Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0427
(535 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0578 + 4295386-4296489,4297394-4297507 212 2e-55
03_06_0298 - 32925441-32925998,32926371-32926730,32927161-329272... 212 2e-55
10_02_0199 + 6668902-6669293,6669825-6669882 34 0.083
08_02_1278 - 25838146-25839411 32 0.33
03_05_0366 - 23505755-23506441 31 0.58
03_01_0520 - 3900387-3900613,3900812-3900853,3902092-3902210,390... 30 1.3
03_01_0499 - 3766713-3767159,3767742-3767813,3768004-3768657 30 1.3
06_01_0017 + 189346-189561,189614-189905,190024-190043 29 3.1
04_01_0588 + 7657510-7657992,7658397-7658843 29 3.1
02_04_0457 + 23093020-23093343,23093798-23093806 29 3.1
10_01_0359 + 3956527-3956616,3957623-3957818,3958102-3959418,395... 28 5.4
01_03_0008 + 11594061-11594078,11594201-11594285,11594506-11595149 28 5.4
12_02_0488 + 19587337-19587648,19587739-19587798,19587876-195879... 27 7.2
11_06_0209 + 21282079-21282369,21287029-21287137,21287462-212875... 27 7.2
07_01_0524 + 3892340-3894625,3894995-3895109,3895204-3895298,389... 27 7.2
07_01_0354 + 2578676-2578753,2578871-2578951,2579070-2579312 27 7.2
01_01_0878 + 6888459-6889227,6890498-6890523,6891679-6891843,689... 27 7.2
12_02_0754 - 22817277-22817657,22817796-22817927,22818026-228182... 27 9.5
10_08_1065 - 22640931-22641114,22641213-22641334,22641512-226416... 27 9.5
04_01_0519 + 6831912-6831978,6832333-6832488,6832748-6833098,683... 27 9.5
02_03_0152 - 15767985-15768317 27 9.5
>07_01_0578 + 4295386-4296489,4297394-4297507
Length = 405
Score = 212 bits (517), Expect = 2e-55
Identities = 99/172 (57%), Positives = 118/172 (68%)
Frame = +3
Query: 18 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 197
VF+AP+RPD+V VH +S N RQPY VS+ AGHQTSAESWGTGRAV+RIPRV GGGTHR
Sbjct: 31 VFRAPLRPDVVRFVHRLLSCNKRQPYAVSRRAGHQTSAESWGTGRAVSRIPRVPGGGTHR 90
Query: 198 SGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEK 377
+GQGAFGNMCRGGRMFAPTK WR+WH ARGH IE
Sbjct: 91 AGQGAFGNMCRGGRMFAPTKTWRKWHRRVNVHLRRVAVASALAATSVPSLVLARGHRIET 150
Query: 378 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSXRLRAGKGKMRN 533
+PELPLV++D + I KT QA+ L+++ A++D K S +R GKGKMRN
Sbjct: 151 VPELPLVISDSAESIEKTSQAIKILKQVGAYADAEKAKDSVGIRPGKGKMRN 202
>03_06_0298 -
32925441-32925998,32926371-32926730,32927161-32927230,
32927642-32927797,32929181-32929242,32929339-32929352,
32930421-32930520,32931474-32932574
Length = 806
Score = 212 bits (517), Expect = 2e-55
Identities = 100/175 (57%), Positives = 119/175 (68%)
Frame = +3
Query: 9 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 188
+P V +APIRPD+V H +S N RQPY VS+ AGHQTSAESWGTGRAV+RIPRV GGG
Sbjct: 27 MPQVLRAPIRPDVVTFTHKLLSCNRRQPYAVSRRAGHQTSAESWGTGRAVSRIPRVPGGG 86
Query: 189 THRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHI 368
THR+GQGAFGNMCRGGRMFAPTK WRRWH ARGH
Sbjct: 87 THRAGQGAFGNMCRGGRMFAPTKIWRRWHRRVNIRLRRIAVASALAATAVPSLVLARGHR 146
Query: 369 IEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSXRLRAGKGKMRN 533
IE +PE PLVV+D ++ I KT Q++ L+++ A++D K S +RAGKGKMRN
Sbjct: 147 IEGVPEFPLVVSDSIESIEKTAQSIKVLKQIGAYADAEKTKDSVAIRAGKGKMRN 201
>10_02_0199 + 6668902-6669293,6669825-6669882
Length = 149
Score = 33.9 bits (74), Expect = 0.083
Identities = 17/37 (45%), Positives = 19/37 (51%)
Frame = +3
Query: 129 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGR 239
A+SW TGRA A + R R GG R A N G R
Sbjct: 36 AQSWATGRAAAELGRGRKGGRRRGLAQAAANSGEGNR 72
>08_02_1278 - 25838146-25839411
