Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0425
         (486 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    23   1.1  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    23   1.1  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    23   1.1  
AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve co...    23   1.9  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    21   7.9  

>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +3

Query: 117 GLSLGCETRGGCGIVRARSQSPSWDFL 197
           GLSLG   +GG  +    +  P W+ L
Sbjct: 266 GLSLGNAFQGGNQLANLANWGPEWNLL 292


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +3

Query: 117 GLSLGCETRGGCGIVRARSQSPSWDFL 197
           GLSLG   +GG  +    +  P W+ L
Sbjct: 267 GLSLGNAFQGGNQLANLANWGPEWNLL 293


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +3

Query: 117 GLSLGCETRGGCGIVRARSQSPSWDFL 197
           GLSLG   +GG  +    +  P W+ L
Sbjct: 267 GLSLGNAFQGGNQLANLANWGPEWNLL 293


>AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve cord
           defective protein protein.
          Length = 168

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -3

Query: 337 PESRVVEARVVVGDGEERHSRGPEH 263
           P  R V   V+V DG+   S GP+H
Sbjct: 114 PSPRRVAVPVLVRDGKPCLSGGPKH 138


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -3

Query: 178 DCERARTIPQPP 143
           DC+   TIP PP
Sbjct: 206 DCDVPSTIPPPP 217


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,526
Number of Sequences: 336
Number of extensions: 1889
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11315916
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)