Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0430
         (455 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            26   0.72 
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            26   0.72 
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    25   1.7  
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       24   2.9  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   5.1  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   5.1  
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    23   6.7  

>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 25.8 bits (54), Expect = 0.72
 Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
 Frame = -2

Query: 292  GPLKDTLLLKKRVSNQTNVFPSAQSLQLTNK---RHHVCAVVVSIHRHHNEWLQNIS 131
            G LK   ++K   +  +N  P+   L  ++     HH    V  +HRH  E +Q IS
Sbjct: 1932 GKLKQRGIVKLSSNELSNYLPNDSDLPASSNFILLHHGENSVAPLHRHRVENIQKIS 1988


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 25.8 bits (54), Expect = 0.72
 Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
 Frame = -2

Query: 292  GPLKDTLLLKKRVSNQTNVFPSAQSLQLTNK---RHHVCAVVVSIHRHHNEWLQNIS 131
            G LK   ++K   +  +N  P+   L  ++     HH    V  +HRH  E +Q IS
Sbjct: 1933 GKLKQRGIVKLSSNELSNYLPNDSDLPASSNFILLHHGENSVAPLHRHRVENIQKIS 1989


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1022

 Score = 24.6 bits (51), Expect = 1.7
 Identities = 16/71 (22%), Positives = 34/71 (47%)
 Frame = +2

Query: 164  VDADYNRTDVVSLVCELKGLRTWKDICLVRNSLFQQQCVLQRS*HRSSDRILPTRKTAVP 343
            + AD++  + ++++C  +   TW  +    + + + Q  LQ S   +SDR L  ++ A  
Sbjct: 950  LQADFDVENAINIMCSDEV--TWNRVAEYVHEVMENQYNLQCSYRGNSDRELQNQEAASQ 1007

Query: 344  NISQT*LGLHL 376
              S    G+ +
Sbjct: 1008 ETSPERAGISM 1018


>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 23.8 bits (49), Expect = 2.9
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -2

Query: 166 HRHHNEWLQNISRTPYNCATN 104
           +R   EW + +S+  YNC  N
Sbjct: 304 YRFRLEWYRTLSKACYNCPYN 324


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.0 bits (47), Expect = 5.1
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +1

Query: 211  AEGTAHLERHLFGSKLSFSTTVCPSK 288
            AE T        GSKLSF+ T+ PS+
Sbjct: 1434 AEMTIDTTHTADGSKLSFNITIKPSE 1459


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.0 bits (47), Expect = 5.1
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = -1

Query: 317  VYDRYFCVRTFEGHTVVEKESFEPNK 240
            V DR+  ++   GH + E+E + P++
Sbjct: 2084 VIDRFVRIQQENGHRITEEEYYLPDE 2109


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 22.6 bits (46), Expect = 6.7
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +1

Query: 307 RSYTTNKENCCAEHKPDVTWPT 372
           R  TTN ++C  E +  +T PT
Sbjct: 17  RPTTTNNDDCLQEQRTLLTTPT 38


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 495,088
Number of Sequences: 2352
Number of extensions: 10105
Number of successful extensions: 34
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 39119412
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)