Length = 421
Score = 31.9 bits (69), Expect = 0.33
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = -3
Query: 458 APQEDDSLFGLVDLLDFVGYNQGKLGNLFNNVSSSL 351
A +E LF L+D+LD V +G+L LF+ S++L
Sbjct: 89 AAREPQRLFRLLDMLDAVARERGRLDELFSGESATL 124
>03_05_0366 - 23505755-23506441
Length = 228
Score = 31.1 bits (67), Expect = 0.58
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +3
Query: 15 FVFKAPIRPDLVNDVHVSMSKNSR-QPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGT 191
++ AP D +V S + R P C S E + +AES TG A R R+ G T
Sbjct: 108 WIHAAPTAADDEKEVARSNAHARRPDPRCPSDEEDEEEAAESGATGLAHTRAGRIHAGPT 167
Query: 192 HRSGQGA 212
+ + + A
Sbjct: 168 NDNDEEA 174
>03_01_0520 -
3900387-3900613,3900812-3900853,3902092-3902210,
3903633-3903712,3903829-3903856,3904151-3904272,
3904714-3904857,3904897-3906327
Length = 730
Score = 29.9 bits (64), Expect = 1.3
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = -2
Query: 234 HHDTCYRRHPDRTYEYHHHGHAEFGRQHVQYPMIQH 127
HH + H + YE+ + H + RQ QY QH
Sbjct: 150 HHQQYQQHHHQQQYEHQNRIHFQHHRQQQQYQQHQH 185
>03_01_0499 - 3766713-3767159,3767742-3767813,3768004-3768657
Length = 390
Score = 29.9 bits (64), Expect = 1.3
Identities = 11/34 (32%), Positives = 14/34 (41%)
Frame = -2
Query: 207 PDRTYEYHHHGHAEFGRQHVQYPMIQHWFGDQPP 106
P + +HHHGH + Q H G PP
Sbjct: 33 PQEHHHHHHHGHHGHHHEQQQQQQHHHHLGPPPP 66
Score = 28.3 bits (60), Expect = 4.1
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = -2
Query: 204 DRTYEYHHHGHAEFGRQHVQYPMIQHWFGDQPP 106
D +HHH H G H Q QH PP
Sbjct: 32 DPQEHHHHHHHGHHGHHHEQQQQQQHHHHLGPP 64
>06_01_0017 + 189346-189561,189614-189905,190024-190043
Length = 175
Score = 28.7 bits (61), Expect = 3.1
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = -3
Query: 371 NNVSSSLNERWDAGSSNGCRQGR--SPLSEVDATVPTP 264
N+ +S L+ +WDAGS + SPLS V A P
Sbjct: 103 NDSTSKLSFKWDAGSCSSASSSAMYSPLSAVSAPAKAP 140
>04_01_0588 + 7657510-7657992,7658397-7658843
Length = 309
Score = 28.7 bits (61), Expect = 3.1
Identities = 18/77 (23%), Positives = 29/77 (37%), Gaps = 3/77 (3%)
Frame = +3
Query: 51 NDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRV---RGGGTHRSGQGAFGN 221
+D+ ++ SR + + ++S+ W G R+ + GGG R G
Sbjct: 201 HDIQWGDNQPSRSSGVLPSSSEWRSSSSRWDLGEITRRMDTLDMQMGGGQQRRPPAEDGL 260
Query: 222 MCRGGRMFAPTKPWRRW 272
P PWRRW
Sbjct: 261 GWASSWFGRPNLPWRRW 277
>02_04_0457 + 23093020-23093343,23093798-23093806
Length = 110
Score = 28.7 bits (61), Expect = 3.1
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = +3
Query: 114 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFG 218
G + S W G A A VRGGG RSG G G
Sbjct: 76 GRRRSQPRWRGGAAAAEAD-VRGGGARRSGGGDEG 109
>10_01_0359 +
3956527-3956616,3957623-3957818,3958102-3959418,
3959482-3960445,3960588-3960648,3961500-3961946
Length = 1024
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -2
Query: 255 SWGRTYVHHDTCYRRHPDRTYEYHH 181
SWGR H D RR P R+ +HH
Sbjct: 303 SWGRD--HADNRLRRSPSRSSNFHH 325
>01_03_0008 + 11594061-11594078,11594201-11594285,11594506-11595149
Length = 248
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = -2
Query: 198 TYEYHH-HGHAEFGRQHVQYPMIQH 127
T+++HH HGH FGR H +P H
Sbjct: 144 THDHHHGHGHHLFGRDH--WPASHH 166
>12_02_0488 +
19587337-19587648,19587739-19587798,19587876-19587941,
19588017-19588082,19588253-19588345
Length = 198
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +3
Query: 24 KAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAES 137
K ++ D N++ + SK R VSK H SAES
