Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0425
         (486 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_56387| Best HMM Match : DUF1331 (HMM E-Value=9.2)                   29   1.5  
SB_17117| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.0  
SB_4649| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   3.6  
SB_21661| Best HMM Match : EGF_CA (HMM E-Value=0)                      28   4.7  
SB_9902| Best HMM Match : EGF_CA (HMM E-Value=2.4e-18)                 28   4.7  
SB_58882| Best HMM Match : EGF_CA (HMM E-Value=0)                      28   4.7  
SB_36687| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   4.7  
SB_1582| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   4.7  
SB_24692| Best HMM Match : Disintegrin (HMM E-Value=7.6e-23)           27   8.2  
SB_11295| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   8.2  

>SB_56387| Best HMM Match : DUF1331 (HMM E-Value=9.2)
          Length = 192

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 16/34 (47%), Positives = 23/34 (67%)
 Frame = +1

Query: 145 AAVVLCELAHSRRRGTF*QNYNRILK*NDSVQQR 246
           A VV+  LA+SRRRGTF ++   IL  + ++Q R
Sbjct: 9   AGVVVAALAYSRRRGTFAESVMPILLDDVTLQTR 42


>SB_17117| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 371

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = +1

Query: 67  CLCVIISVIHHELRHRLDYPSAAKPGAAVVLCELAH 174
           C+ +I  ++HH  RH    PS+A P   +++  + H
Sbjct: 201 CIIIITVIMHHHYRHYA--PSSALPSLCIMIITVMH 234


>SB_4649| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 475

 Score = 28.3 bits (60), Expect = 3.6
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = -3

Query: 196 KKSHDGDCERARTIPQPPRVSQPRDNPTDVVAHD 95
           K +H+G+  RAR +PQ P +   +    DV+  D
Sbjct: 186 KINHEGEVNRARFMPQNPCIIATKTPSADVLVFD 219


>SB_21661| Best HMM Match : EGF_CA (HMM E-Value=0)
          Length = 1202

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = -1

Query: 282 TPGGRSTARRSVSLLYTVVLFKNSIIILLKSPTTATVSE 166
           TP GRSTAR  + +L  V L   ++I  +   T +T+S+
Sbjct: 728 TPRGRSTARAFLVILEMVSLVSLNLIADIDECTPSTISD 766


>SB_9902| Best HMM Match : EGF_CA (HMM E-Value=2.4e-18)
          Length = 258

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = -1

Query: 282 TPGGRSTARRSVSLLYTVVLFKNSIIILLKSPTTATVSE 166
           TP GRSTAR  + +L  V L   ++I  +   T +T+S+
Sbjct: 106 TPRGRSTARAFLVILEMVSLVSLNLIADIDECTPSTISD 144


>SB_58882| Best HMM Match : EGF_CA (HMM E-Value=0)
          Length = 1027

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = -1

Query: 282 TPGGRSTARRSVSLLYTVVLFKNSIIILLKSPTTATVSE 166
           TP GRSTAR  + +L  V L   ++I  +   T +T+S+
Sbjct: 142 TPRGRSTARAFLVILEMVSLVSLNLIADIDECTPSTISD 180


>SB_36687| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1115

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +1

Query: 352  CSSTPRIPDALVARCPRHMLDEHATFVLLRPGQM 453
            C+   +I DA+ A+    M DEH  +VL  P  +
Sbjct: 991  CNGLKKIEDAMKAKGKEFMWDEHLGYVLTCPSNL 1024


>SB_1582| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 141

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 18/60 (30%), Positives = 25/60 (41%)
 Frame = -1

Query: 186 TTATVSELAQYHSRPGFRSRGIIQPMS*LMMNYTYNNTETLH*RHIIEKIRKKSILITLV 7
           TT  V   + +H  P   SR I      L+ NY Y    T H R I+       IL+ ++
Sbjct: 5   TTYKVDYTSPHHYEPAKVSRHI------LVFNYNYKEATTTHCRQILAMFPMMKILVRII 58


>SB_24692| Best HMM Match : Disintegrin (HMM E-Value=7.6e-23)
          Length = 1592

 Score = 27.1 bits (57), Expect = 8.2
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +2

Query: 116  WIIPRLRNPGRLWY 157
            WI P + NPG +WY
Sbjct: 1270 WISPEMVNPGAIWY 1283


>SB_11295| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 438

 Score = 27.1 bits (57), Expect = 8.2
 Identities = 17/62 (27%), Positives = 26/62 (41%)
 Frame = +2

Query: 119 IIPRLRNPGRLWYCASSLTVAVVGLFSKIIIEFLNKTTVYNKETLRRAVLRPPGVPLLTI 298
           IIP ++   R WY A  L +   G     +I    +   ++K   RRA++      L T 
Sbjct: 318 IIPFVKRWRRFWYGAEDLALPPPGELDPDVIHLCEQFRKHHKLKCRRALVSDKRYRLRTY 377

Query: 299 SN 304
            N
Sbjct: 378 KN 379


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,449,891
Number of Sequences: 59808
Number of extensions: 264890
Number of successful extensions: 650
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 605
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 649
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1026164244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)