Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0430
         (455 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter...    23   1.6  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    21   6.3  
AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    21   6.3  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    21   6.3  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   6.3  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    21   6.3  
U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor prot...    21   8.4  
AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin pr...    21   8.4  

>AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter
           Am-EAAT protein.
          Length = 543

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 9/33 (27%), Positives = 19/33 (57%)
 Frame = +1

Query: 4   LVINCISFWMIFFRIFIQSE*MYDFINILNAYV 102
           +++ CI+F ++  +   Q + + DF  ILN  +
Sbjct: 243 MIVFCITFGLVAGQFGAQGKLIVDFFMILNEII 275


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 5/10 (50%), Positives = 8/10 (80%)
 Frame = +1

Query: 1   CLVINCISFW 30
           CL + C++FW
Sbjct: 387 CLTVVCLAFW 396


>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +1

Query: 331 NCCAEHKPDVTW 366
           +CC E  PD+T+
Sbjct: 194 SCCPEPYPDITY 205


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +3

Query: 159 CRWMLTTTAQTWCRLFVS*RDC 224
           C+   T TA T C+L+   R C
Sbjct: 174 CKRTATITAATDCQLWAIDRQC 195


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +3

Query: 99  CQFVAQL*GVREMFCNH 149
           C++V    G+ E  CNH
Sbjct: 140 CRYVTTTSGMFEALCNH 156


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 7/19 (36%), Positives = 9/19 (47%)
 Frame = +1

Query: 313 YTTNKENCCAEHKPDVTWP 369
           YTTN+ + C        WP
Sbjct: 127 YTTNESHACLSTGGSCYWP 145


>U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor
           protein.
          Length = 95

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -1

Query: 386 NLLSNVGQVTSGLCSAQQFSL 324
           +LLS  GQV    C+A   SL
Sbjct: 47  DLLSFKGQVNDSACAANCLSL 67


>AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin
           precursor protein.
          Length = 95

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -1

Query: 386 NLLSNVGQVTSGLCSAQQFSL 324
           +LLS  GQV    C+A   SL
Sbjct: 47  DLLSFKGQVNDSACAANCLSL 67


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,180
Number of Sequences: 438
Number of extensions: 2454
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12066642
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)