Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0430
(455 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D89013-1|BAA92265.1| 180|Homo sapiens DAN protein. 29 5.7
D28124-1|BAA05671.1| 180|Homo sapiens unknown protein. 29 5.7
BT019423-1|AAV38230.1| 180|Homo sapiens neuroblastoma, suppress... 29 5.7
BC012037-1|AAH12037.1| 180|Homo sapiens neuroblastoma, suppress... 29 5.7
AY049783-1|AAL15440.1| 181|Homo sapiens NBL1 protein. 29 5.7
AL031727-12|CAI19019.1| 181|Homo sapiens neuroblastoma, suppres... 29 5.7
AL031727-11|CAM45837.1| 164|Homo sapiens neuroblastoma, suppres... 29 5.7
AL031727-10|CAM45836.1| 128|Homo sapiens neuroblastoma, suppres... 29 5.7
AL031727-9|CAM45835.1| 117|Homo sapiens neuroblastoma, suppress... 29 5.7
AL031727-8|CAM45834.1| 116|Homo sapiens neuroblastoma, suppress... 29 5.7
AL031727-7|CAM45833.1| 109|Homo sapiens neuroblastoma, suppress... 29 5.7
AL031727-6|CAM45832.1| 128|Homo sapiens neuroblastoma, suppress... 29 5.7
AL031727-5|CAM45831.1| 216|Homo sapiens neuroblastoma, suppress... 29 5.7
Y08421-1|CAA69698.1| 627|Homo sapiens nicotinic acetylcholine r... 29 10.0
X89741-1|CAA61893.1| 627|Homo sapiens neuronal acetylcholine re... 29 10.0
X87629-1|CAA60959.1| 602|Homo sapiens nicotinic acetylcholine r... 29 10.0
U62433-1|AAB40111.1| 627|Homo sapiens nicotinic acetylcholine r... 29 10.0
L35901-1|AAA64743.1| 627|Homo sapiens nicotinic acetylcholine r... 29 10.0
DQ093071-1|AAY88737.1| 627|Homo sapiens cholinergic receptor, n... 29 10.0
BC096293-1|AAH96293.1| 451|Homo sapiens CHRNA4 protein protein. 29 10.0
BC096292-1|AAH96292.1| 451|Homo sapiens CHRNA4 protein protein. 29 10.0
BC096291-1|AAH96291.1| 556|Homo sapiens CHRNA4 protein protein. 29 10.0
BC096290-1|AAH96290.1| 627|Homo sapiens cholinergic receptor, n... 29 10.0
AB209359-1|BAD92596.1| 533|Homo sapiens cholinergic receptor, n... 29 10.0
>D89013-1|BAA92265.1| 180|Homo sapiens DAN protein.
Length = 180
Score = 29.5 bits (63), Expect = 5.7
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Frame = -1
Query: 281 GHTVVEKESFEPNKCLSKC---AVPSAHKQATPRLCGCSQHPPA 159
GH+ E +S + CL +C +VP+ Q+T L C PA
Sbjct: 44 GHSGCEAKSIQNRACLGQCFSYSVPNTFPQSTESLVHCDSCMPA 87
>D28124-1|BAA05671.1| 180|Homo sapiens unknown protein.
Length = 180
Score = 29.5 bits (63), Expect = 5.7
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Frame = -1
Query: 281 GHTVVEKESFEPNKCLSKC---AVPSAHKQATPRLCGCSQHPPA 159
GH+ E +S + CL +C +VP+ Q+T L C PA
Sbjct: 44 GHSGCEAKSIQNRACLGQCFSYSVPNTFPQSTESLVHCDSCMPA 87
>BT019423-1|AAV38230.1| 180|Homo sapiens neuroblastoma, suppression
of tumorigenicity 1 protein.
Length = 180
Score = 29.5 bits (63), Expect = 5.7
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Frame = -1
Query: 281 GHTVVEKESFEPNKCLSKC---AVPSAHKQATPRLCGCSQHPPA 159
GH+ E +S + CL +C +VP+ Q+T L C PA
Sbjct: 44 GHSGCEAKSIQNRACLGQCFSYSVPNTFPQSTESLVHCDSCMPA 87
>BC012037-1|AAH12037.1| 180|Homo sapiens neuroblastoma, suppression
of tumorigenicity 1 protein.
Length = 180
Score = 29.5 bits (63), Expect = 5.7
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Frame = -1
Query: 281 GHTVVEKESFEPNKCLSKC---AVPSAHKQATPRLCGCSQHPPA 159
GH+ E +S + CL +C +VP+ Q+T L C PA
Sbjct: 44 GHSGCEAKSIQNRACLGQCFSYSVPNTFPQSTESLVHCDSCMPA 87
>AY049783-1|AAL15440.1| 181|Homo sapiens NBL1 protein.
