Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0426
         (715 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       25   0.81 
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   2.5  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   7.5  
DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory pro...    21   7.5  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   9.9  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   9.9  

>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 24.6 bits (51), Expect = 0.81
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = +1

Query: 523 HFESFYSRDIHNQTQKRNENE 585
           HFES +  ++H++  K NE++
Sbjct: 95  HFESSFGNNLHSEKAKFNESK 115


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 7/18 (38%), Positives = 14/18 (77%)
 Frame = +1

Query: 532 SFYSRDIHNQTQKRNENE 585
           S+Y++D+  Q Q+ N+N+
Sbjct: 475 SYYAKDLEKQRQQCNQNK 492


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 3/28 (10%)
 Frame = +1

Query: 559 QTQKRNENETL---TCKTKKKILNNKYE 633
           + +KR E++      CK  K IL+NK E
Sbjct: 546 EKKKREEDKAKFEGLCKVMKSILDNKVE 573


>DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory
           protein 18 protein.
          Length = 124

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = -3

Query: 464 HHQVKSRQYIWTSLNSKY 411
           HH + ++  +W  L +KY
Sbjct: 86  HHLIDNKPDMWKQLEAKY 103


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +1

Query: 550 IHNQTQKRNENETLTCKTK 606
           + NQT +R +   L C+ K
Sbjct: 803 LRNQTSRRGDPAVLQCEAK 821


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +2

Query: 170 MWNRPRPEQDPL 205
           MWN PR   DP+
Sbjct: 439 MWNIPRENIDPI 450


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,873
Number of Sequences: 336
Number of extensions: 2188
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18947110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)