)
 Frame = -1

Query: 434 CTRLVFQYSAVITMRXNLLSN 372
           CT +++ ++ +     N++SN
Sbjct: 204 CTHVIYAFATIDPHNFNMISN 224



 Score = 20.2 bits (40), Expect = 9.5
 Identities = 5/7 (71%), Positives = 6/7 (85%)
 Frame = -1

Query: 185  CGCSQHP 165
            CGC +HP
Sbjct: 2672 CGCGKHP 2678


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 6/16 (37%), Positives = 9/16 (56%)
 Frame = -2

Query: 151 EWLQNISRTPYNCATN 104
           EW   +S+  Y+C  N
Sbjct: 64  EWYHTLSKACYDCPYN 79


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 6/23 (26%), Positives = 11/23 (47%)
 Frame = +1

Query: 361 TWPTFESKLXRIVITAEYWKTKR 429
           +WP    K  R+ +  + WK  +
Sbjct: 284 SWPQLIEKWSRVEMALDNWKNDK 306


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -3

Query: 99  ICVQNIYKIVH 67
           ICV N++  VH
Sbjct: 101 ICVSNVFDFVH 111


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = +1

Query: 358 VTWPTFESKLXRIVITAEYWKTKRVQY 438
           VT  T+E+ +   ++ AE++K   V+Y
Sbjct: 408 VTIVTYETFVWTQIMGAEFFKLYAVEY 434


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,338
Number of Sequences: 336
Number of extensions: 2382
Number of successful extensions: 18
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10406187
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)