Length = 181
Score = 29.5 bits (63), Expect = 5.7
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Frame = -1
Query: 281 GHTVVEKESFEPNKCLSKC---AVPSAHKQATPRLCGCSQHPPA 159
GH+ E +S + CL +C +VP+ Q+T L C PA
Sbjct: 45 GHSGCEAKSIQNRACLGQCFSYSVPNTFPQSTESLVHCDSCMPA 88
>AL031727-12|CAI19019.1| 181|Homo sapiens neuroblastoma,
suppression of tumorigenicity 1 protein.
Length = 181
Score = 29.5 bits (63), Expect = 5.7
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Frame = -1
Query: 281 GHTVVEKESFEPNKCLSKC---AVPSAHKQATPRLCGCSQHPPA 159
GH+ E +S + CL +C +VP+ Q+T L C PA
Sbjct: 45 GHSGCEAKSIQNRACLGQCFSYSVPNTFPQSTESLVHCDSCMPA 88
>AL031727-11|CAM45837.1| 164|Homo sapiens neuroblastoma,
suppression of tumorigenicity 1 protein.
Length = 164
Score = 29.5 bits (63), Expect = 5.7
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Frame = -1
Query: 281 GHTVVEKESFEPNKCLSKC---AVPSAHKQATPRLCGCSQHPPA 159
GH+ E +S + CL +C +VP+ Q+T L C PA
Sbjct: 45 GHSGCEAKSIQNRACLGQCFSYSVPNTFPQSTESLVHCDSCMPA 88
>AL031727-10|CAM45836.1| 128|Homo sapiens neuroblastoma,
suppression of tumorigenicity 1 protein.
Length = 128
Score = 29.5 bits (63), Expect = 5.7
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Frame = -1
Query: 281 GHTVVEKESFEPNKCLSKC---AVPSAHKQATPRLCGCSQHPPA 159
GH+ E +S + CL +C +VP+ Q+T L C PA
Sbjct: 45 GHSGCEAKSIQNRACLGQCFSYSVPNTFPQSTESLVHCDSCMPA 88
>AL031727-9|CAM45835.1| 117|Homo sapiens neuroblastoma, suppression
of tumorigenicity 1 protein.
Length = 117
Score = 29.5 bits (63), Expect = 5.7
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Frame = -1
Query: 281 GHTVVEKESFEPNKCLSKC---AVPSAHKQATPRLCGCSQHPPA 159
GH+ E +S + CL +C +VP+ Q+T L C PA
Sbjct: 45 GHSGCEAKSIQNRACLGQCFSYSVPNTFPQSTESLVHCDSCMPA 88
>AL031727-8|CAM45834.1| 116|Homo sapiens neuroblastoma, suppression
of tumorigenicity 1 protein.
Length = 116
Score = 29.5 bits (63), Expect = 5.7
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Frame = -1
Query: 281 GHTVVEKESFEPNKCLSKC---AVPSAHKQATPRLCGCSQHPPA 159
GH+ E +S + CL +C +VP+ Q+T L C PA
Sbjct: 45 GHSGCEAKSIQNRACLGQCFSYSVPNTFPQSTESLVHCDSCMPA 88
>AL031727-7|CAM45833.1| 109|Homo sapiens neuroblastoma, suppression
of tumorigenicity 1 protein.
Length = 109
Score = 29.5 bits (63), Expect = 5.7
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Frame = -1
Query: 281 GHTVVEKESFEPNKCLSKC---AVPSAHKQATPRLCGCSQHPPA 159
GH+ E +S + CL +C +VP+ Q+T L C PA
Sbjct: 45 GHSGCEAKSIQNRACLGQCFSYSVPNTFPQSTESLVHCDSCMPA 88
>AL031727-6|CAM45832.1| 128|Homo sapiens neuroblastoma, suppression
of tumorigenicity 1 protein.
Length = 128
Score = 29.5 bits (63), Expect = 5.7
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Frame = -1
Query: 281 GHTVVEKESFEPNKCLSKC---AVPSAHKQATPRLCGCSQHPPA 159
GH+ E +S + CL +C +VP+ Q+T L C PA
Sbjct: 79 GHSGCEAKSIQNRACLGQCFSYSVPNTFPQSTESLVHCDSCMPA 122
>AL031727-5|CAM45831.1| 216|Homo sapiens neuroblastoma, suppression
of tumorigenicity 1 protein.