Sbjct: 80 KRKVQMDTENELMTNRSKEVRTKMSVSKACKHSVSAES 117
>11_06_0209 +
21282079-21282369,21287029-21287137,21287462-21287580,
21287722-21287829,21287943-21288062,21288838-21289011,
21289111-21289212
Length = 340
Score = 27.5 bits (58), Expect = 7.2
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Frame = +3
Query: 18 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRA---VARIPRVRGGG 188
VF PIR D+V+ V +K + ++ +Q GTGRA R P+ RGG
Sbjct: 160 VFDVPIRKDIVHRVGTHSTKTISEVSGTGRKPYNQK-----GTGRARHGTLRGPQFRGGA 214
Query: 189 T 191
T
Sbjct: 215 T 215
>07_01_0524 +
3892340-3894625,3894995-3895109,3895204-3895298,
3895929-3896167,3896524-3896610,3896967-3897066,
3897908-3898115,3898224-3899422
Length = 1442
Score = 27.5 bits (58), Expect = 7.2
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 6/59 (10%)
Frame = +3
Query: 108 EAGHQTSAESWGTGRAVAR--IPRVRGGGTHRSGQGAFGNMCR---GGRMFAPTKP-WR 266
E G ++ G++V + + R+R H G G+ G++ + GG+M P P WR
Sbjct: 74 EGGGSDKSKGSEVGKSVLQPDVKRIRTEAAHGGGSGSGGSVSKDGTGGKMLRPGFPKWR 132
>07_01_0354 + 2578676-2578753,2578871-2578951,2579070-2579312
Length = 133
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = -3
Query: 170 RNSGDSTSSTP*FSTG--LVTSLLAHAVGLPRVLGHRNVNIIDQV 42
R+SG T F+ L + H +G+ VLG +N+ ++DQ+
Sbjct: 87 RDSGLQTGDPAGFTLADTLACGAVGHIMGVGVVLGLKNIGVLDQI 131
>01_01_0878 +
6888459-6889227,6890498-6890523,6891679-6891843,
6892415-6892494,6893001-6893154,6893808-6893864,
6894103-6894170,6894238-6894344,6894475-6894542,
6894885-6895007
Length = 538
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +2
Query: 248 PHEALAALAPSRQPPTAESGLGGSRCCYR 334
P A A AP+ P A+ G GG C R
Sbjct: 15 PAAAAGAAAPTTPPAAADGGAGGESCSPR 43
>12_02_0754 -
22817277-22817657,22817796-22817927,22818026-22818272,
22818473-22818909
Length = 398
Score = 27.1 bits (57), Expect = 9.5
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -3
Query: 479 DIRPCLEAPQEDDSLFGLVDLLDFVGYNQGKLGNLFNNVS 360
D P L+ + F V+ L V +NQG L N+ NVS
Sbjct: 248 DTTPDLDVVIDFIKCFPCVEKLYIVAFNQGNLKNIRRNVS 287
>10_08_1065 -
22640931-22641114,22641213-22641334,22641512-22641633,
22663988-22664051,22664789-22664878,22665039-22665125,
22665221-22665363,22665400-22665421
Length = 277
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +2
Query: 383 RASLGCSRQSPRDQQDQTGCHLP 451
R SL R+S DQQ GC+LP
Sbjct: 106 RGSLYTDRRSAADQQQAGGCNLP 128
>04_01_0519 +
6831912-6831978,6832333-6832488,6832748-6833098,
6833481-6833662,6833756-6834004,6834182-6834406,
6837492-6837791,6838642-6839215,6839959-6840059
Length = 734
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +3
Query: 369 IEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDIL 482
+ K+PE LV K+Q + K R L A+S++L
Sbjct: 56 VTKVPETKLVANPKIQNVRDLKSLRRLSRSLLAFSNLL 93
>02_03_0152 - 15767985-15768317
Length = 110
Score = 27.1 bits (57), Expect = 9.5
Identities = 16/43 (37%), Positives = 18/43 (41%), Gaps = 5/43 (11%)
Frame = -2
Query: 219 YRRHPDRTYEYHHHGHAEFGRQ----HVQYPMI-QHWFGDQPP 106
YR P HG AEF RQ H +P HW +PP
Sbjct: 19 YRYRPSPMLPELSHGVAEFSRQSTRRHAPWPPSGGHWSSSEPP 61
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,411,504
Number of Sequences: 37544
Number of extensions: 334933
Number of successful extensions: 1375
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1287
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1366
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1190246000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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