Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0425
         (486 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g78690.1 68414.m09172 phospholipid/glycerol acyltransferase f...   103   6e-23
At3g05510.1 68416.m00603 phospholipid/glycerol acyltransferase f...    66   9e-12
At3g05510.2 68416.m00604 phospholipid/glycerol acyltransferase f...    66   1e-11

>At1g78690.1 68414.m09172 phospholipid/glycerol acyltransferase
           family protein similar to SP|Q16635 Tafazzin from Homo
           sapiens; contains Pfam profile: PF01553 Acyltransferase
          Length = 284

 Score =  103 bits (247), Expect = 6e-23
 Identities = 46/104 (44%), Positives = 60/104 (57%), Gaps = 1/104 (0%)
 Frame = +2

Query: 176 VAVVGLFSKIIIEFLNKTTVYNKETLRRAVL-RPPGVPLLTISNHHSCFDDPGLWGXXXX 352
           +  V  F+K +    NK++V+N +TL   V  RPPGVPL+T+SNH S  DDP +WG    
Sbjct: 23  IMAVSAFAKAVANLCNKSSVHNADTLMNLVQSRPPGVPLITVSNHMSTLDDPVMWGAFKG 82

Query: 353 XXXXRESRMRWSLAAHDICLTNTLHSCFFALGKCVPVVRGAGVY 484
                    RW LAA DIC  N + S  F  GKC+P+ RG G+Y
Sbjct: 83  LLSLDPELARWVLAAEDICFRNPIFSYIFRTGKCIPITRGGGIY 126


>At3g05510.1 68416.m00603 phospholipid/glycerol acyltransferase
           family protein similar to SP|Q16635 Tafazzin from Homo
           sapiens; contains Pfam profile: PF01553 Acyltransferase
          Length = 448

 Score = 66.5 bits (155), Expect = 9e-12
 Identities = 37/114 (32%), Positives = 58/114 (50%), Gaps = 2/114 (1%)
 Frame = +2

Query: 149 LWYCASSLTVAVVGLFSKIIIEFLNKTTVYNKETLRRAVL-RPPGVPLLTISNHHSCFDD 325
           L+    ++ V ++G    + +   N+  VY  E L  A+L RP   PL+T+SNH +  DD
Sbjct: 88  LFRMLQTVAVPLIGNACHVFMNGFNRVQVYGLEKLHDALLNRPKNKPLVTVSNHVASVDD 147

Query: 326 PGLWGXXXXXXXXRESR-MRWSLAAHDICLTNTLHSCFFALGKCVPVVRGAGVY 484
           P +           ++R +RW+L A D C  N + S F    K +P+ RG G+Y
Sbjct: 148 PFVIASLLPPKFLLDARNLRWTLCATDRCFKNPVTSAFSRSVKVLPISRGEGIY 201


>At3g05510.2 68416.m00604 phospholipid/glycerol acyltransferase
           family protein similar to SP|Q16635 Tafazzin from Homo
           sapiens; contains Pfam profile: PF01553 Acyltransferase
          Length = 358

 Score = 66.1 bits (154), Expect = 1e-11
 Identities = 36/108 (33%), Positives = 56/108 (51%), Gaps = 2/108 (1%)
 Frame = +2

Query: 167 SLTVAVVGLFSKIIIEFLNKTTVYNKETLRRAVL-RPPGVPLLTISNHHSCFDDPGLWGX 343
           ++ V ++G    + +   N+  VY  E L  A+L RP   PL+T+SNH +  DDP +   
Sbjct: 4   TVAVPLIGNACHVFMNGFNRVQVYGLEKLHDALLNRPKNKPLVTVSNHVASVDDPFVIAS 63

Query: 344 XXXXXXXRESR-MRWSLAAHDICLTNTLHSCFFALGKCVPVVRGAGVY 484
                   ++R +RW+L A D C  N + S F    K +P+ RG G+Y
Sbjct: 64  LLPPKFLLDARNLRWTLCATDRCFKNPVTSAFSRSVKVLPISRGEGIY 111


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,657,657
Number of Sequences: 28952
Number of extensions: 173848
Number of successful extensions: 472
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 462
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 469
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 838967680
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)