Length = 216
Score = 29.5 bits (63), Expect = 5.7
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Frame = -1
Query: 281 GHTVVEKESFEPNKCLSKC---AVPSAHKQATPRLCGCSQHPPA 159
GH+ E +S + CL +C +VP+ Q+T L C PA
Sbjct: 80 GHSGCEAKSIQNRACLGQCFSYSVPNTFPQSTESLVHCDSCMPA 123
>Y08421-1|CAA69698.1| 627|Homo sapiens nicotinic acetylcholine
receptor alpha4 subunit precursor protein.
Length = 627
Score = 28.7 bits (61), Expect = 10.0
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +1
Query: 310 SYTTNKENCCAEHKPDVTW 366
+Y T K CCAE PD+T+
Sbjct: 217 TYNTRKYECCAEIYPDITY 235
>X89741-1|CAA61893.1| 627|Homo sapiens neuronal acetylcholine
receptor alpha-4 subunit protein.
Length = 627
Score = 28.7 bits (61), Expect = 10.0
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +1
Query: 310 SYTTNKENCCAEHKPDVTW 366
+Y T K CCAE PD+T+
Sbjct: 217 TYNTRKYECCAEIYPDITY 235
>X87629-1|CAA60959.1| 602|Homo sapiens nicotinic acetylcholine
receptor protein.
Length = 602
Score = 28.7 bits (61), Expect = 10.0
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +1
Query: 310 SYTTNKENCCAEHKPDVTW 366
+Y T K CCAE PD+T+
Sbjct: 192 TYNTRKYECCAEIYPDITY 210
>U62433-1|AAB40111.1| 627|Homo sapiens nicotinic acetylcholine
receptor alpha4 subunit precursor protein.
Length = 627
Score = 28.7 bits (61), Expect = 10.0
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +1
Query: 310 SYTTNKENCCAEHKPDVTW 366
+Y T K CCAE PD+T+
Sbjct: 217 TYNTRKYECCAEIYPDITY 235
>L35901-1|AAA64743.1| 627|Homo sapiens nicotinic acetylcholine
receptor alpha 4 subunit protein.
Length = 627
Score = 28.7 bits (61), Expect = 10.0
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +1
Query: 310 SYTTNKENCCAEHKPDVTW 366
+Y T K CCAE PD+T+
Sbjct: 217 TYNTRKYECCAEIYPDITY 235
>DQ093071-1|AAY88737.1| 627|Homo sapiens cholinergic receptor,
nicotinic, alpha polypeptide 4 protein.
Length = 627
Score = 28.7 bits (61), Expect = 10.0
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +1
Query: 310 SYTTNKENCCAEHKPDVTW 366
+Y T K CCAE PD+T+
Sbjct: 217 TYNTRKYECCAEIYPDITY 235
>BC096293-1|AAH96293.1| 451|Homo sapiens CHRNA4 protein protein.
Length = 451
Score = 28.7 bits (61), Expect = 10.0
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +1
Query: 310 SYTTNKENCCAEHKPDVTW 366
+Y T K CCAE PD+T+
Sbjct: 41 TYNTRKYECCAEIYPDITY 59
>BC096292-1|AAH96292.1| 451|Homo sapiens CHRNA4 protein protein.
Length = 451
Score = 28.7 bits (61), Expect = 10.0
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +1
Query: 310 SYTTNKENCCAEHKPDVTW 366
+Y T K CCAE PD+T+
Sbjct: 41 TYNTRKYECCAEIYPDITY 59
>BC096291-1|AAH96291.1| 556|Homo sapiens CHRNA4 protein protein.
Length = 556
Score = 28.7 bits (61), Expect = 10.0
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +1
Query: 310 SYTTNKENCCAEHKPDVTW 366
+Y T K CCAE PD+T+
Sbjct: 146 TYNTRKYECCAEIYPDITY 164
>BC096290-1|AAH96290.1| 627|Homo sapiens cholinergic receptor,
nicotinic, alpha 4 protein.
Length = 627
Score = 28.7 bits (61), Expect = 10.0
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +1
Query: 310 SYTTNKENCCAEHKPDVTW 366
+Y T K CCAE PD+T+
Sbjct: 217 TYNTRKYECCAEIYPDITY 235
>AB209359-1|BAD92596.1| 533|Homo sapiens cholinergic receptor,
nicotinic, alpha polypeptide 4 precursor variant
protein.
Length = 533
Score = 28.7 bits (61), Expect = 10.0
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +1
Query: 310 SYTTNKENCCAEHKPDVTW 366
+Y T K CCAE PD+T+
Sbjct: 123 TYNTRKYECCAEIYPDITY 141
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,098,938
Number of Sequences: 237096
Number of extensions: 1311831
Number of successful extensions: 2872
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 2826
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2872
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3815180866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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