BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0426
(715 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein. 25 1.8
AY146760-1|AAO12075.1| 313|Anopheles gambiae odorant-binding pr... 23 9.5
AF393487-1|AAL60412.1| 304|Anopheles gambiae odorant binding pr... 23 9.5
>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
Length = 1494
Score = 25.4 bits (53), Expect = 1.8
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +1
Query: 487 GYYVACNPNSFVHFESFYSRDIHNQTQKRNENETLTCKTKKK 612
G Y A NP + +S + + N+NETL+C T ++
Sbjct: 1149 GRYEARNPAYQRTTKDLFSGNQQRTQELVNQNETLSCYTSRR 1190
>AY146760-1|AAO12075.1| 313|Anopheles gambiae odorant-binding
protein AgamOBP31 protein.
Length = 313
Score = 23.0 bits (47), Expect = 9.5
Identities = 9/34 (26%), Positives = 16/34 (47%)
Frame = +1
Query: 514 SFVHFESFYSRDIHNQTQKRNENETLTCKTKKKI 615
S +H FY RD+ + ET C+ + ++
Sbjct: 205 SGIHLSRFYVRDLEVNDLRYLSKETKACRDRVRM 238
>AF393487-1|AAL60412.1| 304|Anopheles gambiae odorant binding
protein 1 protein.
Length = 304
Score = 23.0 bits (47), Expect = 9.5
Identities = 9/34 (26%), Positives = 16/34 (47%)
Frame = +1
Query: 514 SFVHFESFYSRDIHNQTQKRNENETLTCKTKKKI 615
S +H FY RD+ + ET C+ + ++
Sbjct: 205 SGIHLSRFYVRDLEVNDLRYLSKETKACRDRVRM 238
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 550,351
Number of Sequences: 2352
Number of extensions: 9221
Number of successful extensions: 63
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 63
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 73177125
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -