Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0430
         (455 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40060-4|AAY86193.1|  406|Caenorhabditis elegans Hypothetical pr...    31   0.40 
Z82060-3|CAB04883.1|  206|Caenorhabditis elegans Hypothetical pr...    29   1.2  
Z83120-5|CAB05588.1| 1467|Caenorhabditis elegans Hypothetical pr...    27   6.5  
Z69790-3|CAD56579.1| 1234|Caenorhabditis elegans Hypothetical pr...    27   8.6  
Z69790-2|CAA93653.2| 1271|Caenorhabditis elegans Hypothetical pr...    27   8.6  
AF339882-1|AAK14396.1| 1329|Caenorhabditis elegans attractin pro...    27   8.6  

>U40060-4|AAY86193.1|  406|Caenorhabditis elegans Hypothetical
           protein F38B6.8 protein.
          Length = 406

 Score = 31.1 bits (67), Expect = 0.40
 Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
 Frame = -2

Query: 265 KKRVSN-QTNVFPSAQSLQLTNKRHHVCAVVVSIHRHHNEWLQNIS 131
           K  +SN +T +  ++Q+L  T    HV   V+ ++ +HN WLQNI+
Sbjct: 71  KLEISNDETVILHTSQTLFETPVHSHVDTNVLRVY-YHNSWLQNIT 115


>Z82060-3|CAB04883.1|  206|Caenorhabditis elegans Hypothetical
           protein T27F6.4 protein.
          Length = 206

 Score = 29.5 bits (63), Expect = 1.2
 Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
 Frame = -2

Query: 349 YVRHSSFPCW*YTIATSVSG--PLKDTLL-LKKRVSNQTNVFPSAQSLQLTNKRHHVCAV 179
           YV+H        + ++ +SG  P+  TLL LKK+  ++ NV  + +  + T   HH+ +V
Sbjct: 52  YVQHLEIKAKESSQSSVISGGVPVPVTLLELKKKDRSEKNVVTNLKYRKPT-ANHHLDSV 110

Query: 178 VVSI--HRHHNEWLQNISRTP 122
             S   H HH+  L +++R P
Sbjct: 111 HSSSEHHHHHHLSLSSLTRRP 131


>Z83120-5|CAB05588.1| 1467|Caenorhabditis elegans Hypothetical
           protein R06A4.8 protein.
          Length = 1467

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -2

Query: 148 WLQNISRTPYNCATN*HMRSEYL*NRTFTHF 56
           WL     + YNC  + H+R  Y+ +R +  F
Sbjct: 214 WLLEHPESAYNCLNSPHLRPAYVIDRVYHEF 244


>Z69790-3|CAD56579.1| 1234|Caenorhabditis elegans Hypothetical
           protein F33C8.1b protein.
          Length = 1234

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = -1

Query: 278 HTVVEKESFEPNKCLSKCAVPSAHKQATPRLCGCSQ 171
           HT+    +FE  K LS C  P  +     + C CS+
Sbjct: 49  HTLTNHANFEFEKSLSSCDKPCYNGVCLNKACVCSK 84


>Z69790-2|CAA93653.2| 1271|Caenorhabditis elegans Hypothetical
           protein F33C8.1a protein.
          Length = 1271

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = -1

Query: 278 HTVVEKESFEPNKCLSKCAVPSAHKQATPRLCGCSQ 171
           HT+    +FE  K LS C  P  +     + C CS+
Sbjct: 49  HTLTNHANFEFEKSLSSCDKPCYNGVCLNKACVCSK 84


>AF339882-1|AAK14396.1| 1329|Caenorhabditis elegans attractin
           protein.
          Length = 1329

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = -1

Query: 278 HTVVEKESFEPNKCLSKCAVPSAHKQATPRLCGCSQ 171
           HT+    +FE  K LS C  P  +     + C CS+
Sbjct: 49  HTLTNHANFEFEKSLSSCDKPCYNGVCLNKACVCSK 84


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,666,482
Number of Sequences: 27780
Number of extensions: 226089
Number of successful extensions: 583
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 575
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 583
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 809909048
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)